Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G010466 Glycine max HOM05D001849 ORTHO05D004075 2.7e-46 188.3 96 100.0
Glyma.16G010400 Glycine max HOM05D001849 ORTHO05D004075 7.8e-14 80.5 39 94.9
VMungo0331G0811 Vigna mungo HOM05D001849 ORTHO05D004075 2.8e-11 72.0 37 86.5
Phvul.010G125600 Phaseolus vulgaris HOM05D001849 ORTHO05D004075 6.2e-11 70.9 39 79.5
Glyma.07G042100 Glycine max HOM05D001849 ORTHO05D004075 8.9e-10 67.0 55 63.6
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 1.5e-09 66.2 37 81.1
Lalb_Chr17g0343441 Lupinus albus HOM05D001849 ORTHO05D004075 1.5e-09 66.2 37 78.4
Lj3g0013610 Lotus japonicus HOM05D001849 ORTHO05D004075 2.6e-09 65.5 37 78.4
Lalb_Chr10g0101311 Lupinus albus HOM05D001849 ORTHO05D004075 7.6e-09 63.9 37 78.4
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 3.8e-08 61.6 42 66.7
FvH4_6g35180 Fragaria vesca HOM05D001849 ORTHO05D004075 4.9e-08 61.2 37 73.0
FAN02G1816 Fragaria x ananassa HOM05D001849 ORTHO05D004075 4.9e-08 61.2 37 73.0
FAN05G2069 Fragaria x ananassa HOM05D001849 ORTHO05D004075 4.9e-08 61.2 37 73.0
FAN09G3103 Fragaria x ananassa HOM05D001849 ORTHO05D004075 4.9e-08 61.2 37 73.0
FAN14G5889 Fragaria x ananassa HOM05D001849 ORTHO05D004075 4.9e-08 61.2 37 73.0
Oeu000390.1 Olea europaea HOM05D001849 ORTHO05D004075 6.4e-08 60.8 34 76.5
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 6.4e-08 60.8 35 77.1
Lj9C535T9 Lonicera japonica HOM05D001849 ORTHO05D004075 1.1e-07 60.1 34 79.4
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 1.4e-07 59.7 67 44.8
DCAR_026425 Daucus carota HOM05D001849 ORTHO05D004075 1.4e-07 59.7 37 70.3
MD17G1148700 Malus domestica HOM05D001849 ORTHO05D004075 1.4e-07 59.7 37 67.6
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 1.4e-07 59.7 37 73.0
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 1.9e-07 59.3 38 71.1
Solyc06g063010.4 Solanum lycopersicum HOM05D001849 ORTHO05D004075 1.9e-07 59.3 39 66.7
Sopen06g022460 Solanum pennellii HOM05D001849 ORTHO05D004075 1.9e-07 59.3 39 66.7
Cc04_g01030 Coffea canephora HOM05D001849 ORTHO05D004075 2.4e-07 58.9 36 72.2
QL05p003384 Quercus lobata HOM05D001849 ORTHO05D004075 2.4e-07 58.9 34 76.5
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 2.4e-07 58.9 37 70.3
HanXRQChr12g0360181 Helianthus annuus HOM05D001849 ORTHO05D004075 4.2e-07 58.2 43 62.8
Psat4g083360 Pisum sativum HOM05D001061 ORTHO05D006881 4.2e-07 58.2 37 67.6
Psat4g166800 Pisum sativum HOM05D001849 ORTHO05D004075 4.2e-07 58.2 37 67.6
ECA234G1749 Erigeron canadensis HOM05D001849 ORTHO05D004075 5.4e-07 57.8 39 64.1
TPR.G29998 Trifolium pratense HOM05D001849 ORTHO05D004075 5.4e-07 57.8 37 70.3
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 7.1e-07 57.4 37 67.6
unitig_747.g21722 Utricularia gibba HOM05D001849 ORTHO05D004075 7.1e-07 57.4 34 73.5
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 9.3e-07 57.0 35 68.6
Peaxi162Scf00207g01546 Petunia axillaris HOM05D001849 ORTHO05D004075 1.2e-06 56.6 34 73.5
Ciclev10024725m.g Citrus clementina HOM05D001849 ORTHO05D004075 1.6e-06 56.2 37 64.9
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla HOM05D001849 ORTHO05D004075 1.6e-06 56.2 33 78.8
MD09G1178000 Malus domestica HOM05D001849 ORTHO05D004075 1.6e-06 56.2 35 68.6
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 1.6e-06 56.2 36 69.4
MSTRG.22534 Avicennia marina HOM05D001849 ORTHO05D004075 2.1e-06 55.8 34 73.5
Nitab4.5_0002716g0060 Nicotiana tabacum HOM05D001849 ORTHO05D004075 2.1e-06 55.8 37 70.3
Nitab4.5_0003137g0070 Nicotiana tabacum HOM05D001849 ORTHO05D004075 2.1e-06 55.8 37 70.3
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 2.7e-06 55.5 34 70.6
GSVIVG01016716001 Vitis vinifera HOM05D001849 ORTHO05D004075 2.7e-06 55.5 34 70.6
HanXRQChr10g0311861 Helianthus annuus HOM05D001849 ORTHO05D004075 3.5e-06 55.1 43 62.8
TAR626G0481 Trochodendron aralioides HOM05D001849 ORTHO05D004075 3.5e-06 55.1 34 73.5
Medtr8g021980 Medicago truncatula HOM05D001849 ORTHO05D004075 4.6e-06 54.7 37 64.9
SalBow6G5403 Salvia bowleyana HOM05D001849 ORTHO05D004075 4.6e-06 54.7 37 67.6
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 4.6e-06 54.7 37 67.6
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 4.6e-06 54.7 35 65.7
Prupe.3G037300 Prunus persica HOM05D001849 ORTHO05D004075 6.0e-06 54.3 39 64.1
Thhalv10018006m.g Eutrema salsugineum HOM05D001849 ORTHO05D004075 7.8e-06 53.9 37 67.6


User provided reference genes

Program Settings