Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 1.8e-183 646.7 649 100.0
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 1.3e-157 560.8 649 91.2
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 3.1e-138 496.5 463 83.2
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 2.9e-136 490.0 460 83.0
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 2.7e-134 483.4 452 83.6
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 5.1e-133 479.2 465 81.7
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 8.7e-133 478.4 465 81.7
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 1.9e-132 477.2 447 83.0
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 1.4e-130 471.1 442 85.1
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 8.4e-128 461.8 456 80.9
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 2.8e-115 420.2 456 75.4
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 6.9e-114 415.6 460 75.0
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 1.3e-112 411.4 461 73.8
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 8.5e-112 408.7 451 74.9
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 7.2e-111 405.6 450 74.9
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 1.6e-110 404.4 457 74.0
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 3.0e-109 400.2 449 75.3
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 2.0e-108 397.5 451 74.1
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 2.2e-107 394.0 454 72.2
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 2.8e-107 393.7 450 74.0
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 1.4e-106 391.3 435 76.8
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 1.8e-106 391.0 454 73.6
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 5.3e-106 389.4 450 73.8
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 5.9e-105 386.0 450 73.3
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 2.2e-104 384.0 450 73.3
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 2.2e-104 384.0 437 74.1
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 3.8e-104 383.3 454 70.9
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 5.0e-104 382.9 450 73.1
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 5.0e-104 382.9 450 73.1
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 7.9e-102 375.6 445 72.4
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 7.9e-102 375.6 448 73.2
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 1.0e-101 375.2 436 75.5
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 6.7e-101 372.5 428 75.7
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 8.8e-101 372.1 453 71.7
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 8.8e-101 372.1 405 78.0
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 2.0e-100 370.9 402 77.4
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 2.6e-100 370.5 434 74.9
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 4.4e-100 369.8 454 70.3
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 2.4e-98 364.0 422 75.4
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 9.1e-98 362.1 466 70.4
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 1.6e-97 361.3 463 71.7
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 1.6e-97 361.3 459 69.9
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 4.5e-97 359.8 442 70.4
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 5.9e-97 359.4 463 71.3
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 7.7e-97 359.0 450 68.9
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 7.7e-97 359.0 450 69.6
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 3.2e-95 353.6 407 74.7
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 5.5e-95 352.8 406 65.3
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 5.5e-95 352.8 445 70.3
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 1.2e-94 351.7 453 68.2
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 1.2e-94 351.7 453 68.2
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 1.6e-94 351.3 450 69.6
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 2.1e-94 350.9 435 70.6
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 2.7e-94 350.5 441 71.0
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 4.7e-94 349.7 450 69.8
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 6.1e-94 349.4 449 70.6
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 6.1e-94 349.4 463 67.8
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 8.0e-94 349.0 436 70.9
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 1.4e-93 348.2 441 71.9
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 2.3e-93 347.4 416 73.1
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 5.2e-93 346.3 434 71.0
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 6.7e-93 345.9 438 71.7
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 8.8e-93 345.5 450 69.3
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 3.3e-92 343.6 438 70.3
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 4.4e-92 343.2 454 67.6
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 4.4e-92 343.2 441 70.1
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 9.7e-92 342.0 453 66.2
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 9.7e-92 342.0 411 74.9
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 2.2e-91 340.9 445 69.4
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 6.3e-91 339.3 407 75.2
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 9.1e-90 335.5 442 68.1
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 1.2e-89 335.1 416 73.3
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 5.9e-89 332.8 548 52.2
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 1.3e-88 331.6 466 65.9
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 1.7e-88 331.3 410 73.2
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 1.1e-87 328.6 396 76.3
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 1.9e-87 327.8 401 74.8
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 3.2e-87 327.0 454 67.6
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 3.4e-84 317.0 455 64.4
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 5.9e-81 306.2 397 71.8
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 1.0e-80 305.4 461 48.8
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 1.6e-78 298.1 416 69.0
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 2.7e-78 297.4 411 48.9
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 1.8e-74 284.6 448 63.2
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 5.4e-74 283.1 452 62.8
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 3.5e-73 280.4 220 62.7
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 2.3e-69 267.7 391 65.2
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 1.2e-60 238.8 189 64.0
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 8.3e-59 232.6 229 56.3
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 5.4e-58 229.9 116 94.8
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 8.1e-46 189.5 116 75.9
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 2.0e-44 184.9 407 60.9
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 7.1e-42 176.4 116 71.6
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 3.9e-40 170.6 116 71.6
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 1.9e-39 168.3 101 78.2
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 1.1e-34 152.5 105 66.7
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 7.1e-34 149.8 136 53.7
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 1.2e-33 149.1 266 76.7
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.0e-32 146.0 144 59.0
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 4.3e-31 140.6 419 53.0
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 7.1e-26 123.2 76 69.7
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 3.9e-24 117.5 74 74.3
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 5.1e-24 117.1 73 68.5
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 4.8e-22 110.5 68 69.1
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 1.1e-21 109.4 401 53.6


User provided reference genes

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