Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G223800 Glycine max HOM05D001305 ORTHO05D001934 2.5e-59 231.9 114 100.0
Glyma.19G196400 Glycine max HOM05D001305 ORTHO05D001934 3.4e-16 88.6 83 57.8
VMungo1383G1863 Vigna mungo HOM05D001305 ORTHO05D001934 6.4e-15 84.3 56 75.0
Phvul.001G192900 Phaseolus vulgaris HOM05D001305 ORTHO05D001934 1.4e-14 83.2 119 45.4
Glyma.03G198600 Glycine max HOM05D001305 ORTHO05D001934 2.4e-14 82.4 56 73.2
Lj1g0010769 Lotus japonicus HOM05D001305 ORTHO05D001934 4.3e-11 71.6 55 65.5
Ca_09027_v3 Cicer arietinum L. HOM05D001305 ORTHO05D001934 3.6e-10 68.6 56 57.1
Psat3g031200 Pisum sativum HOM05D001305 ORTHO05D001934 1.1e-09 67.0 56 57.1
Dinv21162 Davidia involucrata HOM05D001305 ORTHO05D001934 1.8e-09 66.2 59 54.2
Medtr7g105320 Medicago truncatula HOM05D001305 ORTHO05D001934 4.0e-09 65.1 99 37.4
Dinv31724 Davidia involucrata HOM05D001305 ORTHO05D001934 2.6e-08 62.4 60 51.7
Gohir.A07G111100 Gossypium hirsutum HOM05D001305 ORTHO05D001934 3.4e-08 62.0 82 50.0
Gorai.009G399200 Gossypium raimondii HOM05D001305 ORTHO05D001934 3.4e-08 62.0 109 38.5
ClCG10G018690 Citrullus lanatus HOM05D001305 ORTHO05D001934 4.5e-08 61.6 95 45.3
CANSAT64G2696 Cannabis sativa HOM05D001305 ORTHO05D001934 5.8e-08 61.2 91 45.1
Gohir.A04G059700 Gossypium hirsutum HOM05D001305 ORTHO05D001934 5.8e-08 61.2 59 55.9
Gohir.D07G114900 Gossypium hirsutum HOM05D001305 ORTHO05D001934 5.8e-08 61.2 61 59.0
Gorai.001G123100 Gossypium raimondii HOM05D001305 ORTHO05D001934 5.8e-08 61.2 61 59.0
Cfa016651 Carpinus fangiana HOM05D001305 ORTHO05D001934 7.6e-08 60.8 59 54.2
Haze_19656 Corylus avellana HOM05D001305 ORTHO05D001934 7.6e-08 60.8 97 41.2
Duzib093G0493 Durio zibethinus HOM05D001305 ORTHO05D001934 7.6e-08 60.8 59 54.2
Thecc.09G278100 Theobroma cacao HOM05D001305 ORTHO05D001934 7.6e-08 60.8 60 60.0
COL.COLO4_29666 Corchorus olitorius HOM05D001305 ORTHO05D001934 9.9e-08 60.5 59 54.2
MELO3C009497.2 Cucumis melo HOM05D001305 ORTHO05D001934 2.2e-07 59.3 59 57.6
Gohir.D04G096500 Gossypium hirsutum HOM05D001305 ORTHO05D001934 2.2e-07 59.3 109 37.6
Sed0027957 Sechium edule HOM05D001305 ORTHO05D001934 2.2e-07 59.3 92 45.7
Dinv08922 Davidia involucrata HOM05D001305 ORTHO05D001934 2.9e-07 58.9 104 33.7
Sabra06G0160300 Salix brachista HOM05D001305 ORTHO05D001934 3.8e-07 58.5 55 52.7
TWI53G0879 Tripterygium wilfordii HOM05D001305 ORTHO05D001934 4.9e-07 58.2 95 41.1
Potri.006G208400 Populus trichocarpa HOM05D001305 ORTHO05D001934 6.4e-07 57.8 60 53.3
Dinv22812 Davidia involucrata HOM05D001305 ORTHO05D001934 8.4e-07 57.4 59 50.8
Eucgr.J00526 Eucalyptus grandis HOM05D001305 ORTHO05D001934 1.1e-06 57.0 90 44.4
Gohir.D05G082200 Gossypium hirsutum HOM05D001305 ORTHO05D001934 1.1e-06 57.0 63 57.1
Ca_25954_v3 Cicer arietinum L. HOM05D001305 ORTHO05D001934 1.4e-06 56.6 56 57.1
CsaV3_3G037540 Cucumis sativus L. HOM05D001305 ORTHO05D001934 1.4e-06 56.6 59 54.2
CAN.G745.20 Capsicum annuum HOM05D001305 ORTHO05D001934 1.9e-06 56.2 59 47.5
Hma1.2p1_0820F.1_g224090 Hydrangea macrophylla HOM05D001305 ORTHO05D001934 1.9e-06 56.2 59 50.8
Ciclev10012142m.g Citrus clementina HOM05D001305 ORTHO05D001934 2.4e-06 55.8 59 47.5
Gohir.A05G079300 Gossypium hirsutum HOM05D001305 ORTHO05D001934 2.4e-06 55.8 62 56.5
Duzib128G0290 Durio zibethinus HOM05D001305 ORTHO05D001934 3.2e-06 55.5 59 49.2
CSS0023210 Camellia sinensis var. sinensis HOM05D001305 ORTHO05D001934 4.2e-06 55.1 102 35.3
Duzib168G1783 Durio zibethinus HOM05D001305 ORTHO05D001934 4.2e-06 55.1 61 55.7
Medtr1g058490 Medicago truncatula HOM05D001305 ORTHO05D001934 5.5e-06 54.7 56 55.4
Thecc.09G278000 Theobroma cacao HOM05D001305 ORTHO05D001934 5.5e-06 54.7 60 56.7
Duzib170G0799 Durio zibethinus HOM05D001305 ORTHO05D001934 7.1e-06 54.3 60 56.7
Prupe.7G100900 Prunus persica HOM05D001305 ORTHO05D001934 9.3e-06 53.9 59 52.5
Rhsim03G0069700 Rhododendron simsii HOM05D001305 ORTHO05D001934 9.3e-06 53.9 60 51.7


User provided reference genes

Program Settings