Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G197700 Glycine max HOM05D007347 ORTHO05D009296 3.8e-113 412.9 329 100.0
Glyma.15G236300 Glycine max HOM05D007347 ORTHO05D009296 1.3e-97 361.3 186 93.5
VMungo1127G1072 Vigna mungo HOM05D007347 ORTHO05D009296 3.5e-82 310.1 176 84.7
Phvul.011G207300 Phaseolus vulgaris HOM05D007347 ORTHO05D009296 1.7e-81 307.8 175 85.1
Lj3g0007423 Lotus japonicus HOM05D007347 ORTHO05D009296 2.5e-80 303.9 329 69.3
Lalb_Chr19g0132391 Lupinus albus HOM05D007347 ORTHO05D009296 1.7e-76 291.2 190 73.2
TPR.G30433 Trifolium pratense HOM05D007347 ORTHO05D009296 1.6e-66 258.1 181 67.4
Psat4g145840 Pisum sativum HOM05D007347 ORTHO05D009296 3.5e-66 256.9 178 69.7
QL06p007153 Quercus lobata HOM05D007347 ORTHO05D009296 8.6e-65 252.3 188 64.9
FAN23G0923 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.1e-64 251.9 181 68.0
FAN26G2104 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.1e-64 251.9 181 68.0
CiPaw.03G007800 Carya illinoinensis HOM05D007347 ORTHO05D009296 2.5e-64 250.8 183 67.2
FvH4_1g20970 Fragaria vesca HOM05D007347 ORTHO05D009296 2.5e-64 250.8 181 68.0
FAN23G0930 Fragaria x ananassa HOM05D007347 ORTHO05D009296 3.3e-64 250.4 181 67.4
Prupe.6G186200 Prunus persica HOM05D007347 ORTHO05D009296 9.5e-64 248.8 182 68.1
RcHm_v2.0_Chr2g0114451 Rosa chinensis HOM05D007347 ORTHO05D009296 1.2e-63 248.4 183 66.7
Dinv34879 Davidia involucrata HOM05D007347 ORTHO05D009296 1.6e-63 248.1 189 67.7
FAN19G1358 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.6e-63 248.1 181 67.4
RcHm_v2.0_Chr6g0269561 Rosa chinensis HOM05D007347 ORTHO05D009296 3.6e-63 246.9 185 65.4
Medtr8g039270 Medicago truncatula HOM05D007347 ORTHO05D009296 1.4e-62 245.0 184 63.6
MD15G1324700 Malus domestica HOM05D007347 ORTHO05D009296 1.8e-62 244.6 182 65.9
MELO3C026797.2 Cucumis melo HOM05D007347 ORTHO05D009296 7.5e-61 239.2 183 65.6
ClCG11G001180 Citrullus lanatus HOM05D007347 ORTHO05D009296 4.9e-60 236.5 183 65.6
TWI15G0869 Tripterygium wilfordii HOM05D007347 ORTHO05D009296 4.9e-60 236.5 186 65.6
CsaV3_5G013240 Cucumis sativus L. HOM05D007347 ORTHO05D009296 1.8e-59 234.6 183 65.0
CSS0000287 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 1.2e-58 231.9 182 65.9
CSS0049471 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 1.2e-58 231.9 182 65.9
Actinidia18106 Actinidia chinensis HOM05D007347 ORTHO05D009296 7.8e-58 229.2 190 62.6
Sed0006376 Sechium edule HOM05D007347 ORTHO05D009296 3.9e-57 226.9 183 63.4
CANSAT64G0714 Cannabis sativa HOM05D007347 ORTHO05D009296 8.6e-57 225.7 185 60.5
Lj4P128T51 Lonicera japonica HOM05D007347 ORTHO05D009296 2.5e-56 224.2 188 63.3
Haze_14081 Corylus avellana HOM05D007347 ORTHO05D009296 4.3e-56 223.4 175 63.4
Cc07_g04830 Coffea canephora HOM05D007347 ORTHO05D009296 5.6e-56 223.0 188 60.1
TAR371G0226 Trochodendron aralioides HOM05D007347 ORTHO05D009296 2.1e-55 221.1 185 58.4
TAR629G3514 Trochodendron aralioides HOM05D007347 ORTHO05D009296 2.1e-55 221.1 185 58.4
Cfa007995 Carpinus fangiana HOM05D007347 ORTHO05D009296 3.6e-55 220.3 165 66.1
Hma1.2p1_1364F.1_g278380 Hydrangea macrophylla HOM05D007347 ORTHO05D009296 3.6e-55 220.3 179 63.1
Duzib138G0808 Durio zibethinus HOM05D007347 ORTHO05D009296 5.2e-54 216.5 180 58.3
Gohir.D02G204900 Gossypium hirsutum HOM05D007347 ORTHO05D009296 8.9e-54 215.7 183 57.9
MSTRG.24902 Avicennia marina HOM05D007347 ORTHO05D009296 9.8e-53 212.2 186 58.6
Gorai.005G232200 Gossypium raimondii HOM05D007347 ORTHO05D009296 2.9e-52 210.7 180 57.2
Peaxi162Scf00004g02628 Petunia axillaris HOM05D007347 ORTHO05D009296 2.9e-52 210.7 180 58.3
Ciclev10011342m.g Citrus clementina HOM05D007347 ORTHO05D009296 6.4e-52 209.5 182 58.2
Sopen04g021380 Solanum pennellii HOM05D007347 ORTHO05D009296 6.4e-52 209.5 178 58.4
Nitab4.5_0007154g0010 Nicotiana tabacum HOM05D007347 ORTHO05D009296 5.4e-51 206.5 180 57.8
Cpa.g.sc16.131 Carica papaya HOM05D007347 ORTHO05D009296 9.2e-51 205.7 171 59.1
Lsat_1_v5_gn_2_86161 Lactuca sativa HOM05D007347 ORTHO05D009296 9.2e-51 205.7 185 56.8
Thecc.04G145700 Theobroma cacao HOM05D007347 ORTHO05D009296 9.2e-51 205.7 177 58.8
Gohir.A03G183300 Gossypium hirsutum HOM05D007347 ORTHO05D009296 1.2e-50 205.3 180 57.2
Solyc04g050550.3 Solanum lycopersicum HOM05D007347 ORTHO05D009296 6.0e-50 203.0 176 57.4
Manes.18G103700 Manihot esculenta HOM05D007347 ORTHO05D009296 1.3e-49 201.8 158 63.3
Migut.H00560 Erythranthe guttata HOM05D007347 ORTHO05D009296 2.3e-49 201.1 185 55.7
SalBow1G8225 Salvia bowleyana HOM05D007347 ORTHO05D009296 2.3e-49 201.1 180 55.0
SGA_v2.0_scaffold204G41666 Striga asiatica HOM05D007347 ORTHO05D009296 2.3e-49 201.1 185 53.0
CAN.G71.18 Capsicum annuum HOM05D007347 ORTHO05D009296 3.9e-49 200.3 181 55.8
Potri.017G108600 Populus trichocarpa HOM05D007347 ORTHO05D009296 5.6e-48 196.4 185 56.2
GSVIVG01036486001 Vitis vinifera HOM05D007347 ORTHO05D009296 7.3e-48 196.1 165 61.2
MBI03_g44527_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 2.8e-47 194.1 172 55.2
Sc10g0001490 Simmondsia chinensis HOM05D007347 ORTHO05D009296 6.2e-47 193.0 190 51.1
Eucgr.I02100 Eucalyptus grandis HOM05D007347 ORTHO05D009296 8.1e-47 192.6 167 59.3
HanXRQChr14g0448021 Helianthus annuus HOM05D007347 ORTHO05D009296 8.1e-47 192.6 179 57.0
Ah.16g102100 Amaranthus hybridus HOM05D007347 ORTHO05D009296 2.3e-46 191.0 187 51.3
FAN28G0832 Fragaria x ananassa HOM05D007347 ORTHO05D009296 4.0e-46 190.3 177 57.6
AUR62019500 Chenopodium quinoa HOM05D007347 ORTHO05D009296 1.2e-45 188.7 187 49.7
Sabra17G0091200 Salix brachista HOM05D007347 ORTHO05D009296 7.5e-45 186.0 181 54.1
Nn3g18549 Nelumbo nucifera HOM05D007347 ORTHO05D009296 2.2e-44 184.5 172 51.7
PSO782G5207 Papaver somniferum HOM05D007347 ORTHO05D009296 1.9e-43 181.4 172 52.3
Aqoxy3G04330 Aquilegia oxysepala HOM05D007347 ORTHO05D009296 3.2e-43 180.6 165 55.8
Manes.02G063016 Manihot esculenta HOM05D002460 ORTHO05D002716 3.5e-42 177.2 159 58.5
Thhalv10028323m.g Eutrema salsugineum HOM05D007347 ORTHO05D009296 1.7e-41 174.9 180 53.9
ATR0124G035 Amborella trichopoda HOM05D007347 ORTHO05D009296 5.1e-41 173.3 181 45.9
AT5G38730 Arabidopsis thaliana HOM05D007347 ORTHO05D009296 8.6e-41 172.6 182 54.4
BcaC02g09666 Brassica carinata HOM05D007347 ORTHO05D009296 1.9e-40 171.4 192 49.0
C04p45350 Brassica napus HOM05D007347 ORTHO05D009296 1.9e-40 171.4 192 49.0
BolC4t26117H Brassica oleracea HOM05D007347 ORTHO05D009296 1.9e-40 171.4 192 49.0
BraA04t16830Z Brassica rapa HOM05D007347 ORTHO05D009296 2.8e-39 167.5 188 49.5
SpUn0124_0020 Schrenkiella parvula HOM05D007347 ORTHO05D009296 1.8e-38 164.9 176 52.8
SpUn0185_0030 Schrenkiella parvula HOM05D007347 ORTHO05D009296 1.8e-38 164.9 176 52.8
AL7G51690 Arabidopsis lyrata HOM05D007347 ORTHO05D009296 2.3e-38 164.5 175 53.7
A04p11620 Brassica napus HOM05D007347 ORTHO05D009296 3.1e-38 164.1 188 48.4
THA.LOC104805542 Tarenaya hassleriana HOM05D007347 ORTHO05D009296 3.1e-38 164.1 178 51.1
BcaB06g27240 Brassica carinata HOM05D007347 ORTHO05D009296 2.0e-37 161.4 187 48.1
Carub.0007s3713 Capsella rubella HOM05D007347 ORTHO05D009296 2.6e-37 161.0 175 52.0
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 3.4e-37 160.6 171 52.0
Aa31LG9G16920 Aethionema arabicum HOM05D007347 ORTHO05D009296 1.7e-36 158.3 165 53.3
COL.COLO4_23655 Corchorus olitorius HOM05D007347 ORTHO05D009296 3.2e-35 154.1 111 66.7
Ca_23964_v3 Cicer arietinum L. HOM05D007347 ORTHO05D009296 1.1e-32 145.6 90 77.8
Atru.chr10.1870 Acer truncatum HOM05D007347 ORTHO05D009296 3.3e-32 144.1 182 42.3
ECA238G4434 Erigeron canadensis HOM05D007347 ORTHO05D009296 2.8e-31 141.0 107 65.4
AUR62036136 Chenopodium quinoa HOM05D007347 ORTHO05D009296 2.4e-30 137.9 111 59.5
MBI03_g13436_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 4.2e-27 127.1 98 60.2
Thecc.07G187000 Theobroma cacao HOM05D007291 ORTHO05D009038 4.2e-11 73.9 190 30.5
Rhsim10G0062500 Rhododendron simsii HOM05D007347 ORTHO05D009296 1.6e-10 72.0 52 69.2
Hund04386 Selenicereus undatus HOM05D006931 ORTHO05D008782 3.0e-09 67.8 184 28.8
PGR102G2888 Punica granatum HOM05D007455 ORTHO05D009431 4.3e-08 63.9 157 27.4
QL04p014212 Quercus lobata HOM05D007455 ORTHO05D009431 4.3e-08 63.9 121 28.1
Hund23024 Selenicereus undatus HOM05D006931 ORTHO05D008782 4.3e-08 63.9 189 28.0
Aa31LG5G12250 Aethionema arabicum HOM05D006931 ORTHO05D008782 7.4e-08 63.2 185 27.0
Prupe.2G064100 Prunus persica HOM05D002890 ORTHO05D009847 1.3e-07 62.4 185 25.9
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 1.3e-07 62.4 168 30.4
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 2.1e-07 61.6 165 27.9
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 2.1e-07 61.6 165 27.9
Sp7g24650 Schrenkiella parvula HOM05D006931 ORTHO05D008782 2.1e-07 61.6 184 26.6
SEGI_11241 Sequoiadendron giganteum HOM05D007496 ORTHO05D009479 2.1e-07 61.6 179 24.6
A01p17940 Brassica napus HOM05D003050 ORTHO05D003513 2.8e-07 61.2 184 25.5
BraA01t01749Z Brassica rapa HOM05D003050 ORTHO05D003513 3.7e-07 60.8 184 26.1
CiPaw.03G073600 Carya illinoinensis HOM05D007545 ORTHO05D009579 4.8e-07 60.5 170 28.8
Actinidia09786 Actinidia chinensis HOM05D006931 ORTHO05D008782 6.2e-07 60.1 184 26.1
SEGI_00853 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 6.2e-07 60.1 162 27.8
SEGI_32122 Sequoiadendron giganteum HOM05D007291 ORTHO05D009038 6.2e-07 60.1 190 25.3
C01p22740 Brassica napus HOM05D003050 ORTHO05D003513 1.1e-06 59.3 184 24.5
Carub.0007s1417 Capsella rubella HOM05D006931 ORTHO05D008782 1.1e-06 59.3 184 24.5
FAN05G5053 Fragaria x ananassa HOM05D006931 ORTHO05D008782 1.1e-06 59.3 184 25.0
SEGI_16669 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 1.4e-06 58.9 188 23.4
CARHR283670 Cardamine hirsuta HOM05D007347 ORTHO05D009296 1.8e-06 58.5 44 56.8
Nn1g03517 Nelumbo nucifera HOM05D002890 ORTHO05D009847 1.8e-06 58.5 184 23.4
AT4G26680 Arabidopsis thaliana HOM05D006931 ORTHO05D008782 2.4e-06 58.2 184 24.5
BcaC09g50628 Brassica carinata HOM05D006931 ORTHO05D008782 2.4e-06 58.2 184 24.5
BolC1t02203H Brassica oleracea HOM05D003050 ORTHO05D003513 2.4e-06 58.2 184 24.5
CDE05G1387 Ceratophyllum demersum HOM05D007347 ORTHO05D009296 2.4e-06 58.2 47 51.1
Thhalv10024897m.g Eutrema salsugineum HOM05D006931 ORTHO05D008782 3.1e-06 57.8 184 25.0
MD17G1268500 Malus domestica HOM05D007545 ORTHO05D009579 3.1e-06 57.8 180 26.1
BcaC09g52253 Brassica carinata HOM05D006931 ORTHO05D008782 4.0e-06 57.4 187 25.7
Peaxi162Scf00802g00211 Petunia axillaris HOM05D006931 ORTHO05D008782 4.0e-06 57.4 185 25.9
Peaxi162Scf70695g00002 Petunia axillaris HOM05D006931 ORTHO05D008782 4.0e-06 57.4 185 25.9
AL7G26160 Arabidopsis lyrata HOM05D006931 ORTHO05D008782 5.3e-06 57.0 172 25.6
CSS0032219 Camellia sinensis var. sinensis HOM05D006931 ORTHO05D008782 6.9e-06 56.6 185 23.8
CSS0037608 Camellia sinensis var. sinensis HOM05D006931 ORTHO05D008782 6.9e-06 56.6 185 23.8
Oeu033427.1 Olea europaea HOM05D007347 ORTHO05D009296 6.9e-06 56.6 39 66.7
Oeu064824.1 Olea europaea HOM05D006888 ORTHO05D008371 6.9e-06 56.6 149 24.2
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 9.0e-06 56.2 123 30.1


User provided reference genes

Program Settings