Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G197200 Glycine max HOM05D006097 ORTHO05D008538 0.0e+00 1161.7 579 100.0
Lj3g0013868 Lotus japonicus HOM05D006097 ORTHO05D008538 7.4e-285 983.4 582 84.9
Lalb_Chr19g0132421 Lupinus albus HOM05D006097 ORTHO05D008538 6.3e-268 927.2 573 80.6
Phvul.011G206500 Phaseolus vulgaris HOM05D006097 ORTHO05D008538 7.2e-264 913.7 518 87.5
TPR.G17806 Trifolium pratense HOM05D006097 ORTHO05D008538 1.5e-261 906.0 569 78.4
Medtr3g014750 Medicago truncatula HOM05D006097 ORTHO05D008538 3.4e-261 904.8 578 77.9
Psat5g221440 Pisum sativum HOM05D006097 ORTHO05D008538 3.6e-255 884.8 569 75.9
arahy.Tifrunner.gnm1.ann1.HF4B4K Arachis hypogaea HOM05D006097 ORTHO05D008538 5.7e-253 877.5 612 73.0
Haze_03039 Corylus avellana HOM05D006097 ORTHO05D008538 3.0e-241 838.6 539 74.2
QL04p017855 Quercus lobata HOM05D006097 ORTHO05D008538 3.6e-239 831.6 586 70.6
Cfa010917 Carpinus fangiana HOM05D006097 ORTHO05D008538 3.7e-236 821.6 570 70.5
CiPaw.14G007600 Carya illinoinensis HOM05D006097 ORTHO05D008538 1.4e-235 819.7 565 70.3
GSVIVG01013488001 Vitis vinifera HOM05D006097 ORTHO05D008538 6.0e-234 814.3 571 70.1
Dinv22036 Davidia involucrata HOM05D006097 ORTHO05D008538 7.8e-234 813.9 572 69.6
Ciclev10004623m.g Citrus clementina HOM05D006097 ORTHO05D008538 1.1e-230 803.5 578 68.2
Prupe.2G036100 Prunus persica HOM05D006097 ORTHO05D008538 2.6e-229 798.9 558 70.3
Actinidia21518 Actinidia chinensis HOM05D006097 ORTHO05D008538 1.3e-228 796.6 573 68.6
Atru.chr7.628 Acer truncatum HOM05D006097 ORTHO05D008538 2.2e-228 795.8 573 68.6
COL.COLO4_20657 Corchorus olitorius HOM05D006097 ORTHO05D008538 7.1e-227 790.8 574 66.7
Gohir.A06G175000 Gossypium hirsutum HOM05D006097 ORTHO05D008538 8.6e-225 783.9 576 66.8
Gohir.D06G184900 Gossypium hirsutum HOM05D006097 ORTHO05D008538 1.1e-224 783.5 576 67.0
MD07G1040200 Malus domestica HOM05D006097 ORTHO05D008538 1.5e-224 783.1 579 68.4
Gorai.010G216200 Gossypium raimondii HOM05D006097 ORTHO05D008538 5.6e-224 781.2 578 67.0
PSO339G1331 Papaver somniferum HOM05D006097 ORTHO05D008538 8.1e-223 777.3 574 65.9
Hund13358 Selenicereus undatus HOM05D006097 ORTHO05D008538 1.4e-222 776.5 562 67.3
RcHm_v2.0_Chr1g0324291 Rosa chinensis HOM05D006097 ORTHO05D008538 2.4e-222 775.8 575 67.7
CANSAT56G2143 Cannabis sativa HOM05D006097 ORTHO05D008538 1.2e-221 773.5 571 65.8
Thecc.10G154600 Theobroma cacao HOM05D006097 ORTHO05D008538 4.4e-221 771.5 574 66.0
Nn2g14836 Nelumbo nucifera HOM05D006097 ORTHO05D008538 1.4e-219 766.5 551 68.2
Peaxi162Scf00767g00518 Petunia axillaris HOM05D006097 ORTHO05D008538 1.4e-219 766.5 543 67.8
THA.LOC104826726 Tarenaya hassleriana HOM05D006097 ORTHO05D008538 1.9e-219 766.1 575 65.4
Manes.04G159300 Manihot esculenta HOM05D006097 ORTHO05D008538 4.2e-219 765.0 582 65.3
Duzib114G0946 Durio zibethinus HOM05D006097 ORTHO05D008538 3.5e-218 761.9 576 65.5
arahy.Tifrunner.gnm1.ann1.RMFD7W Arachis hypogaea HOM05D006097 ORTHO05D008538 1.7e-217 759.6 600 66.7
FAN01G0546 Fragaria x ananassa HOM05D006097 ORTHO05D008538 2.3e-217 759.2 564 66.7
Glyma.15G235400 Glycine max HOM05D006097 ORTHO05D008538 1.1e-216 756.9 522 76.2
Nitab4.5_0001621g0010 Nicotiana tabacum HOM05D006097 ORTHO05D008538 1.5e-216 756.5 564 65.6
CsaV3_5G036770 Cucumis sativus L. HOM05D006097 ORTHO05D008538 3.3e-216 755.4 537 68.0
BraA04t16135Z Brassica rapa HOM05D006097 ORTHO05D008538 7.3e-216 754.2 573 64.9
A04p04190 Brassica napus HOM05D006097 ORTHO05D008538 1.3e-215 753.4 573 65.1
BcaB02g08396 Brassica carinata HOM05D006097 ORTHO05D008538 3.6e-215 751.9 573 64.9
Potri.003G196300 Populus trichocarpa HOM05D006097 ORTHO05D008538 8.1e-215 750.7 574 65.3
C04p36530 Brassica napus HOM05D006097 ORTHO05D008538 1.1e-214 750.4 574 64.6
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 9.0e-214 747.3 556 66.2
BcaC02g09793 Brassica carinata HOM05D006097 ORTHO05D008538 1.5e-213 746.5 574 64.3
CAN.G176.2 Capsicum annuum HOM05D006097 ORTHO05D008538 5.8e-213 744.6 574 63.2
Sopen08g005450 Solanum pennellii HOM05D006097 ORTHO05D008538 9.9e-213 743.8 578 63.1
Ah.12g062830 Amaranthus hybridus HOM05D006097 ORTHO05D008538 1.7e-212 743.0 563 63.9
Thhalv10010237m.g Eutrema salsugineum HOM05D006097 ORTHO05D008538 2.2e-212 742.7 573 63.9
PGR031G1965 Punica granatum HOM05D006097 ORTHO05D008538 2.9e-212 742.3 569 64.5
ECA236G3136 Erigeron canadensis HOM05D006097 ORTHO05D008538 4.9e-212 741.5 536 65.5
BolC4t25143H Brassica oleracea HOM05D006097 ORTHO05D008538 1.9e-211 739.6 592 62.7
Carub.0005s2263 Capsella rubella HOM05D006097 ORTHO05D008538 1.2e-210 736.9 580 63.3
Migut.N01845 Erythranthe guttata HOM05D006097 ORTHO05D008538 1.2e-210 736.9 549 64.7
AL5G37140 Arabidopsis lyrata HOM05D006097 ORTHO05D008538 2.1e-210 736.1 576 63.9
Sp5g06630 Schrenkiella parvula HOM05D006097 ORTHO05D008538 4.6e-210 734.9 573 63.2
SGA_v2.0_scaffold232G43504 Striga asiatica HOM05D006097 ORTHO05D008538 1.0e-209 733.8 535 66.7
AUR62032650 Chenopodium quinoa HOM05D006097 ORTHO05D008538 1.3e-209 733.4 559 63.3
Lsat_1_v5_gn_7_31901 Lactuca sativa HOM05D006097 ORTHO05D004880 2.5e-208 729.2 552 63.0
Aqoxy2G00367 Aquilegia oxysepala HOM05D006097 ORTHO05D008538 4.3e-208 728.4 514 68.3
HanXRQChr04g0113861 Helianthus annuus HOM05D006097 ORTHO05D008538 4.3e-208 728.4 551 63.7
Aa31LG10G10820 Aethionema arabicum HOM05D006097 ORTHO05D008538 1.3e-207 726.9 582 62.7
Sabra03G0146400 Salix brachista HOM05D006097 ORTHO05D008538 1.6e-207 726.5 614 60.4
ATR0745G019 Amborella trichopoda HOM05D006097 ORTHO05D008538 8.1e-207 724.2 537 64.8
SalBow6G4726 Salvia bowleyana HOM05D006097 ORTHO05D008538 1.1e-206 723.8 556 63.8
Cc02_g30220 Coffea canephora HOM05D006097 ORTHO05D008538 6.9e-206 721.1 537 64.6
ClCG05G026810 Citrullus lanatus HOM05D006097 ORTHO05D008538 7.6e-205 717.6 544 64.9
AUR62026861 Chenopodium quinoa HOM05D006097 ORTHO05D008538 4.2e-203 711.8 563 61.6
CARHR165960 Cardamine hirsuta HOM05D006097 ORTHO05D008538 1.3e-201 706.8 570 62.1
CSS0004732 Camellia sinensis var. sinensis HOM05D006097 ORTHO05D008538 1.8e-201 706.4 543 64.6
EL10Ac2g02801 Beta vulgaris HOM05D006097 ORTHO05D008538 1.3e-199 700.3 643 55.8
Eucgr.G03235 Eucalyptus grandis HOM05D006097 ORTHO05D008538 1.1e-195 687.2 577 61.0
Os01g0952700 Oryza sativa ssp. japonica HOM05D006097 ORTHO05D008538 1.9e-192 676.4 541 59.5
Hma1.2p1_1627F.1_g294440 Hydrangea macrophylla HOM05D006097 ORTHO05D008538 1.7e-188 663.3 463 68.9
HPP92_013975 Vanilla planifolia HOM05D006097 ORTHO05D008538 3.8e-188 662.1 536 59.7
PGSC0003DMG400025223 Solanum tuberosum HOM05D006097 ORTHO05D008538 2.1e-186 656.4 460 67.4
Sc07g0002170 Simmondsia chinensis HOM05D006097 ORTHO05D008538 1.3e-185 653.7 462 66.7
Solyc08g014470.4 Solanum lycopersicum HOM05D006097 ORTHO05D008538 2.5e-184 649.4 460 67.2
SEGI_19069 Sequoiadendron giganteum HOM05D006097 ORTHO05D008538 4.3e-184 648.7 536 58.8
DCAR_031244 Daucus carota HOM05D006097 ORTHO05D008538 6.3e-175 618.2 460 64.1
MELO3C012474.2 Cucumis melo HOM05D006097 ORTHO05D008538 1.1e-171 607.4 459 66.4
Rhsim01G0124100 Rhododendron simsii HOM05D005112 ORTHO05D006681 7.9e-170 601.3 534 59.4
AT3G55850 Arabidopsis thaliana HOM05D006097 ORTHO05D008538 1.3e-167 594.0 462 63.9
QL04p017846 Quercus lobata HOM05D006097 ORTHO05D008538 1.1e-166 590.9 395 72.2
Sed0002543 Sechium edule HOM05D006097 ORTHO05D008538 5.3e-166 588.6 576 54.3
Hma1.2p1_1627F.1_g294450 Hydrangea macrophylla HOM05D006097 ORTHO05D008538 9.1e-166 587.8 463 63.3
MBI19_g07612_MAGBIO Magnolia biondii HOM05D006097 ORTHO05D008538 1.0e-161 574.3 527 56.9
unitig_52.g17390 Utricularia gibba HOM05D006097 ORTHO05D008538 4.1e-158 562.4 511 57.3
Mapoly0021s0162 Marchantia polymorpha HOM05D006097 ORTHO05D008538 1.0e-153 547.7 571 48.2
SMO367G1089 Selaginella moellendorffii HOM05D006097 ORTHO05D008538 5.4e-150 535.4 561 48.7
AagrBONN_evm.TU.Sc2ySwM_340.253 Anthoceros agrestis HOM05D006097 ORTHO05D008538 5.9e-149 531.9 530 49.4
TAR623G0406 Trochodendron aralioides HOM05D006097 ORTHO05D008538 6.8e-145 518.5 349 71.6
Pp3c20_1490 Physcomitrium patens HOM05D006097 ORTHO05D008538 2.4e-142 510.0 534 48.5
Ca_26912_v3 Cicer arietinum L. HOM05D006097 ORTHO05D008538 1.2e-138 497.7 296 78.7
VMungo1127G1698 Vigna mungo HOM05D006097 ORTHO05D008538 1.2e-138 497.7 293 85.7
AUR62037188 Chenopodium quinoa HOM05D006097 ORTHO05D008538 2.0e-136 490.3 395 61.3
Oeu048573.1 Olea europaea HOM05D006097 ORTHO05D008538 4.9e-127 459.1 350 62.9
FAN06G0154 Fragaria x ananassa HOM05D005112 ORTHO05D006681 2.5e-115 420.2 540 44.4
CDE06G1230 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 6.2e-114 415.6 354 57.9
vmacro12697 Vaccinium macrocarpon HOM05D006097 ORTHO05D008538 3.4e-104 383.3 266 69.5
Thhalv10010899m.g Eutrema salsugineum HOM05D006097 ORTHO05D008538 2.7e-101 373.6 305 60.0
VMungo1127G1548 Vigna mungo HOM05D006097 ORTHO05D008538 3.8e-95 353.2 218 80.3
FAN10G0529 Fragaria x ananassa HOM05D006097 ORTHO05D008538 4.6e-93 346.3 693 35.4
Lj9A654G51 Lonicera japonica HOM05D006097 ORTHO05D008538 4.6e-93 346.3 239 69.5
SMO367G0062 Selaginella moellendorffii HOM05D006097 ORTHO05D005621 2.5e-91 340.5 538 40.3
Zm00001eb140700 Zea mays HOM05D006097 ORTHO05D008538 1.8e-84 317.8 249 60.6
MCO06G284 Micromonas commoda HOM05D006097 ORTHO05D008538 6.2e-82 309.3 581 34.8
Cre06.g279350 Chlamydomonas reinhardtii HOM05D006097 ORTHO05D008538 1.2e-69 268.5 457 37.6
SMO343G0029 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 6.9e-65 252.7 522 36.0
TAR623G0702 Trochodendron aralioides HOM05D006097 ORTHO05D008538 6.9e-65 252.7 196 62.2
Lj9A654T55 Lonicera japonica HOM05D006097 ORTHO05D008538 6.1e-53 213.0 140 71.4
QL04p017840 Quercus lobata HOM05D006097 ORTHO05D008538 2.2e-50 204.5 123 77.2
Pp3s32_630 Physcomitrium patens HOM05D006097 ORTHO05D008538 7.0e-49 199.5 524 30.0
Cre07.g313350 Chlamydomonas reinhardtii HOM05D006097 ORTHO05D008538 5.9e-48 196.4 534 28.5
PRCOL_00006109 Prasinoderma coloniale HOM05D006097 ORTHO05D008538 2.2e-47 194.5 400 35.0
Ca_03883_v3 Cicer arietinum L. HOM05D006097 ORTHO05D008538 5.5e-38 163.3 97 79.4
Nn2g16009 Nelumbo nucifera HOM05D006097 ORTHO05D008538 7.5e-27 126.3 90 64.4
CDE06G0927 Ceratophyllum demersum HOM05D006097 ORTHO05D020391 2.4e-25 121.3 136 51.5
Medtr1224s0010 Medicago truncatula HOM05D006097 ORTHO05D008538 1.5e-22 112.1 576 25.7
DCAR_031243 Daucus carota HOM05D006097 ORTHO05D020391 1.6e-21 108.6 116 50.9
SMO197G0087 Selaginella moellendorffii HOM05D003320 ORTHO05D003941 8.0e-21 106.3 122 48.4
SMO274G0019 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 8.9e-20 102.8 111 49.5
CDE06G2151 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 3.4e-19 100.9 82 59.8
SEGI_33421 Sequoiadendron giganteum HOM05D006097 ORTHO05D020391 9.8e-19 99.4 74 64.9
SMO009G0029 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 2.4e-17 94.7 122 44.3
SMO212G0005 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 4.1e-17 94.0 115 45.2
SMO125G0001 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 5.4e-17 93.6 114 45.6
Carub.0002s2671 Capsella rubella HOM05D006097 ORTHO05D008538 3.5e-16 90.9 58 62.1
RcHm_v2.0_Chr6g0254811 Rosa chinensis HOM05D006097 ORTHO05D020391 6.6e-15 86.7 55 69.1
SMO005G0015 Selaginella moellendorffii HOM05D006097 ORTHO05D011308 6.6e-15 86.7 105 44.8
Nn313s46297 Nelumbo nucifera HOM05D006097 ORTHO05D008538 6.4e-10 70.1 45 75.6
CDE06G1678 Ceratophyllum demersum HOM05D006097 ORTHO05D008538 7.0e-09 66.6 53 58.5


User provided reference genes

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