Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 1.8e-34 148.7 75 100.0
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 3.0e-29 131.3 68 97.1
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 2.6e-28 128.3 68 95.6
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 4.8e-27 124.0 68 91.2
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 1.1e-26 122.9 68 88.2
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 1.4e-26 122.5 68 88.2
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 2.4e-26 121.7 68 86.8
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 2.6e-25 118.2 68 86.8
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 5.9e-25 117.1 68 86.8
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 1.3e-24 115.9 68 86.8
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 1.7e-24 115.5 68 85.3
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 2.2e-24 115.2 73 75.3
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 2.2e-24 115.2 66 84.8
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 1.4e-23 112.5 68 79.4
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 1.9e-23 112.1 73 76.7
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 1.9e-23 112.1 73 76.7
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 2.5e-23 111.7 68 77.9
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 2.5e-23 111.7 68 83.8
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 3.2e-23 111.3 68 79.4
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 4.2e-23 110.9 68 82.4
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 7.2e-23 110.2 73 74.0
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 9.4e-23 109.8 68 77.9
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 9.4e-23 109.8 73 75.3
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 1.6e-22 109.0 68 77.9
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 1.6e-22 109.0 68 79.4
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 4.7e-22 107.5 73 72.6
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 1.4e-21 105.9 68 73.5
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 3.9e-21 104.4 73 72.6
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 3.9e-21 104.4 65 80.0
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 5.2e-21 104.0 73 69.9
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 6.7e-21 103.6 73 68.5
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 6.7e-21 103.6 73 72.6
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 6.7e-21 103.6 68 75.0
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 8.8e-21 103.2 63 76.2
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.1e-20 102.8 68 70.6
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 1.1e-20 102.8 73 69.9
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.5e-20 102.4 68 73.5
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 1.5e-20 102.4 68 72.1
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 1.5e-20 102.4 68 76.5
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.5e-20 102.4 68 76.5
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.6e-20 101.7 70 74.3
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 2.6e-20 101.7 68 76.5
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 2.6e-20 101.7 66 74.2
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 5.7e-20 100.5 68 72.1
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 7.4e-20 100.1 68 73.5
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 7.4e-20 100.1 73 68.5
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 1.3e-19 99.4 68 70.6
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.3e-19 99.4 73 67.1
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.3e-19 99.4 68 70.6
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 1.3e-19 99.4 68 70.6
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 1.3e-19 99.4 68 70.6
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 1.7e-19 99.0 68 70.6
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 2.2e-19 98.6 63 74.6
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 2.8e-19 98.2 63 77.8
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 2.8e-19 98.2 63 77.8
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 4.8e-19 97.4 68 69.1
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 4.8e-19 97.4 68 69.1
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 4.8e-19 97.4 68 69.1
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 6.3e-19 97.1 69 71.0
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.8e-18 95.5 68 67.6
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 1.8e-18 95.5 68 67.6
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 1.8e-18 95.5 68 67.6
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 2.4e-18 95.1 67 65.7
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 2.4e-18 95.1 68 69.1
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 5.3e-18 94.0 60 75.0
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 9.1e-18 93.2 73 61.6
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 9.1e-18 93.2 68 67.6
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 1.2e-17 92.8 79 59.5
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 1.2e-17 92.8 68 66.2
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 2.6e-17 91.7 68 67.6
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 5.9e-17 90.5 68 64.7
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 6.5e-16 87.0 68 66.2
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 2.5e-15 85.1 68 63.2
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 5.5e-15 84.0 68 64.7
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 7.2e-15 83.6 59 72.9
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 1.6e-14 82.4 73 54.8
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 2.7e-14 81.6 68 58.8
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 2.7e-14 81.6 68 58.8
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 2.7e-14 81.6 68 58.8
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 2.7e-14 81.6 68 58.8
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 2.7e-14 81.6 68 58.8
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 6.1e-14 80.5 68 58.8
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 8.0e-14 80.1 68 57.4
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 1.0e-13 79.7 68 57.4
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 1.4e-13 79.3 68 57.4
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 1.8e-13 79.0 68 57.4
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 4.0e-13 77.8 68 58.8
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 6.8e-13 77.0 68 57.4
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 6.8e-13 77.0 68 55.9
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 3.4e-12 74.7 57 66.7
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 4.8e-11 70.9 47 68.1
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.0e-09 65.5 73 50.7
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 3.5e-09 64.7 71 53.5
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 5.9e-09 63.9 73 50.7
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 1.0e-08 63.2 69 46.4
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 1.7e-08 62.4 72 45.8
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 6.5e-08 60.5 71 46.5
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 2.5e-07 58.5 69 46.4
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.7e-06 54.3 73 43.8
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 6.1e-06 53.9 29 75.9


User provided reference genes

Program Settings