Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 1.7e-274 948.7 483 100.0
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 4.4e-174 615.1 479 72.7
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 4.9e-165 585.1 499 66.7
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 2.3e-146 523.1 510 60.0
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 4.8e-144 515.4 506 59.5
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 1.3e-141 507.3 556 55.0
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 1.2e-139 500.7 563 53.6
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 1.2e-126 457.6 541 51.9
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 4.5e-126 455.7 510 54.9
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 1.5e-121 440.7 248 89.1
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 4.8e-112 409.1 524 49.6
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 1.5e-105 387.5 510 48.6
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 6.2e-75 285.8 592 36.8
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 1.7e-72 277.7 352 48.3
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 1.1e-71 275.0 356 45.2
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 1.4e-71 274.6 424 44.3
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 3.2e-71 273.5 421 43.5
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 3.2e-71 273.5 453 41.1
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 7.1e-71 272.3 429 43.1
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 2.7e-70 270.4 351 48.7
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 4.6e-70 269.6 582 37.1
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 7.8e-70 268.9 562 37.2
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.0e-69 268.5 354 47.2
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 2.3e-69 267.3 356 47.2
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 3.9e-69 266.5 354 47.5
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 1.9e-68 264.2 357 44.5
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.5e-68 263.8 347 49.6
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 3.3e-68 263.5 349 49.0
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 3.3e-68 263.5 412 41.7
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 5.6e-68 262.7 423 41.6
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 1.2e-67 261.5 347 49.3
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.6e-67 261.2 344 48.8
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.6e-67 261.2 344 48.8
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 2.1e-67 260.8 425 41.4
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 3.6e-67 260.0 343 48.1
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 8.1e-67 258.8 614 36.0
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 2.3e-66 257.3 425 41.4
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.3e-66 257.3 347 48.7
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 4.0e-66 256.5 437 41.4
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 5.2e-66 256.1 420 41.9
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 8.9e-66 255.4 348 47.7
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 8.9e-66 255.4 522 37.7
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 1.5e-65 254.6 432 38.9
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 1.5e-65 254.6 544 36.0
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 3.4e-65 253.4 362 46.1
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 3.4e-65 253.4 428 40.0
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 4.4e-65 253.1 515 36.5
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 4.4e-65 253.1 432 43.1
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 4.4e-65 253.1 385 43.4
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 7.5e-65 252.3 457 40.0
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 7.5e-65 252.3 457 40.0
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 7.5e-65 252.3 635 33.9
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 1.7e-64 251.1 381 43.6
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 2.2e-64 250.8 577 35.0
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 2.9e-64 250.4 357 45.4
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 2.9e-64 250.4 423 40.9
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 4.9e-64 249.6 423 42.1
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 6.4e-64 249.2 425 40.7
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.4e-63 248.1 594 34.7
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 2.4e-63 247.3 375 44.5
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 4.1e-63 246.5 640 32.8
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.2e-62 245.0 633 33.0
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 1.3e-61 241.5 630 32.5
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 3.0e-61 240.4 358 42.5
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 1.5e-60 238.0 409 40.1
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 1.9e-60 237.7 417 40.5
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 3.3e-60 236.9 354 43.2
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 2.8e-59 233.8 593 35.1
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 6.2e-59 232.6 389 40.1
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 8.1e-59 232.3 356 43.3
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 2.4e-58 230.7 353 42.2
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 3.1e-58 230.3 377 41.9
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 4.0e-58 229.9 221 56.6
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 1.9e-55 221.1 597 33.5
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 7.8e-54 215.7 621 33.0
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 7.8e-54 215.7 241 50.6
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 1.0e-53 215.3 607 33.4
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 1.3e-53 214.9 351 41.0
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 2.3e-53 214.2 358 40.5
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 3.0e-53 213.8 543 32.6
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 8.7e-53 212.2 387 39.5
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 2.5e-52 210.7 466 35.6
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.5e-52 210.7 623 32.6
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 5.6e-52 209.5 666 31.2
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 5.6e-52 209.5 672 29.8
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 5.6e-52 209.5 549 34.2
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 2.4e-50 204.1 585 29.9
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 6.9e-50 202.6 420 36.0
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 6.9e-50 202.6 476 33.8
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 9.0e-50 202.2 359 40.1
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 1.2e-49 201.8 614 30.9
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 1.2e-49 201.8 567 32.3
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 4.4e-49 199.9 618 31.7
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 2.5e-44 184.1 186 54.3
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 2.1e-43 181.0 360 36.7
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 2.1e-43 181.0 360 36.7
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 2.1e-43 181.0 360 36.7
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 1.1e-42 178.7 621 29.1
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 1.1e-42 178.7 621 29.1
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 2.4e-42 177.6 357 39.8
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 6.9e-42 176.0 175 56.6
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 9.9e-41 172.2 616 31.2
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 5.1e-37 159.8 124 66.1
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 5.6e-36 156.4 371 34.8
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 1.3e-35 155.2 145 56.6
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 2.2e-32 144.4 116 62.9
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 4.2e-31 140.2 635 26.5
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 1.6e-30 138.3 346 36.4
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 2.1e-22 111.3 94 58.5
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 2.5e-20 104.4 486 27.0
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 2.2e-19 101.3 200 37.0
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 3.7e-19 100.5 237 31.6
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 8.8e-13 79.3 219 32.9
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 1.7e-11 75.1 212 32.5
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 6.3e-11 73.2 214 35.5
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 2.4e-10 71.2 85 41.2
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 5.0e-08 63.5 142 32.4
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.9e-07 61.6 198 33.3
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 7.9e-06 56.2 153 32.0


User provided reference genes

Program Settings