Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 1.3e-175 619.8 350 100.0
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 4.7e-149 531.6 382 83.0
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 1.1e-145 520.4 383 77.3
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 7.0e-145 517.7 383 78.9
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 1.8e-137 493.0 380 76.3
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 7.7e-136 487.6 366 75.7
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 1.9e-134 483.0 333 79.0
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 5.2e-132 474.9 377 74.0
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 2.2e-130 469.5 330 78.5
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 8.3e-130 467.6 335 75.8
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 2.4e-129 466.1 330 76.1
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 5.4e-129 464.9 328 75.3
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 5.4e-129 464.9 330 76.1
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 7.0e-129 464.5 355 76.1
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 1.2e-128 463.8 328 75.0
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 1.6e-128 463.4 320 77.5
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 1.6e-128 463.4 330 75.5
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 2.0e-128 463.0 330 74.5
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 2.0e-128 463.0 330 78.2
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 7.8e-128 461.1 357 74.2
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 1.7e-127 459.9 329 78.7
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 8.6e-127 457.6 326 77.9
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 2.5e-126 456.1 328 74.1
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 2.1e-125 453.0 339 76.1
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 2.8e-125 452.6 325 76.3
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 8.0e-125 451.1 341 71.0
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 1.4e-124 450.3 315 76.5
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 3.0e-124 449.1 329 72.9
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 4.0e-124 448.7 402 66.4
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 5.2e-124 448.4 274 84.3
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 6.8e-124 448.0 355 70.1
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 1.5e-123 446.8 360 72.5
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 2.0e-123 446.4 326 76.7
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 9.8e-123 444.1 354 71.5
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 9.8e-123 444.1 354 71.8
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 9.8e-123 444.1 330 73.0
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 2.9e-122 442.6 334 74.3
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 6.4e-122 441.4 339 72.6
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 8.3e-122 441.0 395 65.6
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 8.3e-122 441.0 395 65.6
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 3.2e-121 439.1 275 80.4
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 4.1e-121 438.7 320 74.1
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 5.4e-121 438.3 342 72.8
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 7.0e-121 438.0 298 77.2
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 7.0e-121 438.0 314 73.2
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 1.2e-120 437.2 338 73.4
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 7.8e-120 434.5 363 70.0
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 2.3e-119 433.0 365 69.6
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 1.1e-118 430.6 350 74.0
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 1.5e-118 430.3 401 63.8
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 9.5e-118 427.6 335 67.8
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 1.2e-117 427.2 258 86.0
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 2.1e-117 426.4 259 83.8
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 2.8e-117 426.0 372 66.9
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 2.8e-117 426.0 334 71.0
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 6.2e-117 424.9 342 69.9
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 1.8e-116 423.3 340 69.4
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 1.8e-116 423.3 327 71.6
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 3.1e-116 422.5 264 81.4
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 3.1e-116 422.5 368 66.3
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 3.1e-116 422.5 327 71.9
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 1.5e-115 420.2 347 67.7
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 2.6e-115 419.5 332 69.3
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 5.8e-115 418.3 341 67.7
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 7.5e-115 417.9 337 68.8
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 7.5e-115 417.9 339 69.9
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 7.5e-115 417.9 340 67.1
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 1.3e-114 417.2 357 65.8
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 1.3e-114 417.2 259 81.5
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 1.7e-114 416.8 340 69.7
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 2.9e-114 416.0 344 68.6
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 2.9e-114 416.0 264 80.7
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 4.9e-114 415.2 340 69.4
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 1.1e-113 414.1 340 68.8
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 1.1e-113 414.1 340 69.1
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.1e-113 414.1 290 75.5
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 2.4e-113 412.9 342 71.1
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 5.4e-113 411.8 266 79.3
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 1.2e-112 410.6 327 69.1
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-112 410.6 375 63.5
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-112 410.6 375 63.5
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 1.0e-111 407.5 347 64.6
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 1.0e-111 407.5 363 63.9
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 3.0e-111 406.0 371 63.3
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 3.9e-111 405.6 418 59.3
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 6.6e-111 404.8 333 69.1
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 1.9e-110 403.3 371 65.0
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 9.5e-110 401.0 373 64.9
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 2.8e-109 399.4 273 74.4
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 8.1e-109 397.9 323 69.7
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 3.1e-108 396.0 408 61.0
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.1e-105 387.5 385 60.5
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 5.1e-103 378.6 314 68.8
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.5e-102 377.1 342 66.7
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 9.5e-102 374.4 323 66.3
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 2.1e-101 373.2 286 69.2
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 6.8e-100 368.2 240 77.5
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.5e-99 367.1 342 65.8
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 2.1e-96 356.7 263 66.5
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 1.0e-95 354.4 264 67.4
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 4.7e-93 345.5 273 65.9
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 5.4e-89 332.0 265 64.2
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 7.8e-88 328.2 222 77.5
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 8.7e-87 324.7 266 62.8
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 8.7e-87 324.7 251 65.7
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 9.6e-86 321.2 357 55.5
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 2.9e-82 309.7 387 55.6
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 3.8e-82 309.3 246 72.4
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.4e-81 307.4 349 51.9
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.4e-81 307.4 349 51.9
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 5.6e-78 295.4 261 57.5
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 9.6e-78 294.7 349 49.6
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 4.8e-77 292.4 361 47.4
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 8.4e-74 281.6 307 60.6
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 2.7e-72 276.6 341 52.8
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 9.6e-70 268.1 226 68.6
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 6.5e-66 255.4 169 80.5
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.1e-64 250.4 262 56.9
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.0e-51 207.2 235 49.8
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 1.0e-47 194.9 226 60.2
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.5e-43 179.9 211 52.6
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 7.5e-30 135.6 106 72.6
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 2.4e-28 130.6 92 68.5
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.0e-23 115.2 196 44.4
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 2.7e-19 100.5 240 32.1
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 1.9e-17 94.4 62 67.7
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 4.2e-17 93.2 98 60.2
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 9.5e-17 92.0 267 27.7
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 3.4e-14 83.6 112 42.0


User provided reference genes

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