Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 1.3e-102 376.3 183 100.0
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 3.8e-94 348.2 183 92.3
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.9e-93 345.9 182 91.8
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 7.2e-93 344.0 182 91.2
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 6.3e-89 330.9 182 86.3
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 2.5e-85 318.9 183 85.2
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 4.2e-85 318.2 183 85.2
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 2.1e-84 315.8 183 82.5
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 3.0e-83 312.0 178 83.7
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 6.8e-83 310.8 183 81.4
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 6.8e-83 310.8 183 81.4
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 6.8e-83 310.8 187 80.2
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 1.5e-82 309.7 182 82.4
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 4.4e-82 308.1 183 81.4
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 9.8e-82 307.0 183 82.0
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 9.8e-82 307.0 182 81.9
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 1.7e-81 306.2 180 81.1
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 1.7e-81 306.2 182 80.8
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 4.9e-81 304.7 181 81.2
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.1e-80 303.5 175 82.9
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 2.4e-80 302.4 180 80.6
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 2.4e-80 302.4 184 80.4
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 2.4e-80 302.4 175 83.4
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 7.0e-80 300.8 182 79.7
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 3.5e-79 298.5 186 78.0
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 4.5e-79 298.1 174 81.6
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 4.5e-79 298.1 179 78.8
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 7.8e-79 297.4 175 81.7
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 7.8e-79 297.4 175 81.7
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 7.8e-79 297.4 174 81.0
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.3e-78 296.6 183 79.8
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 1.3e-78 296.6 179 78.8
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.3e-78 296.6 174 80.5
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 2.9e-78 295.4 182 79.1
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 6.6e-78 294.3 174 80.5
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 8.6e-78 293.9 179 78.8
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 8.6e-78 293.9 184 78.3
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 8.6e-78 293.9 184 78.3
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 2.5e-77 292.4 179 77.1
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 9.5e-77 290.4 168 79.2
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 9.5e-77 290.4 170 81.8
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 1.2e-76 290.0 183 77.6
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 4.7e-76 288.1 168 82.7
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 4.7e-76 288.1 183 77.0
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 6.1e-76 287.7 182 78.6
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 6.1e-76 287.7 186 76.9
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 6.1e-76 287.7 170 81.2
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 2.3e-75 285.8 176 78.4
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 2.3e-75 285.8 178 80.3
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 3.0e-75 285.4 177 77.4
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 3.0e-75 285.4 175 78.3
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 4.0e-75 285.0 181 75.7
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 4.0e-75 285.0 168 81.5
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 4.0e-75 285.0 202 71.3
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 5.2e-75 284.6 170 80.6
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 1.5e-74 283.1 173 77.5
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 4.4e-74 281.6 168 81.0
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 9.8e-74 280.4 164 81.7
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 1.3e-73 280.0 168 80.4
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 1.3e-73 280.0 175 78.3
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 4.9e-73 278.1 175 76.0
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 4.9e-73 278.1 176 76.1
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.1e-72 276.9 181 75.1
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 1.4e-72 276.6 165 81.2
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 2.4e-72 275.8 162 80.9
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 7.0e-72 274.2 165 78.8
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 1.2e-71 273.5 164 79.3
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 1.6e-71 273.1 177 74.0
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 3.5e-71 271.9 175 75.4
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 4.6e-71 271.6 177 74.6
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 4.6e-71 271.6 175 74.9
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 4.6e-71 271.6 175 74.9
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 4.6e-71 271.6 175 74.9
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 7.8e-71 270.8 170 75.9
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 1.3e-70 270.0 179 72.6
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 1.7e-70 269.6 176 74.4
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 2.3e-70 269.2 180 75.0
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 3.0e-70 268.9 168 72.0
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 6.6e-70 267.7 176 75.0
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 8.6e-70 267.3 164 77.4
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 8.6e-70 267.3 164 77.4
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.1e-69 266.9 164 77.4
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 1.1e-69 266.9 176 74.4
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 1.5e-69 266.5 165 77.6
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 1.9e-69 266.2 167 74.9
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 4.3e-69 265.0 174 74.1
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 2.8e-68 262.3 176 73.3
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 3.4e-66 255.4 147 83.0
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 1.2e-63 246.9 211 60.7
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 4.6e-63 245.0 193 66.3
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 3.9e-62 241.9 176 69.3
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 3.3e-61 238.8 168 66.7
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 1.1e-59 233.8 152 75.7
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 2.0e-58 229.6 164 64.6
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 5.8e-58 228.0 175 67.4
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 7.5e-58 227.6 163 68.1
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 4.9e-57 224.9 173 63.6
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.7e-54 216.5 176 62.5
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 2.1e-52 209.5 128 80.5
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 2.4e-51 206.1 131 74.8
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 5.4e-48 194.9 157 61.8
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 5.4e-48 194.9 126 73.8
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 6.6e-46 188.0 117 76.1
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 1.1e-45 187.2 118 73.7
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.2e-44 183.7 114 76.3
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 6.9e-43 177.9 114 73.7
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 1.2e-42 177.2 114 73.7
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 2.9e-41 172.6 104 81.7
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 3.9e-38 162.2 109 70.6
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 1.1e-37 160.6 102 78.4
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 5.6e-37 158.3 177 46.3
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 1.3e-36 157.1 181 47.5
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 4.8e-36 155.2 94 80.9
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.5e-21 107.1 162 38.3
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 5.5e-16 88.6 51 80.4
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 9.3e-16 87.8 185 30.3
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 3.0e-14 82.8 59 67.8
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 3.0e-14 82.8 185 28.1
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 5.7e-13 78.6 193 28.5
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 4.5e-10 68.9 67 52.2
AagrBONN_evm.TU.Sc2ySwM_340.195 Anthoceros agrestis HOM05D006649 ORTHO05D023509 1.4e-06 57.4 114 31.6
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 8.8e-06 54.7 60 51.7


User provided reference genes

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