Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 4.8e-233 810.8 419 100.0
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 1.1e-200 703.4 424 88.9
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 2.0e-194 682.6 419 85.0
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 1.8e-192 676.0 419 85.0
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 1.4e-160 570.1 429 73.4
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 1.6e-159 566.6 424 74.1
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.0e-158 563.9 424 72.9
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 5.0e-158 561.6 437 73.2
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 1.2e-151 540.4 421 71.3
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 6.0e-151 538.1 384 74.5
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 1.8e-147 526.6 347 78.7
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 2.6e-146 522.7 347 78.1
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 1.8e-139 500.0 256 98.8
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 1.2e-135 487.3 379 67.8
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 5.1e-134 481.9 425 61.9
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 1.6e-132 476.9 410 64.4
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 4.0e-131 472.2 380 66.1
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 2.0e-130 469.9 377 67.6
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 1.3e-129 467.2 345 71.0
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 2.2e-129 466.5 420 62.9
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 3.8e-129 465.7 417 63.3
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 4.9e-129 465.3 387 65.9
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 1.4e-128 463.8 341 72.7
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.4e-128 463.8 348 70.4
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 3.2e-128 462.6 348 70.1
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 5.4e-128 461.8 386 65.3
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 1.2e-127 460.7 435 60.5
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 1.6e-127 460.3 389 64.5
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.6e-127 460.3 439 60.1
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 7.9e-127 458.0 375 65.6
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 3.9e-126 455.7 396 63.6
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 1.1e-125 454.1 375 66.7
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 1.9e-125 453.4 380 62.6
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 1.9e-125 453.4 389 62.7
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 7.4e-125 451.4 378 64.8
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 7.4e-125 451.4 375 63.2
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 9.6e-125 451.1 376 63.0
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 1.3e-124 450.7 386 63.2
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 1.6e-124 450.3 384 64.1
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 1.6e-124 450.3 371 63.6
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 2.1e-124 449.9 376 63.8
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 3.7e-124 449.1 385 65.5
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 3.7e-124 449.1 347 66.9
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 4.8e-124 448.7 380 62.4
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 8.1e-124 448.0 380 62.4
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 3.1e-123 446.0 369 63.7
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 4.0e-123 445.7 339 67.3
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 6.9e-123 444.9 343 67.9
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 9.0e-123 444.5 381 61.9
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.2e-122 444.1 385 62.9
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 1.2e-122 444.1 394 61.7
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 1.2e-122 444.1 348 67.2
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 1.5e-122 443.7 378 62.7
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 1.5e-122 443.7 349 67.9
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 2.0e-122 443.4 370 64.6
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 3.4e-122 442.6 410 60.7
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 3.4e-122 442.6 445 57.1
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 4.5e-122 442.2 344 68.6
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 1.7e-121 440.3 341 68.3
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 1.7e-121 440.3 387 61.5
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 1.7e-121 440.3 427 58.3
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 6.4e-121 438.3 445 57.1
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 1.4e-120 437.2 392 62.2
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 1.9e-120 436.8 386 62.4
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 7.1e-120 434.9 376 62.8
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 7.1e-120 434.9 445 56.2
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 9.3e-120 434.5 396 61.1
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 9.3e-120 434.5 425 58.1
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 9.3e-120 434.5 365 62.5
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 2.1e-119 433.3 426 56.6
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 4.6e-119 432.2 340 67.6
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 3.9e-118 429.1 416 58.2
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 5.1e-118 428.7 374 63.4
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 2.5e-117 426.4 337 66.2
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 3.3e-117 426.0 327 67.6
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 3.3e-117 426.0 374 63.6
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 5.6e-117 425.2 341 63.6
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 2.8e-116 422.9 310 72.3
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 2.8e-116 422.9 463 53.6
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 6.2e-116 421.8 434 56.5
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 2.4e-115 419.9 380 60.0
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 6.9e-115 418.3 333 66.7
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 2.0e-114 416.8 343 65.6
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 1.0e-113 414.5 388 59.0
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 1.0e-113 414.5 414 56.0
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 4.9e-113 412.1 370 58.4
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 1.9e-112 410.2 395 58.0
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 7.1e-112 408.3 345 64.6
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.2e-111 407.5 389 59.6
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 1.9e-109 400.2 368 60.6
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 2.5e-109 399.8 336 61.9
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 3.3e-109 399.4 404 57.4
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 9.1e-99 364.8 292 65.8
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 7.4e-93 345.1 401 51.4
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 1.7e-92 344.0 239 73.6
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 5.9e-90 335.5 440 49.5
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 9.7e-85 318.2 404 47.5
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 9.7e-85 318.2 357 51.3
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 6.3e-84 315.5 337 55.8
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 5.5e-80 302.4 211 74.4
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 1.1e-72 278.1 209 71.3
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 5.2e-70 269.2 203 68.5
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 2.2e-68 263.8 340 46.2
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 1.1e-64 251.5 343 44.3
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 1.2e-63 248.1 376 40.4
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 2.4e-59 233.8 339 42.2
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.7e-52 211.1 224 52.7
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 2.1e-39 167.5 210 47.6
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.4e-30 138.3 242 36.8
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 2.4e-30 137.5 77 87.0
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 1.7e-28 131.3 195 44.6
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 8.7e-25 119.0 117 59.0
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 9.9e-21 105.5 116 50.9
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.7e-17 94.7 145 46.2
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 1.1e-16 92.0 101 50.5
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 2.8e-15 87.4 95 52.6
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 3.6e-15 87.0 339 27.4
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 5.3e-14 83.2 351 27.6
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 9.6e-08 62.4 141 34.8
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 9.6e-08 62.4 36 75.0


User provided reference genes

Program Settings