Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 1.9e-90 335.9 174 100.0
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 1.3e-86 323.2 174 96.6
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 1.8e-80 302.8 174 89.1
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.1e-77 293.5 174 86.2
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 1.8e-77 292.7 174 85.6
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 2.9e-75 285.4 152 95.4
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 6.5e-75 284.3 183 83.1
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 1.1e-74 283.5 174 86.2
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 5.5e-74 281.2 174 86.2
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 1.1e-71 273.5 174 82.8
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 5.7e-71 271.2 174 80.5
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 2.2e-70 269.2 175 81.1
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 1.4e-69 266.5 174 82.8
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 1.8e-69 266.2 174 79.9
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 5.3e-69 264.6 174 79.9
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 6.9e-69 264.2 174 81.6
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 6.9e-69 264.2 152 92.1
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 9.0e-69 263.8 174 78.7
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.2e-68 263.5 174 82.2
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.2e-68 263.5 174 82.2
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.2e-68 263.5 174 82.8
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 2.6e-68 262.3 176 80.7
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 3.4e-68 261.9 174 81.6
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 5.9e-68 261.2 173 80.9
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 5.0e-67 258.1 175 78.9
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 5.0e-67 258.1 175 79.4
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 5.0e-67 258.1 175 79.4
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 5.0e-67 258.1 175 79.4
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 5.0e-67 258.1 174 79.3
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 8.5e-67 257.3 175 80.0
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.1e-66 256.9 174 79.3
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 4.2e-66 255.0 175 79.4
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 7.2e-66 254.2 174 77.6
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 2.1e-65 252.7 175 78.3
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 2.7e-65 252.3 175 78.3
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 3.6e-65 251.9 175 78.3
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 6.1e-65 251.1 166 79.5
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 1.0e-64 250.4 174 78.2
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 1.3e-64 250.0 170 80.0
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 2.3e-64 249.2 175 77.7
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 3.0e-64 248.8 175 77.1
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 3.9e-64 248.4 175 76.0
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 8.7e-64 247.3 175 78.3
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.5e-63 246.5 176 76.7
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 1.5e-63 246.5 175 76.6
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 1.5e-63 246.5 179 76.0
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 2.5e-63 245.7 150 85.3
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 2.5e-63 245.7 175 77.7
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 4.3e-63 245.0 175 76.6
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 9.7e-63 243.8 175 76.6
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 9.7e-63 243.8 178 76.4
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 1.7e-62 243.0 175 77.1
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 2.2e-62 242.7 174 74.7
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 2.8e-62 242.3 175 76.6
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 2.8e-62 242.3 176 78.4
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 3.7e-62 241.9 174 76.4
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 1.8e-61 239.6 175 75.4
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 9.1e-61 237.3 175 73.1
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 1.5e-60 236.5 175 74.3
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 2.6e-60 235.7 175 73.7
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 2.6e-60 235.7 175 73.7
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 2.6e-60 235.7 175 73.7
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 2.6e-60 235.7 175 73.7
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 3.4e-60 235.3 175 73.1
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 4.5e-60 235.0 175 74.3
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 5.9e-60 234.6 175 73.1
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 7.7e-60 234.2 175 73.1
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 7.7e-60 234.2 175 73.1
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 7.7e-60 234.2 175 73.1
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 1.0e-59 233.8 175 72.6
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 1.0e-59 233.8 174 73.0
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 1.3e-59 233.4 175 72.6
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 1.3e-59 233.4 174 73.0
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 2.2e-59 232.6 175 72.0
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 2.2e-59 232.6 177 73.4
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 3.8e-59 231.9 168 74.4
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 3.8e-59 231.9 174 74.1
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 8.5e-59 230.7 176 73.3
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 1.1e-58 230.3 175 73.7
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 1.4e-58 229.9 175 72.0
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 5.5e-58 228.0 176 72.7
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 5.5e-58 228.0 176 72.2
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 5.5e-58 228.0 174 71.8
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 2.7e-57 225.7 173 68.8
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 1.5e-55 219.9 169 73.4
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 5.7e-55 218.0 173 66.5
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 3.7e-54 215.3 140 82.1
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 4.8e-54 214.9 123 90.2
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 1.8e-53 213.0 168 70.2
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 1.8e-53 213.0 143 81.1
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 2.4e-53 212.6 175 68.0
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 3.1e-53 212.2 137 82.5
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 7.7e-52 207.6 173 65.3
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 2.0e-47 193.0 179 60.3
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 2.0e-47 193.0 141 69.5
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 7.7e-44 181.0 155 70.3
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 5.0e-43 178.3 153 67.3
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 1.5e-42 176.8 174 59.2
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 1.5e-42 176.8 179 58.1
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 4.0e-40 168.7 182 53.8
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 4.4e-39 165.2 174 55.7
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 4.8e-38 161.8 138 68.8
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 1.8e-37 159.8 165 60.0
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 4.1e-37 158.7 138 67.4
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 5.3e-37 158.3 155 63.2
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 1.8e-32 143.3 116 76.7
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 5.4e-29 131.7 107 72.9
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 9.1e-29 131.0 111 70.3
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 3.8e-27 125.6 98 73.5
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 1.5e-26 123.6 110 70.0
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 3.4e-23 112.5 165 43.0
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 2.4e-21 106.3 107 65.4
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 9.2e-21 104.4 164 42.1
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 1.2e-15 87.4 70 74.3
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 8.3e-14 81.3 90 64.4
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 1.2e-12 77.4 62 72.6
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 1.6e-12 77.0 90 62.2
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 2.0e-12 76.6 80 60.0
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 2.7e-12 76.3 62 72.6
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 4.6e-12 75.5 73 56.2
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 1.0e-11 74.3 111 47.7
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 3.0e-11 72.8 63 71.4
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 3.9e-11 72.4 96 51.0
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 8.6e-11 71.2 62 66.1
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 1.9e-10 70.1 109 54.1
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 2.5e-10 69.7 62 71.0
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 3.3e-10 69.3 62 66.1
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 8.0e-09 64.7 89 59.6
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 3.1e-08 62.8 46 73.9
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 4.0e-08 62.4 97 49.5
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 1.2e-07 60.8 46 71.7
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 1.5e-07 60.5 68 66.2
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 4.4e-07 58.9 46 69.6
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 4.9e-06 55.5 50 72.0
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 6.4e-06 55.1 138 36.2


User provided reference genes

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