Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 1.5e-152 542.7 267 100.0
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 1.3e-135 486.5 262 92.0
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 8.3e-130 467.2 263 90.1
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 2.5e-126 455.7 261 87.0
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 1.5e-123 446.4 252 86.1
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 2.0e-123 446.0 253 87.0
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 1.1e-121 440.3 253 85.0
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 3.1e-121 438.7 256 84.4
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 4.7e-117 424.9 248 83.5
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 6.8e-116 421.0 277 77.3
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 2.2e-114 416.0 253 81.0
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 1.0e-111 407.1 251 79.7
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 2.9e-111 405.6 249 79.9
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 3.9e-111 405.2 253 77.9
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.9e-110 402.9 251 78.5
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 9.5e-110 400.6 255 76.1
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 8.0e-109 397.5 245 78.4
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 1.8e-108 396.4 262 76.7
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 3.1e-108 395.6 259 77.6
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 4.0e-108 395.2 250 78.8
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 1.2e-107 393.7 254 76.8
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.5e-107 393.3 240 77.9
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 2.6e-107 392.5 252 77.4
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 2.6e-107 392.5 243 79.0
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 4.4e-107 391.7 254 75.6
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 9.8e-107 390.6 251 75.7
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 2.2e-106 389.4 251 76.1
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.7e-106 388.7 256 75.4
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 4.9e-106 388.3 251 74.5
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 6.4e-106 387.9 256 75.0
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 6.4e-106 387.9 256 75.0
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 6.4e-106 387.9 251 75.3
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 1.1e-105 387.1 251 77.7
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 1.4e-105 386.7 251 74.1
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 1.4e-105 386.7 251 76.1
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 1.9e-105 386.3 244 77.0
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 2.4e-105 386.0 220 85.5
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 3.2e-105 385.6 255 74.9
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 3.2e-105 385.6 251 74.9
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 4.1e-105 385.2 249 75.1
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 5.4e-105 384.8 259 74.9
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 7.0e-105 384.4 235 78.7
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 7.0e-105 384.4 258 75.6
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 1.2e-104 383.6 252 75.4
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 2.0e-104 382.9 251 75.3
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 2.7e-104 382.5 233 79.8
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 2.7e-104 382.5 249 74.7
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 4.6e-104 381.7 258 76.0
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.3e-103 380.2 253 76.7
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 1.3e-103 380.2 260 73.8
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 1.7e-103 379.8 270 71.5
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 3.0e-103 379.0 231 77.1
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 1.1e-102 377.1 251 74.5
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.5e-102 376.7 247 76.1
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 3.3e-102 375.6 247 74.5
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 4.3e-102 375.2 252 73.0
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 5.6e-102 374.8 271 70.5
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 7.3e-102 374.4 251 75.7
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 2.1e-101 372.9 240 74.2
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 8.1e-101 370.9 250 72.4
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.1e-100 370.5 254 71.7
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 1.4e-100 370.2 253 71.9
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 1.4e-100 370.2 251 71.7
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 1.4e-100 370.2 234 76.9
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 1.8e-100 369.8 253 71.9
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 3.1e-100 369.0 247 72.5
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 4.0e-100 368.6 254 73.6
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 6.8e-100 367.9 253 71.1
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 6.8e-100 367.9 244 74.6
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 8.9e-100 367.5 230 77.8
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 1.2e-99 367.1 253 71.5
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 1.5e-99 366.7 253 71.5
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 1.5e-99 366.7 250 73.6
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 2.0e-99 366.3 229 76.4
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 5.8e-99 364.8 252 71.4
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 5.8e-99 364.8 250 70.4
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 5.8e-99 364.8 251 69.7
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 1.3e-98 363.6 253 71.9
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 1.3e-98 363.6 252 71.0
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 9.2e-97 357.5 255 69.4
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 9.2e-97 357.5 255 69.4
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 3.5e-96 355.5 210 81.9
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 2.3e-95 352.8 265 67.2
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 4.3e-94 348.6 319 58.6
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 9.5e-94 347.4 209 80.9
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 9.5e-94 347.4 326 57.4
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 2.8e-93 345.9 253 67.6
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.1e-92 344.0 267 65.9
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 2.3e-92 342.8 240 72.5
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 3.1e-92 342.4 209 77.5
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 4.0e-92 342.0 211 76.8
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 8.9e-92 340.9 237 70.9
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 8.9e-92 340.9 209 78.9
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 8.9e-92 340.9 209 79.9
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 3.4e-91 339.0 230 68.3
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 2.9e-90 335.9 236 70.3
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 6.4e-90 334.7 209 77.5
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 1.0e-87 327.4 213 76.5
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.3e-87 327.0 198 78.3
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 1.7e-87 326.6 336 56.5
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.4e-84 317.0 200 79.5
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 9.0e-76 287.7 198 69.7
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 1.0e-71 274.2 225 61.8
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 3.0e-71 272.7 175 77.1
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 2.1e-69 266.5 166 81.9
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 6.2e-69 265.0 241 53.9
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 5.1e-63 245.4 250 49.2
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 3.1e-60 236.1 225 54.2
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 5.8e-59 231.9 151 72.8
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 3.9e-55 219.2 239 48.1
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 4.8e-53 212.2 134 79.1
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.6e-51 206.5 135 72.6
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 5.5e-49 198.7 144 69.4
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 1.6e-48 197.2 143 70.6
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 2.7e-48 196.4 144 68.8
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 6.9e-44 181.8 173 56.1
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 4.5e-43 179.1 115 79.1
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 1.9e-41 173.7 96 88.5
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.5e-41 173.3 117 68.4
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 4.3e-38 162.5 121 66.9
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 7.2e-33 145.2 75 88.0
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 1.2e-32 144.4 95 72.6
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.5e-25 120.9 82 64.6
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.4e-23 114.4 121 54.5
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 4.1e-20 102.8 47 95.7
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.8e-12 77.4 171 30.4
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 5.4e-12 75.9 112 44.6
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 4.5e-11 72.8 112 43.8
CSS0050126 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D033925 2.0e-06 57.4 40 65.0


User provided reference genes

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