Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G098551 Glycine max HOM05D004110 ORTHO05D004810 4.6e-194 681.0 336 100.0
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 1.4e-179 632.9 335 92.2
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 1.0e-177 626.7 335 90.7
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 8.4e-164 580.5 335 82.7
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 2.5e-160 568.9 335 81.2
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 5.6e-160 567.8 334 82.0
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 8.2e-159 563.9 335 80.9
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 8.2e-159 563.9 335 80.9
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 5.3e-158 561.2 335 80.6
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 1.8e-153 546.2 335 78.5
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 4.8e-151 538.1 335 77.9
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 1.2e-149 533.5 335 77.3
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 2.7e-138 495.7 336 72.0
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 2.0e-133 479.6 336 70.5
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 2.6e-133 479.2 336 68.2
Haze_02194 Corylus avellana HOM05D004110 ORTHO05D004810 6.5e-132 474.6 366 65.8
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 3.2e-131 472.2 335 67.2
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 4.2e-131 471.9 336 68.2
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 7.2e-131 471.1 336 66.7
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 6.1e-130 468.0 336 67.6
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 2.3e-129 466.1 335 68.1
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 5.2e-129 464.9 336 67.0
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 8.8e-129 464.2 336 66.1
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 2.6e-128 462.6 335 67.8
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 5.7e-128 461.5 336 67.3
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 1.7e-127 459.9 335 65.7
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 4.8e-127 458.4 336 66.4
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 2.4e-126 456.1 325 68.9
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 3.1e-126 455.7 336 66.7
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 4.1e-126 455.3 336 67.6
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 7.0e-126 454.5 336 67.3
vmacro17378 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 7.0e-126 454.5 335 65.1
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 9.1e-126 454.1 336 67.0
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 9.1e-126 454.1 336 67.3
Cpa.g.sc37.188 Carica papaya HOM05D004110 ORTHO05D004810 1.2e-125 453.8 337 66.2
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 1.6e-125 453.4 336 64.9
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 2.6e-125 452.6 336 64.9
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.0e-124 450.7 336 66.7
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 5.0e-124 448.4 336 65.2
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 1.1e-123 447.2 360 60.6
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 1.9e-123 446.4 337 62.9
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 7.2e-123 444.5 353 63.2
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 1.4e-121 440.3 335 63.6
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 3.0e-121 439.1 336 64.6
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 1.2e-120 437.2 336 63.7
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 2.0e-120 436.4 335 63.3
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 5.7e-120 434.9 334 62.3
Nitab4.5_0006590g0020 Nicotiana tabacum HOM05D004110 ORTHO05D004810 1.7e-119 433.3 333 61.9
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 2.2e-119 433.0 335 61.8
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 2.8e-119 432.6 334 61.4
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 4.8e-119 431.8 337 61.4
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 8.3e-119 431.0 337 61.4
MD10G1119400 Malus domestica HOM05D004110 ORTHO05D004810 1.8e-118 429.9 288 70.1
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 9.1e-118 427.6 297 67.7
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 1.6e-117 426.8 335 60.9
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 7.7e-117 424.5 336 62.2
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 1.3e-116 423.7 340 60.6
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 5.0e-116 421.8 322 63.4
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 6.5e-116 421.4 334 59.3
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 6.5e-116 421.4 335 61.2
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 1.1e-115 420.6 339 59.6
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 1.5e-115 420.2 324 61.4
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 2.5e-115 419.5 324 61.1
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 9.4e-115 417.5 335 59.7
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 2.1e-114 416.4 335 60.3
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 8.0e-114 414.5 334 59.9
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 8.0e-114 414.5 288 67.4
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 1.0e-113 414.1 334 59.6
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 3.0e-113 412.5 335 58.8
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 4.0e-113 412.1 336 58.6
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 8.8e-113 411.0 334 59.0
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 8.8e-113 411.0 334 59.0
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 2.8e-111 406.0 335 58.2
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 2.8e-111 406.0 335 58.5
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 6.3e-111 404.8 371 55.8
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 5.5e-107 391.7 335 58.2
CAN.G603.2 Capsicum annuum HOM05D004110 ORTHO05D004810 9.5e-107 391.0 320 60.0
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 4.9e-103 378.6 335 54.6
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 4.1e-102 375.6 338 55.3
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 1.0e-100 370.9 370 50.3
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 5.2e-97 358.6 355 50.1
SHI05691 Sapria himalayana HOM05D004110 ORTHO05D004810 5.8e-96 355.1 385 48.3
HPP92_005008 Vanilla planifolia HOM05D004110 ORTHO05D004810 5.8e-96 355.1 327 51.1
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 8.0e-90 334.7 333 46.5
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 4.0e-89 332.4 325 51.1
CDE05G0764 Ceratophyllum demersum HOM05D004110 ORTHO05D004810 9.8e-88 327.8 295 53.9
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 4.1e-86 322.4 239 66.5
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 1.4e-78 297.4 237 63.3
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 1.1e-73 281.2 318 48.4
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 8.9e-73 278.1 333 39.3
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 1.4e-70 270.8 328 38.7
CSS0003289 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 4.3e-67 259.2 188 64.9
ClCG02G011580 Citrullus lanatus HOM05D004110 ORTHO05D004810 5.3e-65 252.3 227 54.2
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 2.0e-64 250.4 369 35.0
Duzib248G1214 Durio zibethinus HOM05D004110 ORTHO05D004810 5.1e-52 209.1 179 59.8
CSS0015162 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 3.9e-36 156.4 100 73.0
ClCG02G011590 Citrullus lanatus HOM05D004110 ORTHO05D004810 2.2e-26 124.0 91 64.8
Psat1g093160 Pisum sativum HOM05D004110 ORTHO05D004810 4.7e-21 106.3 71 73.2
VMungo0464G1786 Vigna mungo HOM05D004110 ORTHO05D004810 7.9e-21 105.5 102 58.8
BolC8t52466H Brassica oleracea HOM05D004110 ORTHO05D004810 5.5e-14 82.8 51 66.7
HanXRQChr09g0252681 Helianthus annuus HOM05D004110 ORTHO05D004810 5.5e-14 82.8 59 59.3
CBR_g5647 Chara braunii HOM05D004110 ORTHO05D004810 1.1e-11 75.1 66 45.5


User provided reference genes

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