Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 1.6e-222 775.8 394 100.0
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 4.0e-205 718.0 395 93.4
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 3.1e-194 681.8 397 87.7
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 1.0e-184 650.2 397 83.4
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 2.3e-181 639.0 399 81.7
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 9.8e-180 633.6 373 87.4
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.7e-179 632.9 398 81.4
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 3.3e-175 618.6 390 80.0
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 2.1e-174 615.9 397 80.1
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 2.9e-171 605.5 416 75.2
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 1.1e-170 603.6 394 78.2
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 6.9e-157 557.8 347 82.1
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 2.3e-152 542.7 393 71.8
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.1e-151 540.4 400 69.8
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.5e-151 539.3 399 69.7
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.3e-150 537.0 400 69.2
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 4.8e-150 535.0 408 68.6
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 5.8e-148 528.1 393 69.7
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 7.6e-148 527.7 393 69.7
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 7.6e-148 527.7 393 69.7
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 7.6e-148 527.7 402 70.1
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 6.4e-147 524.6 394 69.5
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.5e-143 513.5 393 69.2
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 1.9e-143 513.1 402 68.7
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 2.5e-143 512.7 402 67.4
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 5.6e-143 511.5 413 67.6
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 7.4e-143 511.1 401 68.1
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 2.8e-142 509.2 404 68.6
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 8.1e-142 507.7 409 67.2
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 3.1e-141 505.8 405 66.7
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 9.0e-141 504.2 393 70.0
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 2.6e-140 502.7 403 64.8
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 4.5e-140 501.9 403 64.5
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 1.7e-139 500.0 409 66.7
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 6.4e-139 498.0 403 65.5
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.4e-138 496.9 403 65.3
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 1.6e-137 493.4 400 65.8
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 6.0e-137 491.5 399 63.9
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 7.9e-137 491.1 393 64.1
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.8e-136 490.0 394 64.5
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 2.3e-136 489.6 395 64.3
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 3.0e-136 489.2 395 64.3
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 3.9e-136 488.8 388 64.7
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 5.1e-136 488.4 393 63.9
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 5.1e-136 488.4 392 64.0
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 8.7e-136 487.6 400 64.5
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 3.7e-134 482.3 393 63.4
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 1.5e-132 476.9 411 61.1
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 1.3e-131 473.8 391 66.0
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 6.5e-131 471.5 398 63.1
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 7.1e-130 468.0 396 64.6
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 1.6e-129 466.8 367 68.1
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 3.5e-129 465.7 395 63.0
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 6.7e-128 461.5 395 65.6
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 6.7e-128 461.5 394 64.5
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 6.7e-128 461.5 394 62.9
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 2.5e-127 459.5 398 61.6
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 4.3e-127 458.8 400 62.8
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 1.6e-126 456.8 395 61.5
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 1.1e-125 454.1 409 62.3
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 1.8e-125 453.4 393 62.8
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.8e-125 453.4 422 59.5
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 2.4e-125 453.0 388 63.1
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 9.0e-125 451.1 395 63.8
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 2.6e-124 449.5 377 63.1
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 4.5e-124 448.7 427 57.4
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 1.9e-122 443.4 400 60.8
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 4.2e-122 442.2 400 61.2
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 2.1e-121 439.9 403 58.6
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 2.7e-121 439.5 400 60.2
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 1.0e-120 437.6 388 57.7
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 1.1e-119 434.1 396 58.8
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 1.5e-119 433.7 400 57.5
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 9.7e-119 431.0 349 65.3
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 9.7e-119 431.0 398 58.5
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.8e-118 429.5 334 68.0
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.2e-116 424.1 443 54.2
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 1.0e-115 421.0 407 56.3
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 5.0e-115 418.7 399 58.9
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 2.5e-114 416.4 310 70.6
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.8e-112 410.2 410 56.8
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 3.9e-112 409.1 375 58.7
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.5e-111 407.1 392 56.4
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 3.3e-111 406.0 414 54.8
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.1e-109 399.1 392 56.4
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 2.5e-106 389.8 291 71.1
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 3.9e-104 382.5 338 63.0
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 3.5e-100 369.4 348 55.2
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 3.2e-98 362.8 353 55.2
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 2.7e-97 359.8 409 53.3
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 1.0e-96 357.8 213 86.9
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 2.0e-95 353.6 456 45.4
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 5.3e-93 345.5 265 68.7
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 1.7e-91 340.5 398 44.7
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 8.5e-91 338.2 360 55.3
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 7.2e-90 335.1 428 44.4
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 8.0e-89 331.6 328 58.2
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 8.0e-89 331.6 320 55.0
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-87 327.4 335 57.0
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-87 326.6 337 56.7
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.8e-86 323.2 296 61.8
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.8e-86 322.4 296 61.8
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.8e-86 322.4 296 61.8
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.8e-86 322.4 296 61.8
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 2.4e-77 293.5 198 75.8
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 2.5e-74 283.5 285 58.9
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 8.6e-67 258.5 211 64.9
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 3.6e-57 226.5 588 32.0
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.5e-34 151.4 88 79.5
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 8.1e-33 145.6 176 47.2
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.4e-29 134.8 132 54.5
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 2.1e-28 131.0 209 38.3
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.2e-22 110.9 155 42.6
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.9e-21 107.8 119 48.7
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.1e-12 77.8 62 71.0
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.1e-12 77.8 62 71.0
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.1e-12 77.8 62 71.0
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 9.7e-10 68.9 39 84.6
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 9.7e-10 68.9 57 61.4
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 2.4e-08 64.3 39 79.5
Psat0s2301g0040 Pisum sativum HOM05D006533 ORTHO05D320805 7.7e-07 59.3 78 50.0


User provided reference genes

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