Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 1.4e-151 539.7 279 100.0
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 8.1e-120 434.1 342 73.7
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 7.1e-108 394.4 341 66.9
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 1.5e-105 386.7 339 65.2
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 2.6e-102 375.9 342 64.9
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 2.9e-101 372.5 339 64.6
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 9.3e-100 367.5 330 66.1
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 3.5e-99 365.5 332 65.7
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 2.5e-97 359.4 328 63.7
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 8.1e-96 354.4 268 74.3
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 5.3e-95 351.7 286 69.9
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 5.5e-92 341.7 344 60.5
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 1.6e-88 330.1 297 63.3
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 5.3e-87 325.1 297 62.0
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 1.3e-85 320.5 283 63.3
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 2.9e-85 319.3 297 61.3
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 2.5e-84 316.2 289 61.9
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 4.2e-84 315.5 253 70.4
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 2.1e-83 313.2 282 61.7
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 4.6e-83 312.0 286 60.5
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 1.3e-82 310.5 285 60.4
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 1.3e-82 310.5 292 59.9
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 3.0e-82 309.3 286 60.5
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 5.1e-82 308.5 286 58.7
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 6.7e-82 308.1 301 59.5
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 6.7e-82 308.1 287 60.6
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.1e-81 307.4 287 60.6
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 3.3e-81 305.8 287 59.9
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 7.4e-81 304.7 295 60.3
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 7.4e-81 304.7 285 59.6
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 7.4e-81 304.7 285 59.6
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 2.2e-80 303.1 301 56.8
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.8e-80 302.8 288 59.4
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 6.3e-80 301.6 292 59.2
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 1.8e-79 300.1 288 59.0
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.8e-79 300.1 288 59.0
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 5.3e-79 298.5 334 52.1
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 9.1e-79 297.7 296 56.8
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.2e-78 297.4 288 58.3
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.5e-78 297.0 288 58.7
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 2.0e-78 296.6 290 59.0
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 2.0e-78 296.6 303 58.1
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 2.6e-78 296.2 289 59.5
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.9e-78 295.0 288 58.3
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 7.7e-78 294.7 282 58.2
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 7.7e-78 294.7 282 57.8
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 1.0e-77 294.3 300 57.3
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 1.3e-77 293.9 286 58.4
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 2.2e-77 293.1 288 58.7
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 5.0e-77 292.0 292 58.6
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.5e-76 289.7 304 53.3
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.5e-76 289.7 304 53.3
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 2.7e-75 286.2 284 57.0
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 6.1e-75 285.0 288 57.3
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 6.1e-75 285.0 326 52.8
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 1.0e-74 284.3 281 56.9
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 3.0e-74 282.7 292 55.1
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 3.0e-74 282.7 292 55.1
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 3.0e-74 282.7 281 58.7
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 3.0e-74 282.7 289 54.3
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 5.1e-74 282.0 292 55.5
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 8.8e-74 281.2 293 56.3
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 2.0e-73 280.0 283 55.8
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 2.6e-73 279.6 312 51.9
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 1.3e-72 277.3 284 55.3
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 1.7e-72 276.9 295 53.2
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 2.8e-72 276.2 302 53.3
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 1.1e-71 274.2 284 53.9
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 4.1e-71 272.3 290 54.1
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 5.3e-71 271.9 284 53.5
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 6.9e-71 271.6 281 54.1
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.5e-70 270.4 306 53.6
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 2.0e-70 270.0 305 53.1
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 3.4e-70 269.2 306 54.2
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 2.9e-69 266.2 265 56.6
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 2.9e-69 266.2 306 53.6
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 2.9e-69 266.2 297 52.5
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.1e-68 264.2 282 53.9
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 4.2e-68 262.3 265 56.6
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 5.5e-68 261.9 231 63.6
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 1.6e-67 260.4 287 53.3
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 4.7e-67 258.8 297 51.9
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 1.5e-65 253.8 292 50.0
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 2.2e-64 250.0 291 51.9
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 2.8e-64 249.6 231 59.7
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 2.8e-64 249.6 275 51.3
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 3.7e-64 249.2 230 61.7
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 2.0e-62 243.4 303 50.5
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 7.7e-62 241.5 295 48.1
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 2.7e-46 189.9 281 42.7
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 3.5e-46 189.5 300 41.0
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 4.2e-44 182.6 291 41.9
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 7.2e-44 181.8 348 39.7
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 2.6e-41 173.3 280 43.9
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 7.5e-41 171.8 297 39.4
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 1.3e-40 171.0 141 63.8
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 2.7e-38 163.3 112 74.1
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.9e-36 157.1 200 52.0
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 2.8e-35 153.3 284 38.4
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 2.0e-33 147.1 289 39.1
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 2.2e-32 143.7 111 64.0
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 9.2e-31 138.3 112 66.1
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 8.6e-29 131.7 140 52.1
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 2.8e-27 126.7 184 44.0
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 6.4e-24 115.5 72 77.8
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 8.3e-24 115.2 72 77.8
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 6.0e-22 109.0 189 39.2
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.0e-17 94.0 238 34.9
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 6.0e-14 82.4 50 78.0
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 2.3e-13 80.5 85 47.1
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 8.4e-08 62.0 92 48.9
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 2.7e-06 57.0 229 23.1


User provided reference genes

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