Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G191800 Glycine max HOM05D000835 ORTHO05D014291 3.8e-41 171.0 83 100.0
Glyma.19G111600 Glycine max HOM05D000835 ORTHO05D007655 9.7e-29 129.8 93 72.0
Glyma.09G283700 Glycine max HOM05D000835 ORTHO05D007655 8.2e-28 126.7 93 71.0
Manes.11G105000 Manihot esculenta HOM05D000835 ORTHO05D007655 8.2e-28 126.7 93 69.9
Gohir.A12G232600 Gossypium hirsutum HOM05D000835 ORTHO05D007655 1.1e-27 126.3 93 69.9
Gohir.D12G234800 Gossypium hirsutum HOM05D000835 ORTHO05D007655 1.1e-27 126.3 93 69.9
Gorai.008G251100 Gossypium raimondii HOM05D000835 ORTHO05D007655 1.1e-27 126.3 93 69.9
arahy.Tifrunner.gnm1.ann1.0BXH0B Arachis hypogaea HOM05D000835 ORTHO05D007655 1.4e-27 125.9 93 68.8
arahy.Tifrunner.gnm1.ann1.3FQW2E Arachis hypogaea HOM05D000835 ORTHO05D007655 1.4e-27 125.9 93 68.8
PGR102G2314 Punica granatum HOM05D000835 ORTHO05D007655 1.4e-27 125.9 93 69.9
Prupe.4G129900 Prunus persica HOM05D000835 ORTHO05D007655 2.4e-27 125.2 93 68.8
Thecc.01G127400 Theobroma cacao HOM05D000835 ORTHO05D007655 4.1e-27 124.4 93 68.8
VMungo0647G1181 Vigna mungo HOM05D000835 ORTHO05D007655 7.0e-27 123.6 93 68.8
Atru.chr6.1375 Acer truncatum HOM05D000835 ORTHO05D007655 9.1e-27 123.2 93 68.8
Lalb_Chr11g0073081 Lupinus albus HOM05D000835 ORTHO05D007655 1.6e-26 122.5 93 67.7
MD10G1213300 Malus domestica HOM05D000835 ORTHO05D007655 1.6e-26 122.5 93 66.7
TWI53G1197 Tripterygium wilfordii HOM05D000835 ORTHO05D007655 1.6e-26 122.5 93 68.8
CANSAT54G0347 Cannabis sativa HOM05D000835 ORTHO05D007655 2.0e-26 122.1 93 67.7
Duzib147G1214 Durio zibethinus HOM05D000835 ORTHO05D007655 2.0e-26 122.1 93 66.7
Psat4g027720 Pisum sativum HOM05D000835 ORTHO05D007655 2.0e-26 122.1 93 67.7
Phvul.003G003900 Phaseolus vulgaris HOM05D000835 ORTHO05D007655 2.6e-26 121.7 93 67.7
PGR083G0454 Punica granatum HOM05D000835 ORTHO05D014291 2.6e-26 121.7 93 67.7
CiPaw.13G147400 Carya illinoinensis HOM05D000835 ORTHO05D007655 3.5e-26 121.3 93 66.7
COL.COLO4_14020 Corchorus olitorius HOM05D000835 ORTHO05D007655 3.5e-26 121.3 93 67.7
Aqoxy2G02907 Aquilegia oxysepala HOM05D000835 ORTHO05D007655 7.7e-26 120.2 93 66.7
CSS0030129 Camellia sinensis var. sinensis HOM05D000835 ORTHO05D007655 7.7e-26 120.2 93 66.7
Ca_12421_v3 Cicer arietinum L. HOM05D000835 ORTHO05D007655 1.0e-25 119.8 93 66.7
DCAR_001041 Daucus carota HOM05D000835 ORTHO05D007655 1.0e-25 119.8 93 66.7
Lj2A837G8 Lonicera japonica HOM05D000835 ORTHO05D007655 1.0e-25 119.8 93 65.6
Lj2P836T6 Lonicera japonica HOM05D000835 ORTHO05D014291 1.0e-25 119.8 93 65.6
Medtr4g119340 Medicago truncatula HOM05D000835 ORTHO05D007655 1.3e-25 119.4 93 66.7
Sp3g20670 Schrenkiella parvula HOM05D000835 ORTHO05D007655 1.3e-25 119.4 93 65.6
Aa31LG8G9480 Aethionema arabicum HOM05D000835 ORTHO05D007655 1.7e-25 119.0 93 66.7
AT3G22980 Arabidopsis thaliana HOM05D000835 ORTHO05D007655 1.7e-25 119.0 93 66.7
BcaB06g26420 Brassica carinata HOM05D000835 ORTHO05D007655 1.7e-25 119.0 93 66.7
A05p25720 Brassica napus HOM05D000835 ORTHO05D007655 1.7e-25 119.0 93 66.7
BraA05t21453Z Brassica rapa HOM05D000835 ORTHO05D007655 1.7e-25 119.0 93 66.7
Carub.0003s2314 Capsella rubella HOM05D000835 ORTHO05D007655 1.7e-25 119.0 93 66.7
Eucgr.B02912 Eucalyptus grandis HOM05D000835 ORTHO05D007655 1.7e-25 119.0 93 65.6
SalBow3G1027 Salvia bowleyana HOM05D000835 ORTHO05D007655 1.7e-25 119.0 93 65.6
CARHR098920 Cardamine hirsuta HOM05D000835 ORTHO05D007655 2.2e-25 118.6 93 65.6
ClCG09G010670 Citrullus lanatus HOM05D000835 ORTHO05D007655 2.2e-25 118.6 93 65.6
Thhalv10019976m.g Eutrema salsugineum HOM05D000835 ORTHO05D007655 2.2e-25 118.6 93 65.6
Cpa.g.sc103.45 Carica papaya HOM05D000835 ORTHO05D007655 2.9e-25 118.2 93 65.6
CDE07G0289 Ceratophyllum demersum HOM05D000835 ORTHO05D007655 3.8e-25 117.9 93 66.7
MELO3C013183.2 Cucumis melo HOM05D000835 ORTHO05D007655 3.8e-25 117.9 89 68.5
CsaV3_7G021670 Cucumis sativus L. HOM05D000835 ORTHO05D007655 3.8e-25 117.9 93 65.6
ECA233G2238 Erigeron canadensis HOM05D000835 ORTHO05D007655 3.8e-25 117.9 93 66.7
HPP92_017079 Vanilla planifolia HOM05D000835 ORTHO05D007655 3.8e-25 117.9 93 64.5
BcaC05g27990 Brassica carinata HOM05D000835 ORTHO05D007655 5.0e-25 117.5 93 65.6
C05p40010 Brassica napus HOM05D000835 ORTHO05D007655 5.0e-25 117.5 93 65.6
BolC5t32747H Brassica oleracea HOM05D000835 ORTHO05D007655 5.0e-25 117.5 93 65.6
AL3G37390 Arabidopsis lyrata HOM05D000835 ORTHO05D007655 6.5e-25 117.1 93 64.5
Cfa009920 Carpinus fangiana HOM05D000835 ORTHO05D007655 6.5e-25 117.1 93 64.5
Haze_23278 Corylus avellana HOM05D000835 ORTHO05D007655 6.5e-25 117.1 93 64.5
Lsat_1_v5_gn_8_25560 Lactuca sativa HOM05D000835 ORTHO05D007655 6.5e-25 117.1 93 65.6
QL01p016405 Quercus lobata HOM05D000835 ORTHO05D007655 6.5e-25 117.1 93 64.5
SHI25283 Sapria himalayana HOM05D000835 ORTHO05D007655 8.5e-25 116.7 93 61.3
ATR0697G189 Amborella trichopoda HOM05D000835 ORTHO05D007655 1.1e-24 116.3 93 65.6
arahy.Tifrunner.gnm1.ann1.VLM2CH Arachis hypogaea HOM05D000001 ORTHO05D009948 1.1e-24 116.3 93 64.5
Lj1g0017347 Lotus japonicus HOM05D000835 ORTHO05D007655 1.1e-24 116.3 93 65.6
EL10Ac7g16262 Beta vulgaris HOM05D000835 ORTHO05D007655 1.5e-24 115.9 93 66.7
Actinidia12903 Actinidia chinensis HOM05D000835 ORTHO05D007655 1.9e-24 115.5 89 68.5
HanXRQChr08g0217071 Helianthus annuus HOM05D000835 ORTHO05D007655 1.9e-24 115.5 93 64.5
Rhsim08G0237400 Rhododendron simsii HOM05D000835 ORTHO05D007655 3.2e-24 114.8 93 64.5
AUR62020200 Chenopodium quinoa HOM05D000835 ORTHO05D007655 4.2e-24 114.4 93 64.5
AUR62001583 Chenopodium quinoa HOM05D000835 ORTHO05D007655 5.5e-24 114.0 93 64.5
Dinv32150 Davidia involucrata HOM05D000835 ORTHO05D007655 5.5e-24 114.0 93 63.4
Sed0018542 Sechium edule HOM05D000835 ORTHO05D007655 5.5e-24 114.0 93 64.5
TAR374G1323 Trochodendron aralioides HOM05D000835 ORTHO05D007655 5.5e-24 114.0 89 68.5
Cc01_g07990 Coffea canephora HOM05D000835 ORTHO05D007655 7.2e-24 113.6 93 64.5
FvH4_3g14510 Fragaria vesca HOM05D000835 ORTHO05D007655 9.4e-24 113.2 93 63.4
FAN21G3290 Fragaria x ananassa HOM05D000835 ORTHO05D007655 9.4e-24 113.2 93 63.4
FAN25G3716 Fragaria x ananassa HOM05D000835 ORTHO05D007655 9.4e-24 113.2 93 63.4
Mapoly0095s0055 Marchantia polymorpha HOM05D000835 ORTHO05D007655 9.4e-24 113.2 93 63.4
Oeu051478.1 Olea europaea HOM05D000835 ORTHO05D007655 9.4e-24 113.2 93 63.4
TPR.G14630 Trifolium pratense HOM05D000835 ORTHO05D007655 1.2e-23 112.8 93 63.4
SGA_v2.0_scaffold12G06248 Striga asiatica HOM05D000835 ORTHO05D007655 1.6e-23 112.5 93 64.5
FAN11G2664 Fragaria x ananassa HOM05D000835 ORTHO05D007655 2.1e-23 112.1 93 62.4
FAN16G0727 Fragaria x ananassa HOM05D000835 ORTHO05D007655 2.1e-23 112.1 93 62.4
RcHm_v2.0_Chr6g0274771 Rosa chinensis HOM05D000835 ORTHO05D007655 3.6e-23 111.3 93 63.4
MSTRG.10400 Avicennia marina HOM05D000835 ORTHO05D007655 8.0e-23 110.2 93 62.4
Hma1.2p1_1811F.1_g303580 Hydrangea macrophylla HOM05D000835 ORTHO05D007655 1.4e-22 109.4 89 64.0
Sc11g0003980 Simmondsia chinensis HOM05D000835 ORTHO05D007655 1.8e-22 109.0 93 61.3
Pp3c17_21830 Physcomitrium patens HOM05D000835 ORTHO05D007655 2.3e-22 108.6 93 61.3
Potri.009G152500 Populus trichocarpa HOM05D000835 ORTHO05D007655 2.3e-22 108.6 93 61.3
Sabra09G0120400 Salix brachista HOM05D000835 ORTHO05D007655 2.3e-22 108.6 93 61.3
Migut.G00793 Erythranthe guttata HOM05D000835 ORTHO05D007655 3.0e-22 108.2 93 60.2
unitig_27.g25353 Utricularia gibba HOM05D000835 ORTHO05D007655 4.0e-22 107.8 93 62.4
PSO210G1464 Papaver somniferum HOM05D000835 ORTHO05D007655 5.2e-22 107.5 93 62.4
PSO238G0019 Papaver somniferum HOM05D000835 ORTHO05D007655 5.2e-22 107.5 93 62.4
SMO367G1260 Selaginella moellendorffii HOM05D000835 ORTHO05D007655 8.8e-22 106.7 93 60.2
AagrBONN_evm.TU.Sc2ySwM_362.224 Anthoceros agrestis HOM05D000835 ORTHO05D007655 1.1e-21 106.3 93 58.1
Ciclev10030601m.g Citrus clementina HOM05D000835 ORTHO05D007655 1.1e-21 106.3 93 62.4
FAN12G0217 Fragaria x ananassa HOM05D000835 ORTHO05D007655 2.0e-21 105.5 93 58.1
MBI04_g45346_MAGBIO Magnolia biondii HOM05D000835 ORTHO05D014291 2.0e-21 105.5 91 61.5
Os03g0650700 Oryza sativa ssp. japonica HOM05D000835 ORTHO05D007655 2.0e-21 105.5 93 57.0
SEGI_39423 Sequoiadendron giganteum HOM05D000835 ORTHO05D007655 2.6e-21 105.1 93 59.1
Peaxi162Scf00259g00019 Petunia axillaris HOM05D000835 ORTHO05D007655 3.3e-21 104.8 93 58.1
Ah.08g222340 Amaranthus hybridus HOM05D000835 ORTHO05D007655 5.7e-21 104.0 93 61.3
Ca_13611_v3 Cicer arietinum L. HOM05D000835 ORTHO05D007655 5.7e-21 104.0 92 58.7
CAN.G742.24 Capsicum annuum HOM05D000835 ORTHO05D007655 7.5e-21 103.6 93 57.0
PSO801G0441 Papaver somniferum HOM05D000835 ORTHO05D007655 7.5e-21 103.6 93 61.3
Zm00001eb052970 Zea mays HOM05D000835 ORTHO05D007655 7.5e-21 103.6 93 55.9
CBR_g53556 Chara braunii HOM05D000835 ORTHO05D007655 1.7e-20 102.4 93 54.8
Solyc11g071770.1 Solanum lycopersicum HOM05D000835 ORTHO05D007655 1.7e-20 102.4 93 57.0
Nitab4.5_0002426g0040 Nicotiana tabacum HOM05D000835 ORTHO05D007655 2.2e-20 102.1 93 57.0
Nitab4.5_0002498g0060 Nicotiana tabacum HOM05D000835 ORTHO05D007655 2.2e-20 102.1 93 57.0
Sopen11g029440 Solanum pennellii HOM05D000835 ORTHO05D007655 3.7e-20 101.3 93 55.9
FvH4_4g04801 Fragaria vesca HOM05D000835 ORTHO05D014291 1.1e-19 99.8 88 59.1
PGSC0003DMG400002992 Solanum tuberosum HOM05D000835 ORTHO05D007655 2.4e-19 98.6 93 54.8
FAN22G1188 Fragaria x ananassa HOM05D000835 ORTHO05D007655 3.1e-19 98.2 93 57.0
Os02g0543300 Oryza sativa ssp. japonica HOM05D000835 ORTHO05D007655 7.7e-18 93.6 93 51.6
MCO13G577 Micromonas commoda HOM05D000835 ORTHO05D007655 4.7e-15 84.3 89 50.6
Cre13.g564950 Chlamydomonas reinhardtii HOM05D000835 ORTHO05D007655 1.7e-12 75.9 93 46.2
Cfa025935 Carpinus fangiana HOM05D000835 ORTHO05D007655 1.8e-11 72.4 97 42.3
PRCOL_00005628 Prasinoderma coloniale HOM05D000835 ORTHO05D007655 2.0e-10 68.9 95 43.2
Actinidia03988 Actinidia chinensis HOM05D000835 ORTHO05D014291 2.1e-07 58.9 62 48.4
Nn7g38301 Nelumbo nucifera HOM05D000835 ORTHO05D007655 1.0e-06 56.6 61 47.5
GSVIVG01026440001 Vitis vinifera HOM05D000835 ORTHO05D007655 1.4e-06 56.2 66 51.5
Ciclev10029986m.g Citrus clementina HOM05D000835 ORTHO05D014291 3.0e-06 55.1 27 92.6


User provided reference genes

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