Gene: AT3G22980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G22980
  • Transcript Identifier AT3G22980.2
  • Gene Type Coding gene
  • Location Chr3 : 8160269-8163316 : negative

Gene Family Information

  • ID HOM05D000835
  • #Genes/#Species 712/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G22980.2
  • uniprot F4J2T9

Descriptions

  • Description Ribosomal protein S5/Elongation factor G/III/V family protein
  • Computational description Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 75542 Blast hits to 60298 proteins in 6538 species: Archae - 1481; Bacteria - 47710; Metazoa - 4520; Fungi - 3401; Plants - 1472; Viruses - 1; Other Eukaryotes - 16957 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042256
IBA
Gene Ontologymature ribosome assembly1
GO:0006414
IEA
GOA Databasetranslational elongation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IBA
Gene OntologyGTPase activity1
GO:0003924
IEA
InterProGTPase activity
GO:0043022
IBA
Gene Ontologyribosome binding1
GO:0003746
IEA
GOA Databasetranslation elongation factor activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:1990904
IBA
Gene Ontologyribonucleoprotein complex1
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
IBA
Gene Ontologycytosol1
GO:0005840
IEA
GOA Databaseribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR009000 Translation protein, beta-barrel domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000640 Elongation factor EFG, domain V-like
IPR041095 Elongation Factor G, domain II
IPR000795 Translational (tr)-type GTP-binding domain
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR035647 EF-G domain III/V-like
Mapman id Description
17.1.2.2.3.4 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.elongation-factor-like regulatory GTPase (Efl1)