Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 2.9e-199 698.4 357 100.0
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 3.4e-187 658.3 357 94.1
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 1.0e-183 646.7 357 93.3
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 3.1e-180 635.2 357 91.6
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 6.4e-170 600.9 357 86.6
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 5.4e-169 597.8 357 86.3
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 1.0e-167 593.6 357 87.4
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 1.7e-162 576.2 357 83.5
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 6.4e-162 574.3 357 83.5
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 1.9e-161 572.8 358 84.6
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 4.6e-160 568.2 341 86.2
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 6.0e-160 567.8 372 81.2
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 2.4e-156 555.8 369 80.8
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 4.6e-152 541.6 308 90.3
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 1.9e-142 509.6 357 75.1
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 5.6e-142 508.1 357 74.8
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 9.6e-142 507.3 357 75.6
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 1.6e-141 506.5 358 76.0
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 2.8e-141 505.8 356 74.2
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 4.0e-140 501.9 361 74.8
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 1.2e-139 500.4 359 73.5
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 1.5e-139 500.0 358 75.4
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 4.5e-139 498.4 303 83.8
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 1.0e-138 497.3 357 73.4
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 4.9e-138 495.0 357 73.9
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 1.1e-137 493.8 365 73.7
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 1.9e-137 493.0 344 76.5
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 1.9e-137 493.0 357 72.3
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 2.1e-136 489.6 288 86.1
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 3.5e-136 488.8 303 82.5
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 4.6e-136 488.4 313 80.2
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.0e-135 487.3 357 72.0
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 1.0e-135 487.3 363 73.0
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 1.8e-135 486.5 310 79.7
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 3.9e-135 485.3 365 71.5
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 3.9e-135 485.3 364 71.7
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 6.7e-135 484.6 303 81.2
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.5e-134 483.4 357 71.4
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 5.7e-134 481.5 364 71.2
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 7.4e-134 481.1 357 73.9
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 4.8e-133 478.4 327 76.8
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 1.4e-132 476.9 357 71.4
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 3.1e-132 475.7 327 76.1
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 4.1e-132 475.3 345 72.5
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 4.1e-132 475.3 357 70.6
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 1.5e-131 473.4 302 82.8
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 5.0e-130 468.4 300 82.3
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 8.5e-130 467.6 309 78.3
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 1.1e-129 467.2 306 77.8
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 1.4e-129 466.8 360 68.1
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 1.9e-129 466.5 344 71.2
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 2.5e-129 466.1 302 78.1
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 4.2e-129 465.3 357 70.9
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 2.1e-128 463.0 357 70.6
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 3.6e-128 462.2 291 81.8
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 6.1e-128 461.5 351 71.2
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 7.9e-128 461.1 298 80.2
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 1.0e-127 460.7 302 79.1
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 2.3e-127 459.5 324 75.3
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 3.0e-127 459.1 358 71.5
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 6.7e-127 458.0 359 68.2
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 1.1e-126 457.2 360 66.7
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 1.5e-126 456.8 358 70.1
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 3.3e-126 455.7 360 66.9
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 4.3e-126 455.3 319 73.4
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 5.7e-126 454.9 346 67.3
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 9.7e-126 454.1 317 72.9
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 2.2e-125 453.0 323 71.8
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 6.3e-125 451.4 302 75.5
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 6.3e-125 451.4 302 75.5
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 8.2e-125 451.1 323 71.8
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 1.1e-124 450.7 363 66.4
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 1.4e-124 450.3 302 75.2
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 1.4e-124 450.3 289 81.3
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 1.8e-124 449.9 325 72.9
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 2.4e-124 449.5 318 73.3
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 2.0e-123 446.4 364 66.8
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 5.9e-123 444.9 302 77.2
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 7.7e-123 444.5 357 68.1
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 7.7e-123 444.5 346 70.8
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.7e-122 443.4 357 69.5
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 3.8e-122 442.2 357 66.7
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 1.9e-121 439.9 287 80.8
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 1.9e-121 439.9 354 67.2
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 2.5e-121 439.5 281 80.8
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 2.5e-121 439.5 346 67.9
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 2.5e-121 439.5 308 75.6
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 7.2e-121 438.0 349 68.8
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 1.0e-119 434.1 273 81.0
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 3.3e-118 429.1 355 66.2
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 1.3e-117 427.2 363 63.6
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 3.7e-117 425.6 242 91.7
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 3.1e-116 422.5 302 71.9
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 9.1e-116 421.0 354 64.7
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 9.1e-116 421.0 359 64.3
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 1.5e-115 420.2 328 69.5
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 4.5e-115 418.7 355 64.2
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 7.7e-115 417.9 354 64.4
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 3.8e-114 415.6 354 64.1
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 5.0e-114 415.2 323 69.3
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 8.5e-114 414.5 354 64.7
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 7.2e-113 411.4 326 67.8
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 7.2e-113 411.4 297 74.4
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 2.1e-112 409.8 289 73.4
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 2.1e-112 409.8 297 74.1
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 1.8e-111 406.8 297 71.4
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 5.2e-111 405.2 260 78.8
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 5.7e-110 401.7 298 70.8
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 9.1e-108 394.4 262 76.7
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 4.5e-107 392.1 260 77.3
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 7.7e-107 391.3 299 68.6
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 2.2e-106 389.8 258 77.1
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 1.9e-105 386.7 257 77.0
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 3.6e-104 382.5 258 75.2
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 1.4e-103 380.6 261 73.2
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 3.0e-103 379.4 356 59.8
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 6.7e-103 378.3 356 62.1
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 1.2e-99 367.5 323 61.6
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 4.2e-97 359.0 245 75.5
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 5.9e-91 338.6 252 67.9
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 2.3e-87 326.6 256 63.3
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 6.8e-87 325.1 302 62.3
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 1.3e-82 310.8 177 93.8
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 3.2e-76 289.7 270 56.7
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 1.5e-70 270.8 304 55.9
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 1.1e-68 264.6 191 75.9
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 7.0e-68 261.9 208 66.3
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 2.7e-51 206.8 157 68.8
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 2.9e-45 186.8 120 73.3
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 7.1e-44 182.2 103 90.3
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 2.9e-37 160.2 103 79.6
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 2.9e-37 160.2 103 79.6
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 4.8e-32 142.9 125 61.6
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 2.2e-21 107.5 63 82.5
Actinidia29179 Actinidia chinensis HOM05D005591 ORTHO05D007131 1.1e-20 105.1 60 93.3
Ca_28569_v3 Cicer arietinum L. HOM05D005591 ORTHO05D149412 3.2e-20 103.6 192 32.8
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 4.2e-12 76.6 43 79.1


User provided reference genes

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