Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.09G231100 Glycine max HOM05D005164 ORTHO05D006398 2.4e-218 761.9 398 100.0
Glyma.12G005400 Glycine max HOM05D005164 ORTHO05D006398 1.0e-216 756.5 398 99.2
VMungo1127G0366 Vigna mungo HOM05D005164 ORTHO05D006398 8.9e-213 743.4 398 97.2
Phvul.011G006200 Phaseolus vulgaris HOM05D005164 ORTHO05D006398 5.8e-212 740.7 398 97.0
Ca_25003_v3 Cicer arietinum L. HOM05D005164 ORTHO05D006398 2.4e-210 735.3 398 96.0
Lj3g0003260 Lotus japonicus HOM05D005164 ORTHO05D006398 2.1e-209 732.3 398 95.7
Medtr0173s0030 Medicago truncatula HOM05D005164 ORTHO05D006398 3.3e-207 724.9 398 95.0
Psat3g167280 Pisum sativum HOM05D005164 ORTHO05D006398 4.7e-206 721.1 398 94.5
QL02p007897 Quercus lobata HOM05D005164 ORTHO05D006398 3.4e-204 714.9 397 93.5
COL.COLO4_26343 Corchorus olitorius HOM05D005164 ORTHO05D006398 1.3e-203 713.0 398 93.2
Duzib041G0411 Durio zibethinus HOM05D005164 ORTHO05D006398 1.3e-203 713.0 398 93.0
Thecc.08G024200 Theobroma cacao HOM05D005164 ORTHO05D006398 2.9e-203 711.8 398 92.7
Cfa018135 Carpinus fangiana HOM05D005164 ORTHO05D006398 1.1e-202 709.9 398 92.7
Gohir.A03G078200 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.4e-202 709.5 398 92.7
Potri.014G180800 Populus trichocarpa HOM05D005164 ORTHO05D006398 1.4e-202 709.5 398 93.0
CiPaw.15G075600 Carya illinoinensis HOM05D005164 ORTHO05D006398 2.4e-202 708.8 398 93.0
Ciclev10001386m.g Citrus clementina HOM05D005164 ORTHO05D006398 2.4e-202 708.8 398 92.7
Manes.18G028500 Manihot esculenta HOM05D005164 ORTHO05D006398 2.4e-202 708.8 398 93.2
CiPaw.16G055400 Carya illinoinensis HOM05D005164 ORTHO05D006398 3.2e-202 708.4 398 92.7
Gohir.D02G094300 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.1e-202 708.0 398 92.5
Gorai.005G107200 Gossypium raimondii HOM05D005164 ORTHO05D006398 4.1e-202 708.0 398 92.5
Potri.002G263200 Populus trichocarpa HOM05D005164 ORTHO05D006398 1.6e-201 706.1 398 92.2
MELO3C003848.2 Cucumis melo HOM05D005164 ORTHO05D006398 7.8e-201 703.7 398 92.2
CsaV3_3G045000 Cucumis sativus L. HOM05D005164 ORTHO05D006398 7.8e-201 703.7 398 92.2
GSVIVG01009684001 Vitis vinifera HOM05D005164 ORTHO05D006398 1.7e-200 702.6 398 92.7
Eucgr.F01909 Eucalyptus grandis HOM05D005164 ORTHO05D006398 3.9e-200 701.4 398 91.2
Dinv36062 Davidia involucrata HOM05D005164 ORTHO05D006398 5.1e-200 701.0 398 92.0
Sc02g0006310 Simmondsia chinensis HOM05D005164 ORTHO05D006398 1.5e-199 699.5 398 90.2
CANSAT64G0480 Cannabis sativa HOM05D005164 ORTHO05D006398 4.3e-199 698.0 398 91.2
TWI56G0324 Tripterygium wilfordii HOM05D005164 ORTHO05D006398 4.3e-199 698.0 398 91.2
RcHm_v2.0_Chr6g0300751 Rosa chinensis HOM05D005164 ORTHO05D006398 5.6e-199 697.6 398 90.7
Peaxi162Scf00690g00117 Petunia axillaris HOM05D005164 ORTHO05D006398 1.6e-198 696.0 398 90.7
MSTRG.24294 Avicennia marina HOM05D005164 ORTHO05D006398 2.1e-198 695.7 398 90.2
Gohir.A05G260000 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.1e-198 695.7 398 90.5
SalBow8G2733 Salvia bowleyana HOM05D005164 ORTHO05D006398 6.2e-198 694.1 398 89.9
Lj4C784T1 Lonicera japonica HOM05D005164 ORTHO05D006398 1.1e-197 693.3 398 91.0
Sed0021376 Sechium edule HOM05D005164 ORTHO05D006398 1.1e-197 693.3 398 90.7
CANSAT25G0119 Cannabis sativa HOM05D005164 ORTHO05D006398 1.4e-197 693.0 403 89.8
EL10Ac8g20456 Beta vulgaris HOM05D005164 ORTHO05D006398 1.8e-197 692.6 398 89.2
HanXRQChr02g0040181 Helianthus annuus HOM05D005164 ORTHO05D006398 1.8e-197 692.6 398 90.7
Solyc04g080160.3 Solanum lycopersicum HOM05D005164 ORTHO05D006398 2.4e-197 692.2 398 89.4
Sopen04g033750 Solanum pennellii HOM05D005164 ORTHO05D006398 2.4e-197 692.2 398 89.4
PGR031G3751 Punica granatum HOM05D005164 ORTHO05D006398 5.2e-197 691.0 398 90.7
PGSC0003DMG400005163 Solanum tuberosum HOM05D005164 ORTHO05D006398 6.8e-197 690.6 398 89.2
Gohir.D05G261900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.2e-196 689.9 398 89.9
Sed0001534 Sechium edule HOM05D005164 ORTHO05D006398 1.2e-196 689.9 399 90.7
Cc10_g03080 Coffea canephora HOM05D005164 ORTHO05D006398 2.6e-196 688.7 398 89.9
TAR376G0296 Trochodendron aralioides HOM05D005164 ORTHO05D006398 2.6e-196 688.7 398 90.2
FvH4_2g40000 Fragaria vesca HOM05D005164 ORTHO05D006398 5.8e-196 687.6 399 89.2
FAN27G0257 Fragaria x ananassa HOM05D005164 ORTHO05D006398 5.8e-196 687.6 399 89.2
Lsat_1_v5_gn_1_17561 Lactuca sativa HOM05D005164 ORTHO05D006398 7.6e-196 687.2 398 89.9
Nn5g29540 Nelumbo nucifera HOM05D005164 ORTHO05D006398 7.6e-196 687.2 398 89.2
Gorai.002G128900 Gossypium raimondii HOM05D005164 ORTHO05D006398 9.9e-196 686.8 398 88.7
FAN15G2586 Fragaria x ananassa HOM05D005164 ORTHO05D006398 1.7e-195 686.0 399 89.0
Gorai.009G273800 Gossypium raimondii HOM05D005164 ORTHO05D006398 2.9e-195 685.3 401 89.3
Hund21200 Selenicereus undatus HOM05D005164 ORTHO05D006398 2.9e-195 685.3 398 89.2
Gohir.D01G104900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.9e-195 684.5 398 88.7
Gohir.A01G116500 Gossypium hirsutum HOM05D005164 ORTHO05D006398 8.4e-195 683.7 398 88.9
DCAR_019523 Daucus carota HOM05D005164 ORTHO05D006398 1.1e-194 683.3 398 89.2
ECA247G1488 Erigeron canadensis HOM05D005164 ORTHO05D006398 1.1e-194 683.3 398 90.2
AUR62014895 Chenopodium quinoa HOM05D005164 ORTHO05D006398 2.4e-194 682.2 398 88.4
ATR0733G076 Amborella trichopoda HOM05D005164 ORTHO05D006398 4.2e-194 681.4 398 88.2
FAN20G1227 Fragaria x ananassa HOM05D005164 ORTHO05D006398 5.4e-194 681.0 399 88.2
Aqoxy6G01049 Aquilegia oxysepala HOM05D005164 ORTHO05D006398 1.6e-193 679.5 398 87.9
THA.LOC104814156 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 1.7e-192 676.0 399 87.7
THA.LOC104822841 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 1.7e-192 676.0 398 87.4
MD08G1033300 Malus domestica HOM05D005164 ORTHO05D006398 2.3e-192 675.6 398 87.7
CAN.G1126.40 Capsicum annuum HOM05D005164 ORTHO05D006398 8.7e-192 673.7 398 87.4
Migut.N00498 Erythranthe guttata HOM05D005164 ORTHO05D006398 1.9e-191 672.5 398 87.4
MD15G1029900 Malus domestica HOM05D005164 ORTHO05D006398 8.1e-190 667.2 406 85.7
Haze_17990 Corylus avellana HOM05D005164 ORTHO05D006398 1.5e-188 662.9 501 73.9
ClCG05G019140 Citrullus lanatus HOM05D005164 ORTHO05D006398 4.4e-188 661.4 398 88.2
CDE02G4403 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 1.3e-187 659.8 398 85.9
AUR62031100 Chenopodium quinoa HOM05D005164 ORTHO05D006398 1.1e-186 656.8 398 85.9
Os03g0197400 Oryza sativa ssp. japonica HOM05D005164 ORTHO05D006398 1.9e-186 656.0 400 84.5
Oeu009868.2 Olea europaea HOM05D005164 ORTHO05D006398 2.7e-185 652.1 477 74.8
Carub.0008s0578 Capsella rubella HOM05D005164 ORTHO05D006398 3.5e-185 651.7 398 83.9
Prupe.1G381600 Prunus persica HOM05D005164 ORTHO05D006398 3.5e-185 651.7 398 86.2
Sp2g07720 Schrenkiella parvula HOM05D005164 ORTHO05D006398 1.0e-184 650.2 398 84.4
unitig_22.g6774 Utricularia gibba HOM05D005164 ORTHO05D006398 1.0e-184 650.2 392 85.5
CARHR181050 Cardamine hirsuta HOM05D005164 ORTHO05D006398 1.3e-184 649.8 398 84.4
AT5G42970 Arabidopsis thaliana HOM05D005164 ORTHO05D006398 3.0e-184 648.7 398 84.2
Hma1.2p1_0023F.1_g014900 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 1.1e-183 646.7 490 73.5
Sabra14G0141000 Salix brachista HOM05D005164 ORTHO05D006398 1.1e-183 646.7 437 81.2
A06p48120 Brassica napus HOM05D005164 ORTHO05D006398 4.3e-183 644.8 398 83.7
BraA06t27681Z Brassica rapa HOM05D005164 ORTHO05D006398 4.3e-183 644.8 398 83.7
Thhalv10003436m.g Eutrema salsugineum HOM05D005164 ORTHO05D006398 5.6e-183 644.4 398 84.2
BcaC06g31734 Brassica carinata HOM05D005164 ORTHO05D006398 7.3e-183 644.0 398 83.4
CDE01G0241 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 7.3e-183 644.0 402 83.6
Rhsim06G0035000 Rhododendron simsii HOM05D005164 ORTHO05D006398 2.1e-182 642.5 418 82.8
AL8G17800 Arabidopsis lyrata HOM05D005164 ORTHO05D006398 2.8e-182 642.1 398 82.9
BcaC02g10785 Brassica carinata HOM05D005164 ORTHO05D006398 3.6e-182 641.7 398 83.4
C04p25110 Brassica napus HOM05D005164 ORTHO05D006398 3.6e-182 641.7 398 83.4
BolC4t24015H Brassica oleracea HOM05D005164 ORTHO05D006398 3.6e-182 641.7 398 83.4
Aa31LG9G13090 Aethionema arabicum HOM05D005164 ORTHO05D006398 6.2e-182 641.0 398 84.4
A02p27610 Brassica napus HOM05D005164 ORTHO05D006398 6.2e-182 641.0 398 83.4
BolC2t10406H Brassica oleracea HOM05D005164 ORTHO05D006398 6.2e-182 641.0 398 83.4
BraA02t07794Z Brassica rapa HOM05D005164 ORTHO05D006398 6.2e-182 641.0 398 83.4
Zm00001eb008060 Zea mays HOM05D005164 ORTHO05D006398 8.1e-182 640.6 440 77.5
BcaB07g30597 Brassica carinata HOM05D005164 ORTHO05D006398 3.1e-181 638.6 398 82.7
BcaC03g16546 Brassica carinata HOM05D005164 ORTHO05D006398 3.1e-181 638.6 398 83.2
C02p43640 Brassica napus HOM05D005164 ORTHO05D006398 3.1e-181 638.6 398 83.2
Nitab4.5_0000110g0500 Nicotiana tabacum HOM05D005164 ORTHO05D006398 1.2e-180 636.7 398 83.9
Nitab4.5_0010187g0010 Nicotiana tabacum HOM05D005164 ORTHO05D006398 2.4e-178 629.0 398 83.4
SGA_v2.0_scaffold326G48708 Striga asiatica HOM05D005164 ORTHO05D006398 4.2e-178 628.2 355 90.7
PSO675G3600 Papaver somniferum HOM05D005164 ORTHO05D006398 5.4e-178 627.9 398 81.4
Actinidia22558 Actinidia chinensis HOM05D005164 ORTHO05D006398 1.6e-177 626.3 368 89.7
PSO541G6137 Papaver somniferum HOM05D005164 ORTHO05D006398 2.1e-177 625.9 398 80.9
Hma1.2p1_0469F.1_g159190 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 6.0e-177 624.4 439 78.4
Atru.chr13.515 Acer truncatum HOM05D005164 ORTHO05D006398 1.1e-175 620.2 354 92.1
TPR.G3648 Trifolium pratense HOM05D005164 ORTHO05D006398 1.1e-175 620.2 387 86.6
Manes.05G161900 Manihot esculenta HOM05D005164 ORTHO05D006398 1.6e-174 616.3 354 90.4
Mapoly0072s0034 Marchantia polymorpha HOM05D005164 ORTHO05D006398 1.3e-171 606.7 398 76.4
MBI17_g39721_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 2.2e-171 605.9 431 77.3
Pp3c5_28450 Physcomitrium patens HOM05D005164 ORTHO05D006398 2.1e-166 589.3 398 75.1
SMO364G0673 Selaginella moellendorffii HOM05D005164 ORTHO05D006398 3.1e-165 585.5 398 74.4
AagrBONN_evm.TU.Sc2ySwM_117.2514 Anthoceros agrestis HOM05D005164 ORTHO05D006398 9.0e-165 583.9 397 73.6
vmacro21627 Vaccinium macrocarpon HOM05D005164 ORTHO05D006398 4.8e-158 561.6 398 77.6
Duzib093G0265 Durio zibethinus HOM05D005164 ORTHO05D006398 3.3e-151 538.9 398 74.6
CBR_g36268 Chara braunii HOM05D005164 ORTHO05D006398 3.2e-146 522.3 396 67.7
HPP92_024905 Vanilla planifolia HOM05D005164 ORTHO05D006398 3.0e-144 515.8 347 77.8
Actinidia15313 Actinidia chinensis HOM05D005164 ORTHO05D006398 3.1e-141 505.8 419 68.3
CSS0020238 Camellia sinensis var. sinensis HOM05D005164 ORTHO05D006398 1.2e-137 493.8 271 94.1
CAN.G416.53 Capsicum annuum HOM05D005164 ORTHO05D006398 6.3e-126 454.9 312 77.6
RcHm_v2.0_Chr2g0166611 Rosa chinensis HOM05D005164 ORTHO05D006398 1.4e-112 410.6 226 93.4
Cre11.g478240 Chlamydomonas reinhardtii HOM05D005164 ORTHO05D006398 9.8e-111 404.4 393 53.9
MCO16G668 Micromonas commoda HOM05D005164 ORTHO05D006398 1.0e-104 384.4 401 51.1
Cpa.g.sc64.68 Carica papaya HOM05D005164 ORTHO05D006398 3.2e-101 372.9 216 90.7
PRCOL_00006114 Prasinoderma coloniale HOM05D005164 ORTHO05D006398 1.2e-87 327.8 400 47.2
SEGI_27147 Sequoiadendron giganteum HOM05D005164 ORTHO05D006398 1.9e-85 320.5 214 77.1
Sopen04g033730 Solanum pennellii HOM05D005164 ORTHO05D006398 3.6e-81 306.2 214 75.2
GSVIVG01023193001 Vitis vinifera HOM05D005164 ORTHO05D006398 1.3e-65 254.6 150 90.7
GSVIVG01003780001 Vitis vinifera HOM05D005164 ORTHO05D006398 6.2e-65 252.3 150 89.3
Cfa024373 Carpinus fangiana HOM05D005164 ORTHO05D006398 9.0e-56 221.9 317 41.0
MBI17_g35116_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 4.9e-54 216.1 183 67.8
Carub.0004s0266 Capsella rubella HOM05D005164 ORTHO05D006398 9.6e-50 201.8 146 70.5
arahy.Tifrunner.gnm1.ann1.ABX6XB Arachis hypogaea HOM05D005164 ORTHO05D006398 1.2e-44 184.9 243 52.7
Haze_26904 Corylus avellana HOM05D005164 ORTHO05D006398 1.2e-39 168.3 205 43.4
arahy.Tifrunner.gnm1.ann1.D3INNH Arachis hypogaea HOM05D005164 ORTHO05D006398 4.5e-39 166.4 95 92.6
arahy.Tifrunner.gnm1.ann1.R33BY8 Arachis hypogaea HOM05D005164 ORTHO05D006398 4.5e-39 166.4 95 92.6
TPR.G136 Trifolium pratense HOM05D005164 ORTHO05D006398 1.3e-17 95.1 49 89.8
arahy.Tifrunner.gnm1.ann1.ZV61IE Arachis hypogaea HOM05D005164 ORTHO05D006398 5.3e-16 89.7 66 77.3
arahy.Tifrunner.gnm1.ann1.2K5AT5 Arachis hypogaea HOM05D005164 ORTHO05D006398 3.4e-10 70.5 42 85.7
Medtr2g034320 Medicago truncatula HOM05D058003 ORTHO05D259935 2.2e-06 57.8 88 45.5


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