Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.08G239150 Glycine max HOM05D001972 ORTHO05D215650 3.0e-76 288.5 153 100.0
Glyma.12G001300 Glycine max HOM05D001972 ORTHO05D002555 1.4e-60 236.5 152 84.2
VMungo1127G0180 Vigna mungo HOM05D001972 ORTHO05D002555 1.4e-28 130.2 151 55.0
Phvul.011G001400 Phaseolus vulgaris HOM05D001972 ORTHO05D002555 2.0e-27 126.3 148 56.1
Lj4g0017507 Lotus japonicus HOM05D001972 ORTHO05D002555 1.3e-15 87.0 186 41.4
Lj3g0003549 Lotus japonicus HOM05D001972 ORTHO05D002555 6.6e-15 84.7 139 46.8
CiPaw.05G101100 Carya illinoinensis HOM05D001972 ORTHO05D002555 4.6e-08 62.0 55 58.2
ClCG04G002400 Citrullus lanatus HOM05D001972 ORTHO05D002555 1.0e-07 60.8 67 52.2
Hund02511 Selenicereus undatus HOM05D001972 ORTHO05D002555 1.7e-07 60.1 121 37.2
Atru.chr9.950 Acer truncatum HOM05D001972 ORTHO05D002555 2.3e-07 59.7 46 63.0
Duzib205G0907 Durio zibethinus HOM05D001972 ORTHO05D002555 2.3e-07 59.7 72 50.0
Actinidia30588 Actinidia chinensis HOM05D001972 ORTHO05D002555 3.0e-07 59.3 75 50.7
CsaV3_4G030410 Cucumis sativus L. HOM05D001972 ORTHO05D002555 3.0e-07 59.3 49 59.2
CiPaw.12G000900 Carya illinoinensis HOM05D001972 ORTHO05D002555 3.9e-07 58.9 153 37.3
MELO3C008906.2 Cucumis melo HOM05D001972 ORTHO05D002555 3.9e-07 58.9 58 55.2
MELO3C022550.2 Cucumis melo HOM05D001972 ORTHO05D002555 6.6e-07 58.2 43 62.8
MBI10_g32323_MAGBIO Magnolia biondii HOM05D001972 ORTHO05D002555 1.1e-06 57.4 89 43.8
Rhsim08G0197800 Rhododendron simsii HOM05D001972 ORTHO05D002555 1.1e-06 57.4 151 37.1
Gorai.007G004600 Gossypium raimondii HOM05D001972 ORTHO05D002555 2.5e-06 56.2 121 36.4
Psat2g002120 Pisum sativum HOM05D001972 ORTHO05D002555 2.5e-06 56.2 69 44.9
CiPaw.06G109400 Carya illinoinensis HOM05D001972 ORTHO05D002555 3.3e-06 55.8 80 46.2
TPR.G35905 Trifolium pratense HOM05D001972 ORTHO05D002555 3.3e-06 55.8 107 39.3
TAR371G0570 Trochodendron aralioides HOM05D001972 ORTHO05D002555 3.3e-06 55.8 51 56.9
CAN.G43.7 Capsicum annuum HOM05D001972 ORTHO05D002555 4.3e-06 55.5 78 44.9
Actinidia22116 Actinidia chinensis HOM05D001972 ORTHO05D002555 5.6e-06 55.1 86 47.7
Aqoxy1G02842 Aquilegia oxysepala HOM05D001972 ORTHO05D002555 5.6e-06 55.1 43 60.5
CsaV3_5G012330 Cucumis sativus L. HOM05D001972 ORTHO05D002555 5.6e-06 55.1 43 58.1
Hund10034 Selenicereus undatus HOM05D001972 ORTHO05D002555 5.6e-06 55.1 43 60.5
ECA246G1510 Erigeron canadensis HOM05D001972 ORTHO05D002555 7.3e-06 54.7 47 57.4
Eucgr.B03561 Eucalyptus grandis HOM05D001972 ORTHO05D002555 9.6e-06 54.3 43 58.1
PGR102G3008 Punica granatum HOM05D001972 ORTHO05D002555 9.6e-06 54.3 113 35.4
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 9.6e-06 54.3 44 54.5


User provided reference genes

Program Settings