Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G262100 Glycine max HOM05D004784 ORTHO05D005762 7.9e-241 836.6 408 100.0
Glyma.17G012000 Glycine max HOM05D004784 ORTHO05D005762 1.8e-237 825.5 408 98.0
Phvul.003G080400 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 4.2e-234 814.3 408 96.6
VMungo1215G1817 Vigna mungo HOM05D004784 ORTHO05D005762 6.7e-232 807.0 408 95.6
Ca_21072_v3 Cicer arietinum L. HOM05D004784 ORTHO05D005762 2.0e-228 795.4 408 93.9
Lalb_Chr18g0056491 Lupinus albus HOM05D004784 ORTHO05D005762 2.2e-227 792.0 406 93.6
TPR.G37066 Trifolium pratense HOM05D004784 ORTHO05D005762 2.9e-227 791.6 408 93.1
Medtr4g132360 Medicago truncatula HOM05D004784 ORTHO05D005762 1.1e-226 789.6 408 93.1
arahy.Tifrunner.gnm1.ann1.EH8QHL Arachis hypogaea HOM05D004784 ORTHO05D005762 4.2e-226 787.7 408 93.4
Glyma.09G004700 Glycine max HOM05D004784 ORTHO05D005762 3.6e-225 784.6 408 92.9
Psat4g005920 Pisum sativum HOM05D004784 ORTHO05D005762 3.6e-225 784.6 409 92.7
Glyma.15G109300 Glycine max HOM05D004784 ORTHO05D005762 1.5e-223 779.2 408 92.2
Lj6g0010262 Lotus japonicus HOM05D004784 ORTHO05D005762 2.6e-223 778.5 408 91.9
Lalb_Chr15g0087671 Lupinus albus HOM05D004784 ORTHO05D005762 2.6e-223 778.5 406 92.4
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 9.7e-223 776.5 408 91.9
Manes.17G025900 Manihot esculenta HOM05D004784 ORTHO05D005762 2.8e-222 775.0 408 91.4
Gohir.A05G171500 Gossypium hirsutum HOM05D004784 ORTHO05D005762 1.6e-220 769.2 408 90.7
Gohir.D05G174600 Gossypium hirsutum HOM05D004784 ORTHO05D005762 2.0e-220 768.8 408 90.9
Thecc.06G223500 Theobroma cacao HOM05D004784 ORTHO05D005762 2.0e-220 768.8 408 90.9
MELO3C002444.2 Cucumis melo HOM05D004784 ORTHO05D005762 2.6e-220 768.5 408 90.0
arahy.Tifrunner.gnm1.ann1.PLZ2LX Arachis hypogaea HOM05D004784 ORTHO05D005762 3.5e-220 768.1 398 93.2
TWI38G1114 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 3.5e-220 768.1 406 90.6
COL.COLO4_31797 Corchorus olitorius HOM05D004784 ORTHO05D005762 4.5e-220 767.7 408 90.7
CiPaw.09G093700 Carya illinoinensis HOM05D004784 ORTHO05D005762 5.9e-220 767.3 406 90.1
Gorai.010G181500 Gossypium raimondii HOM05D004784 ORTHO05D005762 7.7e-220 766.9 408 90.7
Nitab4.5_0002695g0040 Nicotiana tabacum HOM05D004784 ORTHO05D005762 7.7e-220 766.9 406 89.7
Sed0006727 Sechium edule HOM05D004784 ORTHO05D005762 7.7e-220 766.9 408 90.0
Nitab4.5_0007963g0010 Nicotiana tabacum HOM05D004784 ORTHO05D005762 1.3e-219 766.1 406 89.4
Gohir.A06G149200 Gossypium hirsutum HOM05D004784 ORTHO05D005762 1.7e-219 765.8 408 90.4
Prupe.4G018500 Prunus persica HOM05D004784 ORTHO05D005762 2.9e-219 765.0 409 90.2
CsaV3_1G010620 Cucumis sativus L. HOM05D004784 ORTHO05D005762 6.5e-219 763.8 408 89.7
Duzib192G0808 Durio zibethinus HOM05D004784 ORTHO05D005762 6.5e-219 763.8 408 89.7
Gohir.D06G155300 Gossypium hirsutum HOM05D004784 ORTHO05D005762 6.5e-219 763.8 408 90.2
QL02p099920 Quercus lobata HOM05D004784 ORTHO05D005762 1.1e-218 763.1 408 89.7
TWI63G0560 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 1.1e-218 763.1 406 89.7
Peaxi162Scf00131g01117 Petunia axillaris HOM05D004784 ORTHO05D005762 1.5e-218 762.7 407 88.5
ClCG03G004610 Citrullus lanatus HOM05D004784 ORTHO05D005762 3.2e-218 761.5 408 89.2
Sed0013135 Sechium edule HOM05D004784 ORTHO05D005762 4.2e-218 761.1 408 89.2
Solyc02g080810.3 Solanum lycopersicum HOM05D004784 ORTHO05D005762 4.2e-218 761.1 406 88.2
QL05p072692 Quercus lobata HOM05D004784 ORTHO05D005762 7.2e-218 760.4 407 89.2
PGSC0003DMG400016444 Solanum tuberosum HOM05D004784 ORTHO05D005762 1.2e-217 759.6 406 88.2
Dinv13913 Davidia involucrata HOM05D004784 ORTHO05D005762 2.7e-217 758.4 406 89.2
Sopen02g025500 Solanum pennellii HOM05D004784 ORTHO05D005762 3.6e-217 758.1 406 87.9
Hma1.2p1_0091F.1_g046500 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 4.7e-217 757.7 406 87.9
Dinv20065 Davidia involucrata HOM05D004784 ORTHO05D005762 6.1e-217 757.3 406 89.4
SalBow8G0639 Salvia bowleyana HOM05D004784 ORTHO05D005762 1.0e-216 756.5 406 88.7
Cfa000202 Carpinus fangiana HOM05D004784 ORTHO05D005762 1.4e-216 756.1 406 88.9
Cc09_g01490 Coffea canephora HOM05D004784 ORTHO05D005762 1.4e-216 756.1 408 88.2
Hma1.2p1_0298F.1_g117720 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 1.8e-216 755.7 405 89.1
MD10G1323700 Malus domestica HOM05D004784 ORTHO05D005762 1.8e-216 755.7 409 89.7
CiPaw.10G073000 Carya illinoinensis HOM05D004784 ORTHO05D005762 2.3e-216 755.4 406 88.9
Haze_06821 Corylus avellana HOM05D004784 ORTHO05D005762 2.3e-216 755.4 406 88.7
RcHm_v2.0_Chr5g0002651 Rosa chinensis HOM05D004784 ORTHO05D005762 2.3e-216 755.4 406 88.7
A09p64310 Brassica napus HOM05D004784 ORTHO05D005762 5.2e-216 754.2 406 88.4
BraA09t41774Z Brassica rapa HOM05D004784 ORTHO05D005762 5.2e-216 754.2 406 88.4
C08p47920 Brassica napus HOM05D004784 ORTHO05D005762 6.7e-216 753.8 406 88.7
Rhsim13G0152700 Rhododendron simsii HOM05D004784 ORTHO05D005762 6.7e-216 753.8 406 88.7
AL1G23030 Arabidopsis lyrata HOM05D004784 ORTHO05D005762 1.2e-215 753.1 406 88.7
Thhalv10007781m.g Eutrema salsugineum HOM05D004784 ORTHO05D005762 1.2e-215 753.1 406 88.9
FvH4_3g01820 Fragaria vesca HOM05D004784 ORTHO05D005762 1.5e-215 752.7 406 88.4
FAN25G0478 Fragaria x ananassa HOM05D004784 ORTHO05D005762 2.6e-215 751.9 406 88.4
Aa31LG1G2870 Aethionema arabicum HOM05D004784 ORTHO05D005762 4.4e-215 751.1 406 88.9
Sp1g10470 Schrenkiella parvula HOM05D004784 ORTHO05D005762 4.4e-215 751.1 406 88.4
Lj1A1232G87 Lonicera japonica HOM05D004784 ORTHO05D005762 5.7e-215 750.7 404 88.1
FAN21G1227 Fragaria x ananassa HOM05D004784 ORTHO05D005762 7.5e-215 750.4 406 88.2
AT1G11860 Arabidopsis thaliana HOM05D004784 ORTHO05D005762 9.7e-215 750.0 406 88.2
THA.LOC104809494 Tarenaya hassleriana HOM05D004784 ORTHO05D005762 9.7e-215 750.0 406 87.7
CAN.G1014.12 Capsicum annuum HOM05D004784 ORTHO05D005762 1.7e-214 749.2 406 87.4
BolC8t52329H Brassica oleracea HOM05D004784 ORTHO05D005762 2.2e-214 748.8 406 87.9
vmacro03682 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 2.2e-214 748.8 422 85.8
Carub.0001s1151 Capsella rubella HOM05D004784 ORTHO05D005762 3.7e-214 748.0 406 88.2
TAR629G2745 Trochodendron aralioides HOM05D004784 ORTHO05D005762 3.7e-214 748.0 406 87.7
Oeu013835.1 Olea europaea HOM05D004784 ORTHO05D005762 6.3e-214 747.3 406 86.2
CARHR012170 Cardamine hirsuta HOM05D004784 ORTHO05D005762 8.2e-214 746.9 406 87.9
Potri.011G006800 Populus trichocarpa HOM05D004784 ORTHO05D005762 2.4e-213 745.3 406 87.7
PGR142G1596 Punica granatum HOM05D004784 ORTHO05D005762 2.4e-213 745.3 408 88.7
Nn1g03473 Nelumbo nucifera HOM05D004784 ORTHO05D005762 7.0e-213 743.8 450 81.8
Oeu002744.1 Olea europaea HOM05D004784 ORTHO05D005762 9.1e-213 743.4 406 86.2
Eucgr.L02773 Eucalyptus grandis HOM05D004784 ORTHO05D005762 1.6e-212 742.7 406 86.9
C08p14960 Brassica napus HOM05D004784 ORTHO05D005762 2.0e-212 742.3 407 87.7
BolC8t49127H Brassica oleracea HOM05D004784 ORTHO05D005762 2.0e-212 742.3 407 87.7
BraA08t35239Z Brassica rapa HOM05D004784 ORTHO05D005762 2.0e-212 742.3 407 88.0
MSTRG.7197 Avicennia marina HOM05D004784 ORTHO05D005762 2.7e-212 741.9 406 86.2
Ciclev10015433m.g Citrus clementina HOM05D004784 ORTHO05D005762 2.7e-212 741.9 407 88.0
Sabra11G0005900 Salix brachista HOM05D004784 ORTHO05D005762 5.9e-212 740.7 406 87.4
Potri.004G009600 Populus trichocarpa HOM05D004784 ORTHO05D005762 7.7e-212 740.3 406 87.2
CANSAT56G2555 Cannabis sativa HOM05D004784 ORTHO05D005762 2.9e-211 738.4 408 86.5
Migut.M01336 Erythranthe guttata HOM05D004784 ORTHO05D005762 3.8e-211 738.0 404 86.4
DCAR_008168 Daucus carota HOM05D004784 ORTHO05D005762 5.0e-211 737.6 421 84.8
unitig_92.g28113 Utricularia gibba HOM05D004784 ORTHO05D005762 8.5e-211 736.9 408 85.5
MBI02_g15378_MAGBIO Magnolia biondii HOM05D004784 ORTHO05D005762 1.5e-210 736.1 407 86.2
PSO541G3045 Papaver somniferum HOM05D004784 ORTHO05D005762 3.2e-210 734.9 407 85.3
PSO675G1799 Papaver somniferum HOM05D004784 ORTHO05D005762 4.2e-210 734.6 407 85.3
MSTRG.14637 Avicennia marina HOM05D004784 ORTHO05D005762 5.5e-210 734.2 409 85.1
Hund23455 Selenicereus undatus HOM05D004784 ORTHO05D005762 7.2e-210 733.8 406 86.2
RhsimUnG0232700 Rhododendron simsii HOM05D004784 ORTHO05D005762 1.2e-209 733.0 449 80.2
Hund21422 Selenicereus undatus HOM05D004784 ORTHO05D005762 2.1e-209 732.3 406 84.7
vmacro22539 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 1.4e-208 729.6 473 76.7
SGA_v2.0_scaffold7G03812 Striga asiatica HOM05D004784 ORTHO05D005762 1.8e-208 729.2 433 82.0
CDE05G1701 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 3.0e-208 728.4 408 85.3
Aqoxy1G03119 Aquilegia oxysepala HOM05D004784 ORTHO05D005762 6.8e-208 727.2 406 84.0
Gorai.009G179900 Gossypium raimondii HOM05D004784 ORTHO05D005762 1.2e-207 726.5 383 91.6
Ah.09g234740 Amaranthus hybridus HOM05D004784 ORTHO05D005762 2.6e-207 725.3 406 85.0
CDE02G4424 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 3.4e-207 724.9 408 85.8
Atru.chr10.2254 Acer truncatum HOM05D004784 ORTHO05D005762 5.7e-207 724.2 406 84.7
Sc24g0000220 Simmondsia chinensis HOM05D004784 ORTHO05D005762 1.4e-205 719.5 407 82.8
AUR62012328 Chenopodium quinoa HOM05D004784 ORTHO05D005762 1.8e-205 719.2 408 82.8
AUR62022970 Chenopodium quinoa HOM05D004784 ORTHO05D005762 2.4e-205 718.8 408 82.8
Nn030s41595 Nelumbo nucifera HOM05D004784 ORTHO05D005762 3.1e-205 718.4 379 91.0
Sc05g0009310 Simmondsia chinensis HOM05D004784 ORTHO05D005762 4.1e-205 718.0 407 82.6
Ah.14g087950 Amaranthus hybridus HOM05D004784 ORTHO05D005762 7.0e-205 717.2 406 83.7
Lsat_1_v5_gn_7_16480 Lactuca sativa HOM05D004784 ORTHO05D005762 2.3e-203 712.2 387 87.9
Oeu040336.3 Olea europaea HOM05D004784 ORTHO05D005762 8.0e-201 703.7 517 69.4
EL10Ac6g15683 Beta vulgaris HOM05D004784 ORTHO05D005762 4.0e-200 701.4 449 75.5
A08p33210 Brassica napus HOM05D004784 ORTHO05D005762 6.8e-200 700.7 407 84.3
Sabra04G0005000 Salix brachista HOM05D004784 ORTHO05D005762 6.8e-200 700.7 382 87.4
HPP92_004130 Vanilla planifolia HOM05D004784 ORTHO05D005762 1.5e-199 699.5 410 81.2
ATR0794G107 Amborella trichopoda HOM05D004784 ORTHO05D005762 1.2e-196 689.9 417 80.1
GSVIVG01012702001 Vitis vinifera HOM05D004784 ORTHO05D005762 2.7e-196 688.7 358 91.6
HanXRQChr15g0470421 Helianthus annuus HOM05D004784 ORTHO05D005762 4.0e-192 674.9 356 89.9
BcaB03g13227 Brassica carinata HOM05D004784 ORTHO05D005762 2.0e-191 672.5 358 89.7
Os04g0623800 Oryza sativa ssp. japonica HOM05D004784 ORTHO05D005762 9.8e-191 670.2 388 81.2
Zm00001eb070250 Zea mays HOM05D004784 ORTHO05D005762 1.7e-187 659.4 379 81.5
SEGI_27497 Sequoiadendron giganteum HOM05D004784 ORTHO05D005762 5.0e-187 657.9 408 75.5
ECA236G1893 Erigeron canadensis HOM05D004784 ORTHO05D005762 1.9e-186 656.0 408 79.2
AagrBONN_evm.TU.Sc2ySwM_344.1952 Anthoceros agrestis HOM05D004784 ORTHO05D005762 6.8e-176 620.9 406 73.4
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 2.0e-175 619.4 412 71.1
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 1.7e-174 616.3 410 71.2
Mapoly0129s0024 Marchantia polymorpha HOM05D004784 ORTHO05D005762 1.2e-169 600.1 405 68.6
TAR627G1106 Trochodendron aralioides HOM05D004784 ORTHO05D005762 1.5e-167 593.2 317 88.3
SMO352G0047 Selaginella moellendorffii HOM05D004784 ORTHO05D005762 1.0e-163 580.5 387 70.5
A06p08340 Brassica napus HOM05D004784 ORTHO05D005762 1.7e-158 563.1 406 70.9
CSS0014504 Camellia sinensis var. sinensis HOM05D004784 ORTHO05D005762 2.2e-158 562.8 387 72.9
TAR626G0807 Trochodendron aralioides HOM05D004784 ORTHO05D005762 1.6e-148 530.0 282 88.3
Actinidia26902 Actinidia chinensis HOM05D004784 ORTHO05D005762 6.2e-145 518.1 310 82.3
Cre03.g193750 Chlamydomonas reinhardtii HOM05D004784 ORTHO05D005762 8.4e-142 507.7 400 61.2
Eucgr.E03909 Eucalyptus grandis HOM05D004784 ORTHO05D005762 8.7e-131 471.1 245 91.4
PRCOL_00007041 Prasinoderma coloniale HOM05D004784 ORTHO05D005762 6.5e-126 454.9 368 60.9
Atru.chr8.533 Acer truncatum HOM05D004784 ORTHO05D005762 1.4e-123 447.2 255 83.5
MCO15G045 Micromonas commoda HOM05D004784 ORTHO05D005762 6.3e-121 438.3 385 57.1
MD05G1348800 Malus domestica HOM05D004784 ORTHO05D005762 3.1e-120 436.0 238 89.1
Lalb_Chr20g0118761 Lupinus albus HOM05D004784 ORTHO05D005762 3.8e-118 429.1 227 90.7
BraA06t24032Z Brassica rapa HOM05D000911 ORTHO05D001266 4.7e-108 395.6 236 80.9
Cpa.g.sc152.29 Carica papaya HOM05D004784 ORTHO05D005762 1.4e-99 367.5 197 87.8
Cfa026602 Carpinus fangiana HOM05D004784 ORTHO05D005762 4.5e-79 299.3 420 40.7
Haze_26660 Corylus avellana HOM05D004784 ORTHO05D005762 5.4e-72 275.8 390 42.3
CBR_g24348 Chara braunii HOM05D004784 ORTHO05D005762 9.2e-72 275.0 183 73.2
Sopen07g011340 Solanum pennellii HOM05D004784 ORTHO05D005762 7.3e-69 265.4 180 71.1
EL10Ac1g01135 Beta vulgaris HOM05D004784 ORTHO05D005762 1.7e-57 227.6 141 75.2
EL10Ac2g03767 Beta vulgaris HOM05D004784 ORTHO05D005762 2.9e-57 226.9 140 75.7
Atru.chr8.531 Acer truncatum HOM05D004784 ORTHO05D005762 1.4e-56 224.6 130 80.8
Actinidia05506 Actinidia chinensis HOM05D004784 ORTHO05D005762 4.9e-49 199.5 104 90.4
Actinidia15969 Actinidia chinensis HOM05D004784 ORTHO05D058202 4.3e-21 106.7 128 48.4
Actinidia11861 Actinidia chinensis HOM05D004784 ORTHO05D005762 2.8e-20 104.0 58 79.3
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 2.0e-10 71.2 335 23.0
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 7.7e-10 69.3 337 22.3


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