Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G156700 Glycine max HOM05D006201 ORTHO05D007178 0.0e+00 1773.4 909 100.0
VMungo1383G1579 Vigna mungo HOM05D006201 ORTHO05D007178 0.0e+00 1407.9 915 81.1
Lj1g0025030 Lotus japonicus HOM05D006201 ORTHO05D007178 0.0e+00 1174.1 913 69.1
Psat3g124360 Pisum sativum HOM05D006201 ORTHO05D007178 0.0e+00 1144.0 916 66.8
TPR.G6637 Trifolium pratense HOM05D006201 ORTHO05D007178 0.0e+00 1137.1 914 67.0
Medtr7g070280 Medicago truncatula HOM05D006201 ORTHO05D007178 0.0e+00 1113.2 911 66.0
Lalb_Chr01g0023361 Lupinus albus HOM05D006201 ORTHO05D007178 8.0e-310 1067.0 937 62.6
arahy.Tifrunner.gnm1.ann1.WUZ318 Arachis hypogaea HOM05D006201 ORTHO05D007178 1.4e-242 843.6 943 52.5
arahy.Tifrunner.gnm1.ann1.0N3F9M Arachis hypogaea HOM05D006201 ORTHO05D007178 2.5e-242 842.8 943 52.4
Cfa017112 Carpinus fangiana HOM05D006201 ORTHO05D007178 4.6e-241 838.6 937 51.9
Haze_21088 Corylus avellana HOM05D006201 ORTHO05D007178 4.1e-237 825.5 966 50.8
QL07p033902 Quercus lobata HOM05D006201 ORTHO05D007178 3.8e-235 818.9 954 50.4
CiPaw.09G215500 Carya illinoinensis HOM05D006201 ORTHO05D007178 2.7e-233 812.8 943 50.1
Ca_07697_v3 Cicer arietinum L. HOM05D006201 ORTHO05D007178 3.9e-224 782.3 719 62.2
Prupe.6G285000 Prunus persica HOM05D006201 ORTHO05D007178 1.9e-218 763.5 948 48.0
MD04G1166800 Malus domestica HOM05D006201 ORTHO05D007178 1.4e-216 757.3 936 47.8
CANSAT35G1627 Cannabis sativa HOM05D006201 ORTHO05D007178 1.5e-215 753.8 941 47.7
FAN05G0393 Fragaria x ananassa HOM05D006201 ORTHO05D007178 1.1e-205 721.1 931 45.9
FAN05G0066 Fragaria x ananassa HOM05D006201 ORTHO05D007178 7.0e-205 718.4 931 45.8
Thecc.05G006600 Theobroma cacao HOM05D006201 ORTHO05D007178 1.7e-203 713.8 938 45.1
Phvul.008G092200 Phaseolus vulgaris HOM05D006201 ORTHO05D007178 1.5e-202 710.7 472 80.7
Manes.09G111900 Manihot esculenta HOM05D006201 ORTHO05D007178 5.5e-202 708.8 939 45.4
TWI77G1003 Tripterygium wilfordii HOM05D006201 ORTHO05D007178 3.6e-201 706.1 940 45.7
ClCG03G002510 Citrullus lanatus HOM05D006201 ORTHO05D007178 8.0e-201 704.9 828 48.3
Gorai.012G119200 Gossypium raimondii HOM05D006201 ORTHO05D007178 4.1e-197 692.6 953 44.2
Gohir.A04G095500 Gossypium hirsutum HOM05D006201 ORTHO05D007178 5.4e-197 692.2 939 44.6
Duzib093G1324 Durio zibethinus HOM05D006201 ORTHO05D007178 2.0e-196 690.3 943 44.1
Ciclev10024812m.g Citrus clementina HOM05D006201 ORTHO05D007178 8.9e-192 674.9 949 44.7
Actinidia11549 Actinidia chinensis HOM05D006201 ORTHO05D007178 2.6e-191 673.3 937 44.9
FAN14G5119 Fragaria x ananassa HOM05D006201 ORTHO05D007178 4.4e-191 672.5 975 42.8
Sed0013207 Sechium edule HOM05D006201 ORTHO05D007178 4.4e-191 672.5 820 46.5
Sabra16G0130900 Salix brachista HOM05D006201 ORTHO05D007178 4.6e-188 662.5 943 43.5
Cpa.g.sc861.1 Carica papaya HOM05D006201 ORTHO05D007178 7.8e-188 661.8 945 42.9
CsaV3_1G013180 Cucumis sativus L. HOM05D006201 ORTHO05D007178 2.3e-187 660.2 837 44.7
vmacro20327 Vaccinium macrocarpon HOM05D006201 ORTHO05D007178 3.0e-187 659.8 952 43.9
Rhsim05G0225800 Rhododendron simsii HOM05D006201 ORTHO05D007178 2.8e-185 653.3 941 43.7
FAN02G1356 Fragaria x ananassa HOM05D006201 ORTHO05D007178 1.4e-184 651.0 931 43.1
Lj2C67G1 Lonicera japonica HOM05D006201 ORTHO05D007178 3.5e-180 636.3 909 44.3
MELO3C004988.2 Cucumis melo HOM05D006201 ORTHO05D007178 1.7e-174 617.5 839 43.9
Oeu020418.1 Olea europaea HOM05D006201 ORTHO05D007178 4.3e-170 602.8 896 42.1
MSTRG.5539 Avicennia marina HOM05D006201 ORTHO05D007178 1.2e-167 594.7 926 40.8
PGR004G1794 Punica granatum HOM05D006201 ORTHO05D007178 4.9e-166 589.3 926 41.8
Nitab4.5_0006173g0010 Nicotiana tabacum HOM05D006201 ORTHO05D007178 6.4e-166 589.0 911 41.2
HanXRQChr12g0375461 Helianthus annuus HOM05D006201 ORTHO05D007178 6.6e-163 578.9 921 39.3
PSO349G0155 Papaver somniferum HOM05D006201 ORTHO05D007178 6.6e-163 578.9 949 38.9
Nitab4.5_0003493g0040 Nicotiana tabacum HOM05D006201 ORTHO05D007178 3.3e-162 576.6 931 39.7
Aqoxy1G01280 Aquilegia oxysepala HOM05D006201 ORTHO05D007178 7.3e-162 575.5 936 39.5
Cc06_g00730 Coffea canephora HOM05D006201 ORTHO05D007178 6.2e-161 572.4 903 39.4
PSO017G2042 Papaver somniferum HOM05D006201 ORTHO05D007178 8.1e-161 572.0 933 38.9
Lsat_1_v5_gn_5_149661 Lactuca sativa HOM05D006201 ORTHO05D007178 1.4e-160 571.2 953 38.8
DCAR_023994 Daucus carota HOM05D006201 ORTHO05D007178 2.6e-159 567.0 927 38.8
EL10Ac5g12480 Beta vulgaris HOM05D006201 ORTHO05D007178 3.4e-159 566.6 928 38.9
Sc22g0002850 Simmondsia chinensis HOM05D006201 ORTHO05D007178 2.9e-158 563.5 904 39.4
FvH4_6g10600 Fragaria vesca HOM05D006201 ORTHO05D007178 1.6e-156 557.8 701 45.9
PGSC0003DMG400026051 Solanum tuberosum HOM05D006201 ORTHO05D007178 2.7e-156 557.0 936 39.0
COL.COLO4_14449 Corchorus olitorius HOM05D006201 ORTHO05D007178 6.0e-156 555.8 818 42.1
Migut.J00094 Erythranthe guttata HOM05D006201 ORTHO05D007178 1.3e-155 554.7 914 39.4
Sopen01g036050 Solanum pennellii HOM05D006201 ORTHO05D007178 5.1e-155 552.7 938 38.9
Gohir.D04G135400 Gossypium hirsutum HOM05D006201 ORTHO05D007178 5.6e-154 549.3 726 44.6
MBI09_g02137_MAGBIO Magnolia biondii HOM05D006201 ORTHO05D007178 9.6e-154 548.5 946 38.5
RcHm_v2.0_Chr3g0461591 Rosa chinensis HOM05D006201 ORTHO05D007178 9.6e-154 548.5 673 46.5
THA.LOC104823304 Tarenaya hassleriana HOM05D006201 ORTHO05D007178 8.4e-150 535.4 928 37.5
AUR62036404 Chenopodium quinoa HOM05D006201 ORTHO05D007178 3.0e-147 526.9 921 38.0
Ah.12g059100 Amaranthus hybridus HOM05D006201 ORTHO05D007178 5.6e-146 522.7 935 36.4
Aa31LG5G18800 Aethionema arabicum HOM05D006201 ORTHO05D007178 4.8e-145 519.6 957 37.1
BraA05t22910Z Brassica rapa HOM05D006201 ORTHO05D007178 3.4e-143 513.5 924 38.6
CARHR083120 Cardamine hirsuta HOM05D006201 ORTHO05D007178 9.9e-143 511.9 947 37.0
AL3G19800 Arabidopsis lyrata HOM05D006201 ORTHO05D007178 8.4e-142 508.8 949 36.9
SGA_v2.0_scaffold85G26680 Striga asiatica HOM05D006201 ORTHO05D007178 1.1e-141 508.4 931 39.0
Carub.0003s0793 Capsella rubella HOM05D006201 ORTHO05D007178 1.9e-141 507.7 955 37.0
A05p40010 Brassica napus HOM05D006201 ORTHO05D007178 3.2e-141 506.9 924 38.5
Sp3g07220 Schrenkiella parvula HOM05D006201 ORTHO05D007178 3.9e-139 500.0 949 36.6
Thhalv10022535m.g Eutrema salsugineum HOM05D006201 ORTHO05D007178 5.1e-139 499.6 947 37.1
GSVIVG01030267001 Vitis vinifera HOM05D006201 ORTHO05D007178 8.7e-139 498.8 681 46.5
C05p59050 Brassica napus HOM05D006201 ORTHO05D007178 2.8e-137 493.8 928 37.8
BolC5t34557H Brassica oleracea HOM05D006201 ORTHO05D007178 2.8e-137 493.8 928 37.7
AUR62030757 Chenopodium quinoa HOM05D006201 ORTHO05D007178 1.6e-132 478.0 814 37.8
BcaC05g29618 Brassica carinata HOM05D006201 ORTHO05D007178 1.9e-130 471.1 914 36.4
Eucgr.K02944 Eucalyptus grandis HOM05D006201 ORTHO05D007178 4.1e-128 463.4 677 42.1
Dinv12171 Davidia involucrata HOM05D006201 ORTHO05D007178 1.2e-127 461.8 557 47.8
CSS0012693 Camellia sinensis var. sinensis HOM05D006201 ORTHO05D007178 5.0e-126 456.4 704 42.5
Solyc01g090260.5.1 Solanum lycopersicum HOM05D006201 ORTHO05D007178 7.4e-122 442.6 699 39.2
CAN.G1473.10 Capsicum annuum HOM05D006201 ORTHO05D007178 3.2e-117 427.2 628 41.4
TAR623G1020 Trochodendron aralioides HOM05D006201 ORTHO05D007178 2.1e-116 424.5 565 45.5
AUR62044474 Chenopodium quinoa HOM05D006201 ORTHO05D007178 6.1e-116 422.9 815 36.1
Nn4g22431 Nelumbo nucifera HOM05D006201 ORTHO05D007178 1.5e-109 401.7 626 40.9
ECA248G2923 Erigeron canadensis HOM05D006201 ORTHO05D007178 1.9e-109 401.4 1158 28.5
unitig_578.g15909 Utricularia gibba HOM05D006201 ORTHO05D007178 1.3e-97 362.1 948 32.0
Atru.chr8.2337 Acer truncatum HOM05D006201 ORTHO05D007178 2.2e-97 361.3 492 46.1
AT3G08800 Arabidopsis thaliana HOM05D006201 ORTHO05D007178 8.3e-97 359.4 637 38.0
Potri.016G127500 Populus trichocarpa HOM05D006201 ORTHO05D007178 3.7e-89 334.0 503 40.8
Zm00001eb012870 Zea mays HOM05D006201 ORTHO05D007178 5.4e-88 330.1 782 32.9
HPP92_025099 Vanilla planifolia HOM05D006201 ORTHO05D007178 9.1e-88 329.3 710 32.3
Hma1.2p1_0479F.1_g161690 Hydrangea macrophylla HOM05D006201 ORTHO05D007178 2.9e-78 297.7 347 47.0
ClCG10G022450 Citrullus lanatus HOM05D006201 ORTHO05D007178 1.2e-76 292.4 602 35.2
CDE04G1687 Ceratophyllum demersum HOM05D006201 ORTHO05D007178 1.2e-74 285.8 933 27.9
Rhsim05G0226000 Rhododendron simsii HOM05D006201 ORTHO05D007178 2.6e-74 284.6 497 37.8
Hund14937 Selenicereus undatus HOM05D006201 ORTHO05D007178 4.3e-69 267.3 375 43.2
Hund14942 Selenicereus undatus HOM05D006201 ORTHO05D007178 1.6e-68 265.4 472 35.6
Dinv12170 Davidia involucrata HOM05D006201 ORTHO05D007178 1.8e-67 261.9 366 46.4
Mapoly0011s0138 Marchantia polymorpha HOM05D006201 ORTHO05D007178 1.1e-64 252.7 841 27.8
TAR623G1438 Trochodendron aralioides HOM05D006201 ORTHO05D007178 1.1e-56 226.1 269 50.2
ATR0605G352 Amborella trichopoda HOM05D006201 ORTHO05D007178 3.2e-56 224.6 380 39.2
Peaxi162Scf00028g00419 Petunia axillaris HOM05D006201 ORTHO05D007178 5.6e-53 213.8 403 38.0
Pp3c1_35690 Physcomitrium patens HOM05D006201 ORTHO05D007178 1.6e-47 195.7 370 33.2
AagrBONN_evm.TU.Sc2ySwM_344.1123 Anthoceros agrestis HOM05D006201 ORTHO05D007178 1.2e-42 179.5 363 33.1
ATR0605G310 Amborella trichopoda HOM05D006201 ORTHO05D007178 2.7e-39 168.3 345 33.6
SEGI_17367 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 1.5e-37 162.5 218 42.2
RcHm_v2.0_Chr3g0461601 Rosa chinensis HOM05D006201 ORTHO05D007178 6.2e-36 157.1 230 43.0
SEGI_30477 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 9.3e-32 143.3 368 28.3
Peaxi162Scf00028g00413 Petunia axillaris HOM05D006201 ORTHO05D007178 3.5e-31 141.4 380 31.8
CANSAT64G1736 Cannabis sativa HOM05D006201 ORTHO05D007178 5.1e-30 137.5 121 60.3
CAN.G1473.9 Capsicum annuum HOM05D006201 ORTHO05D007178 1.5e-18 99.4 208 38.9
Nn2g13629 Nelumbo nucifera HOM05D001630 ORTHO05D007178 5.5e-16 90.9 246 30.1
SMO351G0194 Selaginella moellendorffii HOM05D006201 ORTHO05D007178 5.5e-16 90.9 351 24.5
CBR_g8780 Chara braunii HOM05D006201 ORTHO05D007178 2.5e-13 82.0 308 25.6
SEGI_33665 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 2.1e-07 62.4 145 31.7
Rhsim05G0225900 Rhododendron simsii HOM05D006201 ORTHO05D007178 1.4e-06 59.7 102 40.2


User provided reference genes

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