Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 4.5e-233 810.8 394 100.0
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 3.6e-206 721.5 367 95.1
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 2.3e-205 718.8 369 94.3
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 1.5e-199 699.5 366 91.5
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 1.5e-199 699.5 366 91.5
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 1.4e-197 693.0 369 89.4
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 2.4e-194 682.2 369 88.1
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 5.4e-194 681.0 373 87.1
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 7.8e-193 677.2 376 87.0
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 1.6e-190 669.5 364 86.0
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 5.2e-189 664.5 368 85.3
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 1.2e-188 663.3 368 85.9
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.5e-188 662.9 365 86.3
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 2.0e-188 662.5 359 86.9
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 4.4e-188 661.4 360 85.8
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 2.2e-187 659.1 371 86.3
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 2.9e-187 658.7 358 86.9
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 2.9e-187 658.7 356 87.1
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 3.7e-187 658.3 370 84.6
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 3.7e-187 658.3 356 87.4
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 3.7e-187 658.3 363 87.1
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 3.7e-187 658.3 358 86.3
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 4.9e-187 657.9 353 88.1
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 1.1e-186 656.8 362 85.9
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 1.1e-186 656.8 364 84.9
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.8e-186 656.0 356 87.1
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.8e-186 656.0 358 86.6
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 2.0e-185 652.5 358 86.0
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 3.5e-185 651.7 363 86.5
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 4.6e-185 651.4 358 84.9
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 5.9e-185 651.0 357 86.6
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 1.0e-184 650.2 367 83.9
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 1.7e-184 649.4 356 86.0
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 2.3e-184 649.0 357 85.2
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.3e-184 649.0 356 84.3
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 2.3e-184 649.0 375 82.1
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 3.0e-184 648.7 356 84.6
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 3.0e-184 648.7 358 84.4
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 3.9e-184 648.3 363 84.8
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 3.9e-184 648.3 357 84.6
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 3.9e-184 648.3 365 85.5
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 3.9e-184 648.3 357 86.8
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 5.0e-184 647.9 365 85.8
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 6.6e-184 647.5 357 85.2
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 8.6e-184 647.1 356 84.3
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 1.1e-183 646.7 364 86.5
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.9e-183 646.0 358 84.4
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.9e-183 646.0 360 83.6
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 2.5e-183 645.6 358 84.1
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 5.6e-183 644.4 358 86.3
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 7.3e-183 644.0 358 84.4
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 9.5e-183 643.7 356 85.4
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 9.5e-183 643.7 358 83.8
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 1.2e-182 643.3 357 83.5
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 1.6e-182 642.9 379 81.3
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 2.8e-182 642.1 367 82.8
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 4.7e-182 641.3 354 84.5
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 8.0e-182 640.6 353 84.1
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 1.4e-181 639.8 356 83.4
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 1.8e-181 639.4 372 81.7
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.8e-181 639.4 366 84.4
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 6.8e-181 637.5 354 84.7
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 8.9e-181 637.1 356 81.7
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 2.6e-180 635.6 358 83.0
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 3.4e-180 635.2 367 81.5
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 4.4e-180 634.8 357 82.9
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 4.4e-180 634.8 358 83.0
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 4.9e-179 631.3 353 83.0
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 6.4e-179 630.9 357 82.6
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 1.1e-178 630.2 362 82.6
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 3.2e-178 628.6 366 80.9
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 3.2e-178 628.6 363 81.0
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 3.2e-178 628.6 357 82.1
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 4.1e-178 628.2 374 79.9
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 9.2e-178 627.1 357 82.6
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 9.2e-178 627.1 354 83.1
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 1.2e-177 626.7 357 82.1
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 2.7e-177 625.5 374 79.9
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 7.8e-177 624.0 358 82.1
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 1.0e-176 623.6 366 80.9
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 1.3e-176 623.2 350 83.4
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 3.0e-176 622.1 367 79.8
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 5.0e-176 621.3 358 81.0
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 8.1e-174 614.0 364 80.5
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 8.1e-174 614.0 367 79.6
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 8.1e-174 614.0 364 79.4
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 1.8e-173 612.8 366 79.0
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 1.8e-173 612.8 378 75.9
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 4.0e-173 611.7 384 77.9
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 3.4e-172 608.6 368 78.8
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 5.8e-172 607.8 375 77.9
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 7.5e-172 607.4 364 79.1
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.2e-171 605.9 370 78.4
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 2.2e-171 605.9 363 77.4
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 2.2e-171 605.9 383 76.0
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 1.9e-170 602.8 341 82.4
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 5.4e-170 601.3 352 81.5
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 1.7e-168 596.3 365 78.4
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.1e-167 593.6 369 77.0
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.5e-167 593.2 362 76.8
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 3.3e-167 592.0 358 78.2
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 4.3e-167 591.7 379 76.0
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 7.3e-167 590.9 362 76.8
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 1.1e-165 587.0 355 76.3
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.8e-165 586.3 363 76.9
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 6.8e-165 584.3 358 79.6
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 2.2e-163 579.3 356 75.6
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 8.4e-163 577.4 347 79.3
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 2.1e-161 572.8 358 76.8
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 4.6e-161 571.6 365 75.3
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 3.9e-160 568.5 359 75.2
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.1e-159 567.0 356 77.0
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 4.7e-158 561.6 358 75.4
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 4.0e-157 558.5 363 72.7
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 2.6e-156 555.8 357 72.0
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 2.9e-155 552.4 349 73.1
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.1e-154 550.4 358 74.0
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 1.9e-154 549.7 353 71.7
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.4e-154 549.3 358 73.5
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 5.4e-154 548.1 295 86.8
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 2.1e-153 546.2 363 73.6
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 2.7e-153 545.8 443 64.1
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 1.0e-152 543.9 374 70.3
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 6.6e-152 541.2 332 73.8
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.2e-148 530.4 365 72.1
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 5.8e-148 528.1 356 72.8
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 3.2e-146 522.3 279 87.8
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 6.7e-144 514.6 395 63.0
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.2e-137 493.8 291 79.4
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 9.6e-135 484.2 364 66.8
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 1.3e-134 483.8 351 63.8
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 6.9e-133 478.0 335 65.7
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 4.9e-131 471.9 239 92.1
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 8.7e-128 461.1 335 62.4
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 8.7e-128 461.1 723 39.8
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 9.7e-127 457.6 316 66.8
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 7.7e-116 421.4 262 75.2
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 3.7e-110 402.5 239 77.8
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 4.1e-109 399.1 348 54.3
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 2.2e-102 376.7 339 57.8
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 7.2e-98 361.7 216 78.2
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 3.0e-96 356.3 278 61.2
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.0e-95 353.6 332 54.5
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 6.3e-86 322.0 202 75.7
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 7.7e-84 315.1 291 58.4
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 4.3e-50 203.0 142 70.4
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 5.8e-47 192.6 100 92.0
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 3.8e-46 189.9 125 76.0
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 3.8e-46 189.9 125 76.0
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 6.4e-46 189.1 117 82.1
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 8.4e-46 188.7 125 75.2
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.0e-43 181.8 113 74.3
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.3e-43 180.6 171 52.6
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 8.7e-43 178.7 124 71.8
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.1e-41 174.1 97 87.6
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 1.2e-39 168.3 127 64.6
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.4e-37 161.4 98 75.5
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 6.2e-33 146.0 123 61.0
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 2.4e-32 144.1 123 60.2
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 2.8e-25 120.6 69 82.6
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 4.0e-24 116.7 65 86.2
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.2e-23 115.2 64 82.8
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 9.9e-23 112.1 71 74.6
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 5.5e-21 106.3 61 82.0
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 7.1e-21 105.9 72 69.4
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 9.0e-16 89.0 84 54.8
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.5e-15 88.2 128 44.5
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.9e-13 81.3 49 71.4
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 1.2e-12 78.6 62 59.7
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 1.8e-08 64.7 41 75.6
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 3.4e-07 60.5 31 93.5


User provided reference genes

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