Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 5.3e-87 324.3 163 100.0
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 1.0e-82 310.1 163 96.3
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 6.5e-77 290.8 163 89.0
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 3.4e-62 241.9 161 74.5
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 3.2e-60 235.3 165 72.7
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 7.2e-60 234.2 166 72.3
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 1.6e-59 233.0 166 72.3
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 8.8e-58 227.3 166 69.3
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 5.9e-54 214.5 153 70.6
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 8.5e-53 210.7 198 59.1
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 2.5e-52 209.1 163 67.5
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.2e-51 206.8 166 66.9
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 1.2e-51 206.8 169 66.9
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 1.2e-51 206.8 132 76.5
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 2.7e-51 205.7 162 64.2
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 6.1e-51 204.5 136 72.8
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 6.1e-51 204.5 112 88.4
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 1.4e-50 203.4 161 62.7
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 1.8e-50 203.0 164 66.5
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 1.8e-50 203.0 159 66.7
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 2.3e-50 202.6 158 66.5
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 2.3e-50 202.6 160 66.2
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 3.0e-50 202.2 129 77.5
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 3.9e-50 201.8 165 63.0
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 6.7e-50 201.1 129 76.7
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 8.8e-50 200.7 185 60.5
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 1.1e-49 200.3 174 63.2
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 1.5e-49 199.9 161 65.2
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 5.7e-49 198.0 133 72.9
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 2.8e-48 195.7 167 62.3
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 3.7e-48 195.3 135 70.4
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 4.8e-48 194.9 123 75.6
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 8.2e-48 194.1 165 63.0
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.4e-47 192.6 168 58.9
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 2.4e-47 192.6 163 63.2
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 2.4e-47 192.6 159 62.3
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 3.1e-47 192.2 168 61.3
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 9.1e-47 190.7 119 79.8
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 1.2e-46 190.3 158 60.8
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 2.0e-46 189.5 165 59.4
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 2.6e-46 189.1 152 66.4
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 3.5e-46 188.7 161 63.4
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 5.9e-46 188.0 153 61.4
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 5.9e-46 188.0 161 62.1
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 1.0e-45 187.2 165 64.8
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 1.3e-45 186.8 161 62.1
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 1.7e-45 186.4 165 64.8
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 1.7e-45 186.4 161 62.7
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 2.2e-45 186.0 131 73.3
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 2.2e-45 186.0 161 61.5
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 8.5e-45 184.1 165 60.6
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 1.1e-44 183.7 163 62.6
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 1.5e-44 183.3 162 59.3
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 1.9e-44 183.0 165 58.8
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 2.5e-44 182.6 162 59.3
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 3.2e-44 182.2 140 65.7
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 4.2e-44 181.8 164 59.8
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 7.2e-44 181.0 157 60.5
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 7.2e-44 181.0 157 60.5
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 9.4e-44 180.6 150 61.3
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 9.4e-44 180.6 161 59.0
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 2.7e-43 179.1 171 55.6
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 3.6e-43 178.7 162 59.9
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 6.1e-43 177.9 153 58.2
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 1.4e-42 176.8 130 70.0
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.8e-42 176.4 138 66.7
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 5.2e-42 174.9 166 58.4
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 6.8e-42 174.5 163 58.3
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 3.4e-41 172.2 108 81.5
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 5.7e-41 171.4 141 64.5
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 9.7e-41 170.6 163 54.6
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 2.2e-40 169.5 129 69.0
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 4.8e-40 168.3 111 75.7
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.0e-38 162.9 102 76.5
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.0e-38 162.9 102 75.5
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.0e-38 162.9 102 75.5
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 2.7e-38 162.5 157 56.1
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 1.0e-37 160.6 103 72.8
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 1.5e-36 156.8 147 59.9
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.5e-36 156.8 109 71.6
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 1.9e-36 156.4 111 71.2
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 2.5e-36 156.0 109 68.8
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 3.6e-35 152.1 138 61.6
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 6.1e-35 151.4 161 55.9
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.4e-34 150.2 100 75.0
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 6.8e-34 147.9 123 58.5
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 2.0e-33 146.4 162 49.4
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 2.0e-33 146.4 123 58.5
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 5.7e-33 144.8 103 70.9
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 1.3e-32 143.7 153 54.2
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 1.3e-32 143.7 109 67.0
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 2.2e-32 142.9 152 53.9
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 6.3e-32 141.4 109 66.1
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 4.1e-31 138.7 99 73.7
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 2.5e-28 129.4 102 61.8
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 3.3e-28 129.0 128 56.2
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 3.0e-26 122.5 87 65.5
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 7.8e-14 81.3 80 53.8
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 4.7e-11 72.0 68 58.8
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.1e-10 70.9 100 49.0
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 1.4e-07 60.5 104 32.7
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 2.4e-07 59.7 90 32.2
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 3.5e-06 55.8 42 61.9
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 3.5e-06 55.8 42 61.9


User provided reference genes

Program Settings