Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 1.1e-306 1055.8 519 100.0
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 8.5e-264 913.3 552 83.7
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 8.2e-243 843.6 504 83.1
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 1.0e-240 836.6 558 77.2
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 1.8e-237 825.9 546 75.6
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 2.4e-234 815.5 552 74.3
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 6.5e-232 807.4 561 73.6
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 5.6e-223 777.7 560 72.7
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 1.8e-221 772.7 462 81.6
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 3.2e-218 761.9 468 79.9
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 3.2e-218 761.9 464 80.4
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 2.3e-216 755.7 501 75.2
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 1.2e-214 750.0 546 70.9
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 1.2e-214 750.0 462 77.3
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 1.4e-213 746.5 543 69.6
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 5.2e-213 744.6 461 78.7
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.5e-212 743.0 555 69.0
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 4.9e-211 738.0 468 76.3
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 3.2e-210 735.3 545 69.2
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 4.6e-209 731.5 494 73.9
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 4.6e-209 731.5 561 67.7
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 1.0e-208 730.3 579 66.7
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.7e-208 729.6 545 68.8
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 1.1e-207 726.9 497 74.2
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.1e-207 726.9 562 66.0
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 2.5e-207 725.7 462 76.0
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 1.6e-206 723.0 543 68.3
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 2.1e-206 722.6 548 69.0
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 2.8e-206 722.2 552 66.7
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 2.8e-206 722.2 464 75.6
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 6.2e-206 721.1 635 61.6
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.1e-205 720.3 548 69.0
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 1.4e-205 719.9 548 69.3
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 1.4e-205 719.9 525 70.1
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 2.3e-205 719.2 462 76.2
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 4.0e-205 718.4 555 67.9
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 4.0e-205 718.4 462 76.2
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 5.2e-205 718.0 541 66.9
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 7.5e-204 714.1 542 66.8
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 9.8e-204 713.8 476 74.4
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 2.9e-203 712.2 462 74.7
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.9e-203 712.2 462 74.7
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 4.9e-203 711.4 462 74.5
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 8.3e-203 710.7 511 69.9
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 3.2e-202 708.8 457 74.8
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 5.4e-202 708.0 462 73.8
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 9.2e-202 707.2 463 73.2
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 2.1e-201 706.1 505 68.5
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 2.7e-201 705.7 553 65.3
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 4.6e-201 704.9 546 66.3
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.0e-200 703.7 509 69.2
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.3e-200 703.4 502 71.1
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 2.3e-200 702.6 553 64.4
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 2.5e-199 699.1 626 60.2
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 3.3e-199 698.7 459 72.8
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 9.5e-199 697.2 545 66.1
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 1.2e-198 696.8 462 71.2
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 2.1e-198 696.0 561 64.7
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 4.7e-198 694.9 539 64.6
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 6.2e-198 694.5 462 71.2
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 1.1e-197 693.7 477 71.5
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 2.3e-197 692.6 422 78.4
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 6.8e-197 691.0 462 70.8
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 1.5e-196 689.9 549 63.0
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 3.4e-196 688.7 505 66.9
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 5.8e-196 688.0 462 72.1
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 7.6e-196 687.6 464 71.1
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 9.9e-196 687.2 477 70.4
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 1.3e-195 686.8 504 67.7
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 1.7e-195 686.4 536 64.2
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 3.7e-195 685.3 462 70.8
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 3.7e-195 685.3 537 65.0
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 3.7e-195 685.3 548 64.2
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 4.9e-195 684.9 424 78.1
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 1.1e-194 683.7 464 70.7
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 5.4e-194 681.4 464 70.9
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 1.2e-193 680.2 484 68.4
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.2e-193 680.2 473 72.3
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 2.1e-193 679.5 482 70.3
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 3.5e-193 678.7 439 74.5
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.3e-192 676.8 545 65.1
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 2.3e-192 676.0 410 77.6
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 3.0e-192 675.6 481 71.9
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 5.1e-192 674.9 410 77.8
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 1.1e-191 673.7 511 65.8
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 3.3e-191 672.2 477 68.6
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 5.6e-191 671.4 410 77.3
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 2.1e-190 669.5 410 77.1
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 2.1e-190 669.5 454 72.7
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 3.6e-190 668.7 410 77.1
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 4.7e-190 668.3 524 63.5
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 4.7e-190 668.3 493 67.1
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 3.1e-189 665.6 468 68.8
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 3.1e-189 665.6 487 68.2
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 2.6e-188 662.5 463 70.0
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 8.7e-184 647.5 665 53.4
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.9e-183 646.4 422 73.0
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.3e-179 633.6 422 72.0
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 3.8e-179 632.1 437 69.3
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 2.1e-177 626.3 461 66.2
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 3.5e-177 625.5 495 65.1
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 3.0e-176 622.5 461 65.7
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 5.6e-175 618.2 459 66.2
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 3.6e-174 615.5 460 66.1
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 4.9e-171 605.1 424 69.6
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.0e-168 597.4 349 80.2
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 7.4e-167 591.3 404 71.3
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 9.6e-167 590.9 429 65.3
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 4.0e-165 585.5 431 65.0
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 1.0e-163 580.9 463 60.9
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 3.8e-163 578.9 498 59.4
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 7.1e-162 574.7 444 62.8
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 1.3e-158 563.9 461 59.9
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 3.7e-158 562.4 461 59.9
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 4.1e-157 558.9 493 57.2
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 4.1e-157 558.9 427 64.2
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 7.6e-156 554.7 431 64.3
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.4e-149 533.1 475 58.5
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 3.1e-149 532.7 424 62.5
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 3.4e-148 529.3 464 60.3
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 1.4e-138 497.3 354 68.6
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 3.9e-136 489.2 371 65.8
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 6.3e-134 481.9 461 54.4
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 1.8e-128 463.8 257 86.8
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 1.6e-121 440.7 269 85.9
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 5.2e-120 435.6 304 71.7
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.6e-116 424.1 317 66.9
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 7.5e-103 378.6 447 49.0
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.3e-102 377.9 262 68.3
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.3e-102 377.9 419 47.5
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 2.0e-100 370.5 327 59.6
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 1.4e-85 321.2 215 68.8
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 4.0e-80 303.1 243 61.3
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 3.0e-75 287.0 235 59.6
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 3.9e-67 260.0 217 65.0
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 1.1e-53 215.3 163 61.3
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 6.2e-49 199.5 175 64.6
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 2.0e-39 167.9 101 78.2
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 2.9e-38 164.1 144 63.2
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 8.5e-38 162.5 158 55.1
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 3.2e-37 160.6 91 75.8
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 8.2e-33 146.0 92 76.1
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 3.8e-22 110.5 113 51.3
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 1.0e-19 102.4 105 55.2
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 8.8e-19 99.4 115 50.4
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 7.2e-13 79.7 58 58.6
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 8.0e-12 76.3 43 86.0
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 8.0e-12 76.3 43 86.0
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 1.0e-11 75.9 58 69.0
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 3.0e-11 74.3 58 67.2
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 2.7e-07 61.2 50 66.0


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