Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G268600 Glycine max HOM05D003823 ORTHO05D004866 2.0e-109 399.1 191 100.0
VMungo0647G1166 Vigna mungo HOM05D003823 ORTHO05D004866 2.6e-109 398.7 191 99.5
Phvul.008G213700 Phaseolus vulgaris HOM05D003823 ORTHO05D004866 3.4e-109 398.3 191 99.0
Glyma.14G048800 Glycine max HOM05D003823 ORTHO05D004866 4.9e-108 394.4 191 99.0
Ca_16285_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 7.0e-107 390.6 191 96.3
FvH4_5g15250 Fragaria vesca HOM05D003823 ORTHO05D004866 1.2e-106 389.8 191 96.3
FAN04G0558 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.2e-106 389.8 191 96.3
FAN08G0194 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.2e-106 389.8 191 96.3
FAN13G2005 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.2e-106 389.8 191 96.3
FAN18G4237 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.2e-106 389.8 191 96.3
Medtr3g080480 Medicago truncatula HOM05D003823 ORTHO05D004866 2.7e-106 388.7 191 96.3
Psat5g111480 Pisum sativum HOM05D003823 ORTHO05D004866 2.7e-106 388.7 191 96.3
MD06G1190100 Malus domestica HOM05D003823 ORTHO05D004866 3.5e-106 388.3 192 96.9
MD14G1197000 Malus domestica HOM05D003823 ORTHO05D004866 3.5e-106 388.3 192 96.9
Prupe.5G189200 Prunus persica HOM05D003823 ORTHO05D004866 3.5e-106 388.3 191 95.8
CANSAT80G0583 Cannabis sativa HOM05D003823 ORTHO05D004866 4.6e-106 387.9 193 95.9
Cfa018968 Carpinus fangiana HOM05D000046 ORTHO05D004866 7.8e-106 387.1 192 96.4
Lalb_Chr25g0280071 Lupinus albus HOM05D003823 ORTHO05D004866 1.0e-105 386.7 189 97.4
Cpa.g.sc388.5 Carica papaya HOM05D003823 ORTHO05D004866 2.3e-105 385.6 191 94.2
Ciclev10022411m.g Citrus clementina HOM05D003823 ORTHO05D004866 3.0e-105 385.2 191 95.3
RcHm_v2.0_Chr7g0180841 Rosa chinensis HOM05D003823 ORTHO05D004866 3.0e-105 385.2 192 95.8
CiPaw.11G041500 Carya illinoinensis HOM05D003823 ORTHO05D004866 3.9e-105 384.8 185 97.8
MBI02_g36598_MAGBIO Magnolia biondii HOM05D003823 ORTHO05D004866 3.9e-105 384.8 191 94.2
Potri.001G354000 Populus trichocarpa HOM05D003823 ORTHO05D004866 6.6e-105 384.0 192 95.3
Cc04_g17180 Coffea canephora HOM05D003823 ORTHO05D004866 1.1e-104 383.3 192 95.3
TPR.G29042 Trifolium pratense HOM05D003823 ORTHO05D004866 1.1e-104 383.3 191 95.3
Hund02662 Selenicereus undatus HOM05D003823 ORTHO05D004866 1.5e-104 382.9 192 93.8
AUR62027457 Chenopodium quinoa HOM05D003823 ORTHO05D004866 1.9e-104 382.5 191 93.7
AUR62031242 Chenopodium quinoa HOM05D003823 ORTHO05D004866 1.9e-104 382.5 191 93.7
Nn8g40950 Nelumbo nucifera HOM05D003823 ORTHO05D004866 1.9e-104 382.5 192 94.3
ClCG06G016300 Citrullus lanatus HOM05D003823 ORTHO05D004866 2.5e-104 382.1 186 96.2
MELO3C017163.2 Cucumis melo HOM05D003823 ORTHO05D004866 2.5e-104 382.1 186 96.2
CsaV3_1G002230 Cucumis sativus L. HOM05D003823 ORTHO05D004866 2.5e-104 382.1 186 96.2
Potri.011G077900 Populus trichocarpa HOM05D003823 ORTHO05D004866 2.5e-104 382.1 192 94.3
Gohir.A11G029891 Gossypium hirsutum HOM05D003823 ORTHO05D004866 4.3e-104 381.3 192 95.3
Lj4g0027914 Lotus japonicus HOM05D003823 ORTHO05D004866 4.3e-104 381.3 186 96.8
TPR.G25673 Trifolium pratense HOM05D003823 ORTHO05D004866 4.3e-104 381.3 186 96.2
TWI60G1055 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 7.3e-104 380.6 189 95.2
Nn4g23085 Nelumbo nucifera HOM05D003823 ORTHO05D004866 9.5e-104 380.2 192 93.8
QL10p016165 Quercus lobata HOM05D003823 ORTHO05D004866 9.5e-104 380.2 186 95.7
EL10Ac8g19266 Beta vulgaris HOM05D003823 ORTHO05D004866 1.2e-103 379.8 191 92.7
Manes.14G076100 Manihot esculenta HOM05D003823 ORTHO05D004866 1.2e-103 379.8 192 94.8
Psat2g025840 Pisum sativum HOM05D003823 ORTHO05D004866 1.2e-103 379.8 186 95.7
Sc12g0006240 Simmondsia chinensis HOM05D003823 ORTHO05D004866 1.2e-103 379.8 186 95.7
Ca_06062_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 1.6e-103 379.4 186 96.2
Ca_30714_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 1.6e-103 379.4 186 96.2
PGR083G1126 Punica granatum HOM05D003823 ORTHO05D004866 1.6e-103 379.4 191 94.8
Gohir.D11G033300 Gossypium hirsutum HOM05D003823 ORTHO05D004866 2.1e-103 379.0 192 94.8
Gorai.007G036100 Gossypium raimondii HOM05D003823 ORTHO05D004866 2.1e-103 379.0 192 94.8
TWI81G0804 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 2.1e-103 379.0 188 95.2
Medtr5g085380 Medicago truncatula HOM05D003823 ORTHO05D004866 2.8e-103 378.6 186 95.2
Sed0017565 Sechium edule HOM05D003823 ORTHO05D004866 2.8e-103 378.6 186 95.7
Zm00001eb203950 Zea mays HOM05D003823 ORTHO05D004866 2.8e-103 378.6 187 94.7
Actinidia37644 Actinidia chinensis HOM05D003823 ORTHO05D004866 3.6e-103 378.3 191 93.2
PSO017G2864 Papaver somniferum HOM05D003823 ORTHO05D004866 4.7e-103 377.9 189 94.2
GSVIVG01020043001 Vitis vinifera HOM05D003823 ORTHO05D004866 4.7e-103 377.9 191 92.7
Os02g0265400 Oryza sativa ssp. japonica HOM05D003823 ORTHO05D004866 6.2e-103 377.5 188 93.6
Sabra16G0232900 Salix brachista HOM05D003823 ORTHO05D004866 6.2e-103 377.5 192 93.2
Thecc.03G082400 Theobroma cacao HOM05D003823 ORTHO05D004866 6.2e-103 377.5 192 94.8
Gohir.A12G166100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.0e-102 376.7 191 92.1
Solyc03g113020.3 Solanum lycopersicum HOM05D003823 ORTHO05D004866 1.0e-102 376.7 185 95.7
Sopen03g032100 Solanum pennellii HOM05D003823 ORTHO05D004866 1.0e-102 376.7 185 95.7
Duzib268G0082 Durio zibethinus HOM05D003823 ORTHO05D004866 1.4e-102 376.3 191 91.6
Nitab4.5_0000785g0070 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.4e-102 376.3 188 94.7
Nitab4.5_0010010g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.4e-102 376.3 188 94.7
PSO478G3470 Papaver somniferum HOM05D003823 ORTHO05D004866 1.4e-102 376.3 189 93.7
Peaxi162Scf00009g00217 Petunia axillaris HOM05D003823 ORTHO05D004866 1.4e-102 376.3 187 95.2
PGSC0003DMG400018144 Solanum tuberosum HOM05D003823 ORTHO05D004866 1.8e-102 375.9 185 95.7
ATR0564G299 Amborella trichopoda HOM05D003823 ORTHO05D004866 2.3e-102 375.6 187 94.7
THA.LOC104819434 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 2.3e-102 375.6 191 92.1
CAN.G1305.7 Capsicum annuum HOM05D003823 ORTHO05D004866 3.1e-102 375.2 188 93.6
Cc07_g03190 Coffea canephora HOM05D003823 ORTHO05D004866 3.1e-102 375.2 193 92.2
Duzib251G0021 Durio zibethinus HOM05D003823 ORTHO05D004866 3.1e-102 375.2 191 92.1
Dinv38684 Davidia involucrata HOM05D003823 ORTHO05D004866 4.0e-102 374.8 186 94.1
Aqoxy3G03322 Aquilegia oxysepala HOM05D003823 ORTHO05D004866 5.2e-102 374.4 191 93.7
Duzib084G0821 Durio zibethinus HOM05D003823 ORTHO05D004866 5.2e-102 374.4 191 93.2
Oeu022626.1 Olea europaea HOM05D003823 ORTHO05D004866 5.2e-102 374.4 188 93.1
TAR374G1522 Trochodendron aralioides HOM05D003823 ORTHO05D004866 5.2e-102 374.4 186 94.1
BcaB01g00874 Brassica carinata HOM05D003823 ORTHO05D004866 6.8e-102 374.0 189 93.7
COL.COLO4_22965 Corchorus olitorius HOM05D003823 ORTHO05D004866 6.8e-102 374.0 191 90.1
Eucgr.K02462 Eucalyptus grandis HOM05D003823 ORTHO05D004866 6.8e-102 374.0 211 87.2
SalBow6G5762 Salvia bowleyana HOM05D003823 ORTHO05D004866 8.9e-102 373.6 188 92.6
MSTRG.9636 Avicennia marina HOM05D003823 ORTHO05D004866 1.2e-101 373.2 186 94.1
TAR622G1107 Trochodendron aralioides HOM05D003823 ORTHO05D004866 1.2e-101 373.2 187 93.0
BcaC01g01774 Brassica carinata HOM05D003823 ORTHO05D004866 1.5e-101 372.9 189 93.1
C03p72020 Brassica napus HOM05D003823 ORTHO05D004866 1.5e-101 372.9 189 93.1
BolC3t19499H Brassica oleracea HOM05D003823 ORTHO05D004866 1.5e-101 372.9 189 93.1
Gohir.D12G169500 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.5e-101 372.9 191 92.1
Manes.05G098825 Manihot esculenta HOM05D003823 ORTHO05D004866 1.5e-101 372.9 191 91.1
Actinidia02709 Actinidia chinensis HOM05D003823 ORTHO05D004866 2.0e-101 372.5 193 91.2
Lsat_1_v5_gn_2_88881 Lactuca sativa HOM05D003823 ORTHO05D004866 2.0e-101 372.5 186 93.5
Sp5g14150 Schrenkiella parvula HOM05D003823 ORTHO05D004866 2.6e-101 372.1 189 93.1
A06p19840 Brassica napus HOM05D003823 ORTHO05D004866 3.4e-101 371.7 189 93.1
BraA06t25064Z Brassica rapa HOM05D003823 ORTHO05D004866 3.4e-101 371.7 189 93.1
ECA238G0538 Erigeron canadensis HOM05D003823 ORTHO05D004866 3.4e-101 371.7 186 92.5
HanXRQChr02g0056361 Helianthus annuus HOM05D003823 ORTHO05D004866 3.4e-101 371.7 186 93.0
Thecc.02G351700 Theobroma cacao HOM05D003823 ORTHO05D004866 3.4e-101 371.7 191 90.1
vmacro18202 Vaccinium macrocarpon HOM05D003823 ORTHO05D004866 3.4e-101 371.7 186 93.0
Migut.D02333 Erythranthe guttata HOM05D003823 ORTHO05D004866 4.4e-101 371.3 184 93.5
HanXRQChr14g0449901 Helianthus annuus HOM05D003823 ORTHO05D004866 4.4e-101 371.3 186 93.0
Sed0002791 Sechium edule HOM05D003823 ORTHO05D004866 5.8e-101 370.9 186 93.0
Dinv06526 Davidia involucrata HOM05D003823 ORTHO05D004866 7.5e-101 370.5 186 91.9
Thhalv10010746m.g Eutrema salsugineum HOM05D003823 ORTHO05D004866 7.5e-101 370.5 189 92.6
THA.LOC104821437 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 7.5e-101 370.5 192 91.7
Atru.chr11.1839 Acer truncatum HOM05D003823 ORTHO05D004866 9.8e-101 370.2 191 90.6
Gorai.008G182100 Gossypium raimondii HOM05D003823 ORTHO05D004866 9.8e-101 370.2 191 91.6
A06p27290 Brassica napus HOM05D003823 ORTHO05D004866 1.3e-100 369.8 189 92.6
BraA06t25670Z Brassica rapa HOM05D003823 ORTHO05D004866 1.3e-100 369.8 189 92.6
CSS0031728 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.3e-100 369.8 186 91.9
CSS0041610 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.3e-100 369.8 186 91.9
CSS0049183 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.3e-100 369.8 186 91.9
CARHR156490 Cardamine hirsuta HOM05D003823 ORTHO05D004866 1.7e-100 369.4 189 91.5
Ciclev10032832m.g Citrus clementina HOM05D003823 ORTHO05D004866 1.7e-100 369.4 191 90.6
Rhsim08G0157700 Rhododendron simsii HOM05D003823 ORTHO05D004866 1.7e-100 369.4 191 91.6
HPP92_020326 Vanilla planifolia HOM05D003823 ORTHO05D004866 2.2e-100 369.0 197 90.4
BcaC01g02292 Brassica carinata HOM05D003823 ORTHO05D004866 4.9e-100 367.9 189 92.6
C03p66970 Brassica napus HOM05D003823 ORTHO05D004866 4.9e-100 367.9 189 92.6
BolC3t18970H Brassica oleracea HOM05D003823 ORTHO05D004866 4.9e-100 367.9 189 92.6
DCAR_026066 Daucus carota HOM05D003823 ORTHO05D004866 6.4e-100 367.5 186 93.5
Dinv19933 Davidia involucrata HOM05D003823 ORTHO05D004866 6.4e-100 367.5 192 91.7
Atru.chr4.927 Acer truncatum HOM05D003823 ORTHO05D004866 8.3e-100 367.1 191 90.6
Aa31LG4G16460 Aethionema arabicum HOM05D003823 ORTHO05D004866 8.3e-100 367.1 189 90.5
Migut.D02334 Erythranthe guttata HOM05D003823 ORTHO05D004866 8.3e-100 367.1 186 92.5
Zm00001eb237810 Zea mays HOM05D003823 ORTHO05D004866 3.2e-99 365.2 185 92.4
CDE02G3183 Ceratophyllum demersum HOM05D003823 ORTHO05D004866 4.1e-99 364.8 184 90.8
BcaB02g10689 Brassica carinata HOM05D003823 ORTHO05D004866 1.2e-98 363.2 189 91.0
Rhsim08G0068000 Rhododendron simsii HOM05D003823 ORTHO05D004866 1.6e-98 362.8 198 87.4
AL5G27100 Arabidopsis lyrata HOM05D003823 ORTHO05D004866 1.7e-97 359.4 189 89.4
Oeu006179.1 Olea europaea HOM05D003823 ORTHO05D004866 2.3e-97 359.0 186 90.9
AT3G47810 Arabidopsis thaliana HOM05D003823 ORTHO05D004866 8.6e-97 357.1 188 89.4
Haze_07352 Corylus avellana HOM05D003823 ORTHO05D004866 1.5e-96 356.3 258 71.3
Lj5A113G71 Lonicera japonica HOM05D003823 ORTHO05D004866 3.6e-95 351.7 184 89.1
Carub.0005s1392 Capsella rubella HOM05D003823 ORTHO05D004866 8.1e-95 350.5 181 91.2
Mapoly0081s0078 Marchantia polymorpha HOM05D003823 ORTHO05D004866 1.4e-94 349.7 182 87.4
SMO116G0153 Selaginella moellendorffii HOM05D003823 ORTHO05D004866 1.5e-93 346.3 189 85.2
Pp3c11_12990 Physcomitrium patens HOM05D003823 ORTHO05D004866 2.6e-93 345.5 182 89.0
CSS0031561 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.6e-90 336.3 183 89.1
SGA_v2.0_scaffold193G40709 Striga asiatica HOM05D003823 ORTHO05D004866 6.6e-89 330.9 191 82.2
GSVIVG01008037001 Vitis vinifera HOM05D003823 ORTHO05D004866 1.9e-88 329.3 161 95.0
CBR_g29439 Chara braunii HOM05D003823 ORTHO05D004866 4.3e-88 328.2 183 80.3
Pp3c7_13070 Physcomitrium patens HOM05D003823 ORTHO05D004866 4.3e-88 328.2 182 84.6
CSS0019545 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 2.7e-82 308.9 186 79.6
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 1.9e-80 302.8 152 90.1
QL93p0043_0002 Quercus lobata HOM05D003823 ORTHO05D004866 3.4e-77 292.0 142 96.5
Nitab4.5_0012727g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.4e-75 286.6 142 95.1
MBI05_g00394_MAGBIO Magnolia biondii HOM05D000046 ORTHO05D000195 1.6e-74 283.1 143 89.5
SEGI_34945 Sequoiadendron giganteum HOM05D003823 ORTHO05D004866 6.6e-73 277.7 140 90.7
Actinidia17538 Actinidia chinensis HOM05D003823 ORTHO05D004866 2.6e-69 265.8 130 92.3
Eucgr.G00164 Eucalyptus grandis HOM05D003823 ORTHO05D004866 2.2e-68 262.7 136 90.4
Eucgr.G00114 Eucalyptus grandis HOM05D003823 ORTHO05D004866 4.2e-67 258.5 153 84.3
TAR729G0007 Trochodendron aralioides HOM05D003823 ORTHO05D004866 2.7e-66 255.8 165 76.4
Lj4A511G17 Lonicera japonica HOM05D003823 ORTHO05D004866 3.5e-66 255.4 186 71.5
CSS0004961 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 6.0e-66 254.6 187 69.5
Manes.01G188500 Manihot esculenta HOM05D003823 ORTHO05D004866 1.0e-65 253.8 128 87.5
MCO13G641 Micromonas commoda HOM05D003823 ORTHO05D004866 1.2e-58 230.3 188 54.3
Cre12.g499900 Chlamydomonas reinhardtii HOM05D003823 ORTHO05D004866 2.7e-58 229.2 189 56.1
Lj4A501G12 Lonicera japonica HOM05D003823 ORTHO05D004866 1.8e-54 216.5 166 68.1
Atru.chr9.2289 Acer truncatum HOM05D003823 ORTHO05D004866 7.9e-50 201.1 157 67.5
Gorai.007G237600 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.5e-45 186.8 90 92.2
Gohir.D02G085100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.0e-44 184.1 115 75.7
CSS0033378 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.6e-42 176.8 90 87.8
Gohir.D06G139701 Gossypium hirsutum HOM05D003823 ORTHO05D017994 2.7e-42 176.0 87 89.7
Gohir.A08G078101 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.6e-42 175.6 103 78.6
Gorai.005G191600 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.0e-41 174.1 87 88.5
Gorai.003G098000 Gossypium raimondii HOM05D003823 ORTHO05D017994 1.8e-41 173.3 87 88.5
Gorai.008G100600 Gossypium raimondii HOM05D003823 ORTHO05D004866 6.7e-41 171.4 87 88.5
Gohir.A05G198301 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.1e-40 170.6 87 87.4
Gohir.D03G122233 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.1e-40 170.6 87 87.4
Lj4g0026130 Lotus japonicus HOM05D003823 ORTHO05D004866 7.4e-40 167.9 101 84.2
CSS0038842 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.2e-37 160.6 157 54.8
Gohir.D06G082500 Gossypium hirsutum HOM05D003823 ORTHO05D017994 2.6e-37 159.5 87 85.1
Thecc.02G319100 Theobroma cacao HOM05D003823 ORTHO05D004866 6.5e-36 154.8 100 79.0
Gorai.013G138400 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.6e-34 150.2 79 84.8
unitig_0.g782 Utricularia gibba HOM05D003823 ORTHO05D004866 8.8e-33 144.4 69 87.0
Sabra15G0049800 Salix brachista HOM05D003823 ORTHO05D000412 3.3e-32 142.5 70 98.6
Gohir.A01G072501 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.4e-27 127.1 62 87.1
Gohir.A05G203200 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.4e-27 127.1 62 87.1
Gohir.A10G203700 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.4e-27 127.1 62 87.1
Gohir.A12G000600 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.4e-27 127.1 62 87.1
Gohir.D06G205050 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.4e-27 127.1 62 87.1
Gohir.D08G111400 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.4e-27 127.1 62 87.1
Sabra15G0057900 Salix brachista HOM05D003823 ORTHO05D349330 1.2e-16 90.9 51 90.2
Gorai.005G095900 Gossypium raimondii HOM05D003823 ORTHO05D218813 1.7e-15 87.0 44 90.9
Duzib248G1489 Durio zibethinus HOM05D003823 ORTHO05D186086 5.3e-14 82.0 55 74.5


User provided reference genes

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