Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G158000 Glycine max HOM05D001397 ORTHO05D000246 2.6e-68 261.9 133 100.0
Glyma.07G242500 Glycine max HOM05D001397 ORTHO05D001300 1.9e-26 122.9 67 89.6
Glyma.17G031700 Glycine max HOM05D001397 ORTHO05D001300 1.7e-22 109.8 67 82.1
Phvul.003G111000 Phaseolus vulgaris HOM05D001397 ORTHO05D001300 1.2e-17 93.6 75 64.0
VMungo1215G1129 Vigna mungo HOM05D001397 ORTHO05D001300 2.1e-17 92.8 75 62.7
Glyma.14G047000 Glycine max HOM05D000779 ORTHO05D000246 4.9e-14 81.6 50 82.0
Glyma.02G269900 Glycine max HOM05D000779 ORTHO05D000246 1.4e-13 80.1 50 80.0
VMungo0647G0834 Vigna mungo HOM05D000779 ORTHO05D000246 1.4e-13 80.1 50 80.0
Phvul.008G212100 Phaseolus vulgaris HOM05D000779 ORTHO05D000246 3.2e-13 79.0 50 78.0
LjContig00564g0013607 Lotus japonicus HOM05D000779 ORTHO05D000246 7.0e-13 77.8 50 76.0
Ca_06106_v3 Cicer arietinum L. HOM05D000779 ORTHO05D000246 3.9e-11 72.0 50 68.0
Medtr4g121470 Medicago truncatula HOM05D001397 ORTHO05D001300 5.0e-11 71.6 79 50.6
Ca_21458_v3 Cicer arietinum L. HOM05D001397 ORTHO05D001300 6.6e-11 71.2 76 52.6
arahy.Tifrunner.gnm1.ann1.7GLL8J Arachis hypogaea HOM05D001397 ORTHO05D001300 8.6e-11 70.9 76 52.6
arahy.Tifrunner.gnm1.ann1.H5PABG Arachis hypogaea HOM05D001397 ORTHO05D001300 8.6e-11 70.9 76 52.6
TPR.G14450 Trifolium pratense HOM05D000779 ORTHO05D000246 8.6e-11 70.9 50 68.0
Psat2g025800 Pisum sativum HOM05D000779 ORTHO05D000246 1.9e-10 69.7 50 68.0
Lalb_Chr12g0200971 Lupinus albus HOM05D001397 ORTHO05D001300 4.7e-09 65.1 76 51.3
Medtr5g085860 Medicago truncatula HOM05D000779 ORTHO05D000246 4.7e-09 65.1 52 69.2
TPR.G16832 Trifolium pratense HOM05D001397 ORTHO05D001300 4.7e-09 65.1 75 49.3
Lj4g0024053 Lotus japonicus HOM05D001397 ORTHO05D001300 1.8e-08 63.2 73 52.1
Psat4g023200 Pisum sativum HOM05D001397 ORTHO05D001300 3.1e-08 62.4 75 48.0
Lalb_Chr04g0249941 Lupinus albus HOM05D000779 ORTHO05D000246 1.5e-07 60.1 51 56.9
CiPaw.03G156800 Carya illinoinensis HOM05D000779 ORTHO05D000246 3.4e-07 58.9 50 60.0
MELO3C007417.2 Cucumis melo HOM05D000779 ORTHO05D000246 3.4e-07 58.9 76 44.7
CsaV3_6G048730 Cucumis sativus L. HOM05D000779 ORTHO05D000246 3.4e-07 58.9 76 44.7
Lj4g0001811 Lotus japonicus HOM05D000779 ORTHO05D000246 4.4e-07 58.5 44 61.4
Haze_12781 Corylus avellana HOM05D000779 ORTHO05D000246 7.5e-07 57.8 63 49.2
ClCG02G002200 Citrullus lanatus HOM05D000779 ORTHO05D000246 1.3e-06 57.0 50 56.0
Sed0010436 Sechium edule HOM05D000779 ORTHO05D000246 1.3e-06 57.0 50 56.0
QL08p031058 Quercus lobata HOM05D000779 ORTHO05D000246 1.7e-06 56.6 63 46.0
CiPaw.04G111400 Carya illinoinensis HOM05D000779 ORTHO05D000246 2.9e-06 55.8 63 50.8
Dinv39740 Davidia involucrata HOM05D000779 ORTHO05D000246 2.9e-06 55.8 45 60.0
CsaV3_7G003300 Cucumis sativus L. HOM05D000779 ORTHO05D000246 4.9e-06 55.1 50 56.0
THA.LOC104825275 Tarenaya hassleriana HOM05D000779 ORTHO05D000246 4.9e-06 55.1 62 43.5
ClCG01G021690 Citrullus lanatus HOM05D000779 ORTHO05D000246 6.4e-06 54.7 45 57.8
MD10G1326500 Malus domestica HOM05D000779 ORTHO05D000246 6.4e-06 54.7 49 55.1
CANSAT56G3935 Cannabis sativa HOM05D000779 ORTHO05D000246 8.3e-06 54.3 49 55.1
Dinv13938 Davidia involucrata HOM05D000779 ORTHO05D000246 8.3e-06 54.3 45 60.0
HanXRQChr15g0470571 Helianthus annuus HOM05D000779 ORTHO05D000246 8.3e-06 54.3 45 60.0
Hma1.2p1_0298F.1_g117470 Hydrangea macrophylla HOM05D000779 ORTHO05D000246 8.3e-06 54.3 45 60.0
Prupe.4G015200 Prunus persica HOM05D000779 ORTHO05D000246 8.3e-06 54.3 45 60.0
QL05p071925 Quercus lobata HOM05D000779 ORTHO05D000246 8.3e-06 54.3 45 60.0
vmacro03665 Vaccinium macrocarpon HOM05D000779 ORTHO05D000246 8.3e-06 54.3 45 57.8


User provided reference genes

Program Settings