Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 6.0e-253 877.1 461 100.0
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 3.4e-232 808.1 461 92.2
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 6.4e-231 803.9 461 91.8
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 8.4e-231 803.5 461 92.4
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 1.4e-222 776.2 461 87.2
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 2.4e-222 775.4 464 87.5
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 2.1e-221 772.3 462 87.4
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 4.3e-219 764.6 461 86.6
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 4.8e-218 761.1 461 85.7
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 3.1e-217 758.4 465 87.1
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 4.5e-216 754.6 465 86.7
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 9.3e-214 746.9 461 81.8
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 1.8e-212 742.7 441 87.3
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 2.3e-212 742.3 461 82.6
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 4.5e-208 728.0 462 83.1
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 2.9e-207 725.3 465 82.6
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 2.9e-207 725.3 461 83.3
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 3.8e-207 724.9 461 81.1
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.1e-206 723.4 461 82.6
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 3.0e-204 715.3 461 77.7
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 3.9e-204 714.9 462 78.8
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 3.3e-203 711.8 461 78.3
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 2.8e-202 708.8 461 78.7
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 1.8e-201 706.1 469 80.8
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.8e-201 706.1 463 79.0
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 6.9e-201 704.1 461 77.4
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 1.0e-199 700.3 461 77.7
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 1.3e-199 699.9 461 77.7
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 5.0e-199 698.0 461 77.7
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 6.5e-199 697.6 462 79.4
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.4e-198 696.4 461 77.4
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 3.2e-198 695.3 466 77.5
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 4.2e-198 694.9 461 77.4
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 4.2e-198 694.9 461 77.4
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 7.2e-198 694.1 466 78.8
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 7.2e-198 694.1 461 80.0
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 2.7e-197 692.2 461 75.9
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 2.3e-196 689.1 460 79.8
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 2.3e-196 689.1 466 77.0
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 5.1e-196 688.0 462 76.4
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 8.8e-196 687.2 461 76.4
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 2.0e-195 686.0 461 75.5
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 2.8e-194 682.2 464 75.9
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 3.7e-194 681.8 462 76.4
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 2.4e-193 679.1 462 76.0
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 2.4e-193 679.1 424 81.8
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.4e-193 679.1 462 76.6
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 2.4e-193 679.1 461 76.4
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 6.9e-193 677.6 488 74.8
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 3.4e-192 675.2 461 74.4
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 5.9e-192 674.5 469 76.1
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 1.0e-191 673.7 424 81.1
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.0e-191 673.7 468 74.8
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 2.2e-191 672.5 459 75.2
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 3.8e-191 671.8 461 74.8
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.4e-190 669.8 464 76.1
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 3.2e-190 668.7 468 75.2
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 4.2e-190 668.3 456 76.3
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 4.2e-190 668.3 461 73.8
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 9.4e-190 667.2 469 77.2
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 1.2e-189 666.8 464 74.1
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 1.2e-189 666.8 469 74.6
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 2.1e-189 666.0 464 74.4
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 3.0e-188 662.1 461 75.1
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 3.0e-188 662.1 464 73.9
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 8.8e-188 660.6 464 73.9
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 8.8e-188 660.6 464 72.8
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 8.8e-188 660.6 463 75.2
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 2.6e-187 659.1 468 73.5
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 4.4e-187 658.3 464 74.4
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 4.4e-187 658.3 464 74.4
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 4.4e-187 658.3 464 74.4
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 5.7e-187 657.9 481 71.3
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 7.4e-187 657.5 460 74.3
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 9.7e-187 657.1 467 73.4
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 1.4e-185 653.3 464 73.3
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 7.0e-185 651.0 467 73.9
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 9.1e-185 650.6 465 73.8
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 9.1e-185 650.6 469 72.7
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 1.2e-184 650.2 464 72.8
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 1.2e-184 650.2 494 70.0
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.6e-184 649.8 463 74.1
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 2.0e-184 649.4 465 73.5
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 2.0e-184 649.4 464 73.3
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 5.9e-184 647.9 509 66.6
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 7.7e-184 647.5 465 73.1
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 6.5e-183 644.4 465 74.4
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 1.5e-182 643.3 468 73.5
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 7.2e-182 641.0 463 72.1
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 9.4e-182 640.6 465 74.2
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 9.4e-182 640.6 465 74.0
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.2e-181 640.2 462 74.5
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 1.8e-180 636.3 462 72.1
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.0e-180 635.6 489 69.3
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 4.0e-180 635.2 403 77.7
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 2.8e-178 629.0 417 75.5
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 6.3e-178 627.9 462 73.8
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 3.5e-176 622.1 465 69.7
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 2.2e-175 619.4 470 70.0
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 1.5e-174 616.7 461 70.1
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.6e-173 613.2 399 76.2
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 3.0e-172 609.0 417 72.4
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 6.8e-172 607.8 462 67.5
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 5.7e-171 604.7 457 69.8
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 2.8e-170 602.4 457 67.8
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 4.2e-166 588.6 465 68.6
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 3.4e-163 578.9 417 69.1
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 1.4e-161 573.5 456 65.1
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 4.1e-161 572.0 415 71.8
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.2e-157 560.5 399 71.2
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 4.1e-145 518.8 382 72.3
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 6.2e-141 505.0 399 62.2
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 1.8e-140 503.4 316 80.4
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 1.7e-135 486.9 469 57.6
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 8.9e-132 474.6 401 58.1
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.8e-116 423.7 463 51.8
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 5.6e-102 375.6 287 64.5
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.2e-99 367.9 417 51.3
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 4.5e-99 365.9 258 77.5
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 1.4e-97 360.9 536 38.6
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 6.1e-80 302.4 188 79.3
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 9.4e-73 278.5 269 59.9
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 6.3e-61 239.2 255 56.5
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 8.2e-61 238.8 255 56.5
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 6.1e-56 222.6 207 62.8
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 8.6e-50 202.2 156 68.6
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 4.5e-43 179.9 148 64.9
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 5.6e-41 172.9 161 61.5
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.6e-40 171.4 119 75.6
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 5.4e-36 156.4 125 65.6
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 8.3e-29 132.5 377 28.1
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 2.3e-23 114.4 60 90.0
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 7.8e-19 99.4 59 79.7
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 3.3e-17 94.0 57 82.5
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 1.1e-15 89.0 73 65.8
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 2.0e-06 58.2 63 55.6


User provided reference genes

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