Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 1.8e-221 772.3 393 100.0
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 3.0e-205 718.4 395 93.4
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 6.5e-200 700.7 397 90.2
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 1.4e-189 666.4 397 85.6
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 3.5e-185 651.7 375 89.1
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 1.5e-183 646.4 390 83.8
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 5.2e-181 637.9 398 82.2
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 4.9e-179 631.3 397 82.4
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 3.9e-176 621.7 393 79.4
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 4.7e-174 614.8 395 80.0
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 2.2e-171 605.9 419 74.5
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 7.8e-161 570.9 347 84.1
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 2.4e-154 549.3 393 72.5
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 4.1e-154 548.5 400 69.8
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.1e-153 546.2 402 69.7
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.9e-152 542.0 400 69.2
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 3.9e-152 542.0 408 69.1
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.2e-150 537.0 403 71.5
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 1.6e-150 536.6 395 70.4
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 1.8e-149 533.1 392 70.9
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.4e-149 532.7 392 70.9
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 2.4e-149 532.7 392 70.9
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 5.8e-148 528.1 412 69.7
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 5.8e-148 528.1 403 70.7
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 9.9e-148 527.3 390 71.0
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.3e-147 526.9 409 69.4
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 1.7e-147 526.6 402 68.7
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 4.9e-147 525.0 402 70.4
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 1.4e-146 523.5 397 67.3
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 1.9e-146 523.1 397 67.3
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 1.2e-145 520.4 404 68.3
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 2.7e-145 519.2 402 69.2
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 5.1e-144 515.0 393 70.5
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 5.6e-143 511.5 400 67.0
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 7.3e-143 511.1 390 66.9
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 3.1e-141 505.8 408 67.6
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 9.0e-141 504.2 392 65.8
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 2.0e-140 503.1 395 66.3
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 2.0e-140 503.1 395 66.6
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 7.6e-140 501.1 394 66.5
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.9e-139 499.2 402 66.2
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 6.4e-139 498.0 402 65.9
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 8.4e-139 497.7 393 64.4
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 2.4e-138 496.1 393 64.4
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 3.2e-138 495.7 394 65.2
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 9.3e-138 494.2 399 65.2
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 3.0e-136 489.2 393 63.6
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 1.5e-135 486.9 396 65.2
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 1.3e-134 483.8 395 66.1
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 1.6e-134 483.4 401 62.6
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 3.6e-134 482.3 395 66.6
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 2.4e-133 479.6 364 69.5
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 9.0e-133 477.6 395 64.8
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 1.5e-132 476.9 395 67.3
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 2.2e-131 473.0 393 63.6
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 3.8e-131 472.2 396 63.4
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 4.9e-131 471.9 409 64.3
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 8.4e-131 471.1 400 64.5
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.9e-130 469.9 398 63.6
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 5.1e-128 461.8 424 58.7
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 2.5e-127 459.5 392 63.0
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 9.6e-127 457.6 395 64.8
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 2.8e-126 456.1 421 59.4
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 4.8e-126 455.3 386 63.7
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 6.2e-126 454.9 398 62.1
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 1.1e-125 454.1 390 63.3
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 1.4e-125 453.8 385 62.6
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 5.3e-125 451.8 399 60.2
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 3.4e-124 449.1 400 62.5
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 8.4e-123 444.5 406 60.3
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 1.1e-122 444.1 403 58.8
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 1.3e-120 437.2 400 59.0
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 1.3e-120 437.2 389 58.1
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 1.8e-120 436.8 399 59.1
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 2.3e-120 436.4 350 66.3
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.7e-119 431.8 334 69.2
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 1.3e-118 430.6 407 57.0
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.1e-117 427.6 444 54.1
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 1.4e-117 427.2 399 59.9
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 2.9e-115 419.5 379 59.1
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 9.3e-114 414.5 392 58.7
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 2.1e-113 413.3 310 71.0
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 2.7e-113 412.9 415 55.9
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 6.1e-113 411.8 394 56.9
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.0e-112 411.0 394 56.1
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 2.0e-108 396.7 291 72.5
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 1.7e-107 393.7 337 62.9
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 3.9e-104 382.5 349 56.7
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 8.2e-102 374.8 394 52.5
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 3.1e-101 372.9 409 55.3
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 1.2e-97 360.9 213 87.3
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 1.3e-94 350.9 457 44.4
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 9.1e-93 344.7 321 55.8
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.2e-92 344.4 266 68.8
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.3e-91 340.9 344 55.2
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 5.0e-91 339.0 421 46.1
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.5e-90 335.5 328 59.5
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 5.5e-90 335.5 392 46.2
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.4e-88 330.9 335 58.2
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.3e-88 330.1 337 57.9
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.7e-86 322.8 296 62.5
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.3e-86 322.0 296 62.5
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.3e-86 322.0 296 62.5
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.3e-86 322.0 296 62.5
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 8.8e-80 301.6 207 74.4
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 7.2e-74 282.0 282 59.2
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 7.0e-69 265.4 211 66.8
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 4.9e-54 216.1 591 31.1
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 7.1e-37 159.1 88 81.8
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.1e-32 145.2 132 58.3
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 2.9e-30 137.1 176 45.5
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.0e-27 128.6 209 37.8
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.8e-22 110.2 156 41.7
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 8.4e-22 109.0 120 50.0
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.3e-13 79.0 62 71.0
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.3e-13 79.0 62 71.0
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.3e-13 79.0 62 71.0
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 5.1e-11 73.2 46 73.9
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 4.3e-10 70.1 57 61.4
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 2.4e-08 64.3 39 79.5
Psat0s2301g0040 Pisum sativum HOM05D006533 ORTHO05D320805 3.1e-08 63.9 55 65.5


User provided reference genes

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