Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01038274001 Vitis vinifera HOM05D003257 ORTHO05D003749 2.6e-48 194.9 87 100.0
GSVIVG01019374001 Vitis vinifera HOM05D003257 ORTHO05D003749 1.7e-31 139.0 80 73.8
Nn7g37414 Nelumbo nucifera HOM05D003257 ORTHO05D003749 2.4e-30 135.2 80 72.5
CDE06G0339 Ceratophyllum demersum HOM05D003257 ORTHO05D003749 4.1e-30 134.4 80 71.2
FAN23G0512 Fragaria x ananassa HOM05D003257 ORTHO05D003749 7.0e-30 133.7 80 72.5
TAR362G0403 Trochodendron aralioides HOM05D003257 ORTHO05D003749 1.2e-29 132.9 80 70.0
TAR633G0285 Trochodendron aralioides HOM05D003257 ORTHO05D003749 1.2e-29 132.9 80 71.2
Aqoxy2G00629 Aquilegia oxysepala HOM05D003257 ORTHO05D003749 1.6e-29 132.5 80 73.8
MBI15_g33460_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 2.7e-29 131.7 81 71.6
Sc25g0002280 Simmondsia chinensis HOM05D003257 ORTHO05D003749 2.7e-29 131.7 80 72.5
Cfa008541 Carpinus fangiana HOM05D003257 ORTHO05D003749 6.0e-29 130.6 80 68.8
Nn1g09394 Nelumbo nucifera HOM05D003257 ORTHO05D003749 6.0e-29 130.6 80 70.0
MSTRG.24536 Avicennia marina HOM05D003257 ORTHO05D003749 7.8e-29 130.2 80 72.5
RcHm_v2.0_Chr2g0084261 Rosa chinensis HOM05D003257 ORTHO05D003749 7.8e-29 130.2 80 72.5
Haze_11091 Corylus avellana HOM05D003257 ORTHO05D003749 1.3e-28 129.4 80 67.5
FvH4_1g00040 Fragaria vesca HOM05D003257 ORTHO05D003749 1.7e-28 129.0 80 71.2
FAN26G1737 Fragaria x ananassa HOM05D003257 ORTHO05D003749 1.7e-28 129.0 80 71.2
FAN28G1981 Fragaria x ananassa HOM05D003257 ORTHO05D003749 1.7e-28 129.0 80 71.2
SGA_v2.0_scaffold25G11024 Striga asiatica HOM05D003257 ORTHO05D003749 1.7e-28 129.0 80 71.2
VMungo0647G2577 Vigna mungo HOM05D003257 ORTHO05D003749 1.7e-28 129.0 80 71.2
MBI15_g33461_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 2.3e-28 128.6 80 70.0
Prupe.7G271500 Prunus persica HOM05D003257 ORTHO05D003749 2.3e-28 128.6 80 71.2
MD15G1141700 Malus domestica HOM05D003257 ORTHO05D003749 3.9e-28 127.9 80 72.5
Glyma.04G256100 Glycine max HOM05D003257 ORTHO05D003749 6.6e-28 127.1 80 70.0
Actinidia18382 Actinidia chinensis HOM05D003257 ORTHO05D003749 8.6e-28 126.7 80 70.0
Cpa.g.sc9.233 Carica papaya HOM05D003257 ORTHO05D003749 8.6e-28 126.7 80 65.0
ClCG06G008390 Citrullus lanatus HOM05D003257 ORTHO05D003749 8.6e-28 126.7 80 67.5
Duzib268G1600 Durio zibethinus HOM05D003257 ORTHO05D003749 8.6e-28 126.7 80 67.5
Gohir.A09G206300 Gossypium hirsutum HOM05D003257 ORTHO05D003749 8.6e-28 126.7 80 68.8
Gohir.D09G199900 Gossypium hirsutum HOM05D003257 ORTHO05D003749 8.6e-28 126.7 80 68.8
Gorai.006G223600 Gossypium raimondii HOM05D003257 ORTHO05D003749 8.6e-28 126.7 80 68.8
Phvul.007G281200 Phaseolus vulgaris HOM05D003257 ORTHO05D003749 8.6e-28 126.7 80 68.8
QL10p065198 Quercus lobata HOM05D003257 ORTHO05D003749 8.6e-28 126.7 80 66.2
Atru.chr3.2621 Acer truncatum HOM05D003257 ORTHO05D003749 1.1e-27 126.3 80 68.8
arahy.Tifrunner.gnm1.ann1.BPEV7T Arachis hypogaea HOM05D003257 ORTHO05D003749 1.5e-27 125.9 80 68.8
Glyma.06G325300 Glycine max HOM05D003257 ORTHO05D003749 1.5e-27 125.9 80 68.8
unitig_27.g25139 Utricularia gibba HOM05D003257 ORTHO05D003749 1.5e-27 125.9 80 68.8
DCAR_027487 Daucus carota HOM05D003257 ORTHO05D003749 1.9e-27 125.6 80 66.2
Migut.N03006 Erythranthe guttata HOM05D003257 ORTHO05D003749 1.9e-27 125.6 80 66.2
MD00G1145100 Malus domestica HOM05D003257 ORTHO05D003749 1.9e-27 125.6 80 68.8
MD02G1001200 Malus domestica HOM05D003257 ORTHO05D003749 1.9e-27 125.6 80 68.8
CiPaw.01G204000 Carya illinoinensis HOM05D003257 ORTHO05D003749 2.5e-27 125.2 80 65.0
Thecc.04G195400 Theobroma cacao HOM05D003257 ORTHO05D003749 2.5e-27 125.2 80 67.5
arahy.Tifrunner.gnm1.ann1.ZYH4BX Arachis hypogaea HOM05D003257 ORTHO05D003749 3.3e-27 124.8 80 67.5
TWI15G1037 Tripterygium wilfordii HOM05D003257 ORTHO05D003749 3.3e-27 124.8 80 66.2
CiPaw.02G126200 Carya illinoinensis HOM05D003257 ORTHO05D003749 4.3e-27 124.4 80 65.0
CsaV3_2G011840 Cucumis sativus L. HOM05D003257 ORTHO05D003749 4.3e-27 124.4 80 65.0
Nitab4.5_0003263g0060 Nicotiana tabacum HOM05D003257 ORTHO05D003749 4.3e-27 124.4 78 70.5
Sed0018493 Sechium edule HOM05D003257 ORTHO05D003749 4.3e-27 124.4 80 66.2
PSO339G3074 Papaver somniferum HOM05D003257 ORTHO05D003749 5.6e-27 124.0 80 66.2
Ciclev10019406m.g Citrus clementina HOM05D003257 ORTHO05D003749 7.3e-27 123.6 80 66.2
Gohir.A10G127700 Gossypium hirsutum HOM05D003257 ORTHO05D003749 7.3e-27 123.6 80 66.2
Ah.07g203400 Amaranthus hybridus HOM05D003257 ORTHO05D003749 9.5e-27 123.2 78 69.2
AUR62002512 Chenopodium quinoa HOM05D003257 ORTHO05D003749 9.5e-27 123.2 78 69.2
Hma1.2p1_1372F.1_g278690 Hydrangea macrophylla HOM05D003257 ORTHO05D003749 9.5e-27 123.2 80 65.0
Potri.007G147300 Populus trichocarpa HOM05D003257 ORTHO05D003749 9.5e-27 123.2 80 70.0
Potri.017G000300 Populus trichocarpa HOM05D003257 ORTHO05D003749 9.5e-27 123.2 80 68.8
Duzib151G0199 Durio zibethinus HOM05D003257 ORTHO05D003749 1.2e-26 122.9 80 63.8
Sabra17G0005200 Salix brachista HOM05D003257 ORTHO05D003749 1.2e-26 122.9 80 68.8
TPR.G30222 Trifolium pratense HOM05D003257 ORTHO05D003749 1.2e-26 122.9 80 70.0
Duzib212G0020 Durio zibethinus HOM05D003257 ORTHO05D003749 1.6e-26 122.5 80 65.0
HanXRQChr04g0120771 Helianthus annuus HOM05D003257 ORTHO05D003749 1.6e-26 122.5 78 66.7
Medtr1g040105 Medicago truncatula HOM05D003257 ORTHO05D003749 1.6e-26 122.5 80 68.8
Oeu028194.1 Olea europaea HOM05D003257 ORTHO05D003749 1.6e-26 122.5 82 68.3
Os03g0815200 Oryza sativa ssp. japonica HOM05D003257 ORTHO05D003749 1.6e-26 122.5 80 67.5
AUR62023682 Chenopodium quinoa HOM05D003257 ORTHO05D003749 2.1e-26 122.1 78 69.2
Gohir.D10G138300 Gossypium hirsutum HOM05D003257 ORTHO05D003749 2.1e-26 122.1 80 66.2
Gorai.011G153400 Gossypium raimondii HOM05D003257 ORTHO05D003749 2.1e-26 122.1 80 66.2
Peaxi162Scf00344g00056 Petunia axillaris HOM05D003257 ORTHO05D003749 2.1e-26 122.1 78 66.7
CSS0014401 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 2.8e-26 121.7 81 64.2
CSS0029511 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 2.8e-26 121.7 81 64.2
Psat6g114760 Pisum sativum HOM05D003257 ORTHO05D003749 2.8e-26 121.7 80 68.8
Zm00001eb062180 Zea mays HOM05D003257 ORTHO05D003749 2.8e-26 121.7 80 67.5
Zm00001eb440710 Zea mays HOM05D003257 ORTHO05D003749 2.8e-26 121.7 80 67.5
EL10Ac3g06195 Beta vulgaris HOM05D003257 ORTHO05D003749 3.6e-26 121.3 78 67.9
ECA236G5120 Erigeron canadensis HOM05D003257 ORTHO05D003749 3.6e-26 121.3 78 65.4
Peaxi162Scf00156g00015 Petunia axillaris HOM05D003257 ORTHO05D003749 4.7e-26 120.9 78 67.9
CANSAT54G2167 Cannabis sativa HOM05D003257 ORTHO05D003749 6.2e-26 120.6 80 67.5
Ca_26297_v3 Cicer arietinum L. HOM05D003257 ORTHO05D003749 6.2e-26 120.6 80 67.5
PGR042G2645 Punica granatum HOM05D003257 ORTHO05D003749 6.2e-26 120.6 80 63.8
Sed0024427 Sechium edule HOM05D003257 ORTHO05D003749 6.2e-26 120.6 80 62.5
Eucgr.A00394 Eucalyptus grandis HOM05D003257 ORTHO05D003749 8.1e-26 120.2 80 62.5
Manes.01G008800 Manihot esculenta HOM05D003257 ORTHO05D003749 8.1e-26 120.2 80 63.8
CSS0030539 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 1.4e-25 119.4 81 63.0
CANSAT56G2399 Cannabis sativa HOM05D003257 ORTHO05D003749 1.4e-25 119.4 80 66.2
CAN.G1177.14 Capsicum annuum HOM05D003257 ORTHO05D003749 1.4e-25 119.4 78 66.7
Thhalv10005854m.g Eutrema salsugineum HOM05D003257 ORTHO05D003749 1.4e-25 119.4 80 63.8
PGSC0003DMG400023361 Solanum tuberosum HOM05D003257 ORTHO05D003749 1.4e-25 119.4 78 66.7
CAN.G694.27 Capsicum annuum HOM05D003257 ORTHO05D003749 1.8e-25 119.0 78 67.9
Lju124A8T11 Lonicera japonica HOM05D003257 ORTHO05D003749 1.8e-25 119.0 76 64.5
Lalb_Chr03g0037991 Lupinus albus HOM05D003257 ORTHO05D003749 1.8e-25 119.0 80 62.5
Aa31LG10G14190 Aethionema arabicum HOM05D003257 ORTHO05D003749 2.3e-25 118.6 81 61.7
Solyc05g055730.4 Solanum lycopersicum HOM05D003257 ORTHO05D003749 2.3e-25 118.6 78 66.7
Sopen05g034140 Solanum pennellii HOM05D003257 ORTHO05D003749 2.3e-25 118.6 78 66.7
THA.LOC104802525 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 2.3e-25 118.6 80 61.2
Lalb_Chr01g0020651 Lupinus albus HOM05D003257 ORTHO05D003749 3.1e-25 118.2 80 62.5
Sp5g03210 Schrenkiella parvula HOM05D003257 ORTHO05D003749 3.1e-25 118.2 80 62.5
ATR0053G017 Amborella trichopoda HOM05D003257 ORTHO05D003749 4.0e-25 117.9 80 60.0
BcaC07g40537 Brassica carinata HOM05D003257 ORTHO05D003749 4.0e-25 117.9 80 62.5
A09p52310 Brassica napus HOM05D003257 ORTHO05D003749 4.0e-25 117.9 80 62.5
C08p34970 Brassica napus HOM05D003257 ORTHO05D003749 4.0e-25 117.9 80 62.5
BolC8t51101H Brassica oleracea HOM05D003257 ORTHO05D003749 4.0e-25 117.9 80 62.5
PSO384G1169 Papaver somniferum HOM05D003257 ORTHO05D003749 4.0e-25 117.9 80 63.8
Sc19g0002470 Simmondsia chinensis HOM05D003257 ORTHO05D003749 4.0e-25 117.9 80 63.8
Lj3g0005174 Lotus japonicus HOM05D003257 ORTHO05D003749 5.2e-25 117.5 80 62.5
Nitab4.5_0001653g0120 Nicotiana tabacum HOM05D003257 ORTHO05D003749 5.2e-25 117.5 78 65.4
A05p04270 Brassica napus HOM05D003257 ORTHO05D003749 6.8e-25 117.1 80 65.0
BraA09t40660Z Brassica rapa HOM05D003257 ORTHO05D003749 8.9e-25 116.7 80 62.5
HanXRQChr06g0170341 Helianthus annuus HOM05D003257 ORTHO05D003749 8.9e-25 116.7 78 62.8
PGSC0003DMG400016168 Solanum tuberosum HOM05D003257 ORTHO05D003749 8.9e-25 116.7 78 64.1
Nitab4.5_0006595g0040 Nicotiana tabacum HOM05D003257 ORTHO05D003749 1.2e-24 116.3 78 64.1
THA.LOC104804412 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 1.2e-24 116.3 80 61.2
BcaB01g03327 Brassica carinata HOM05D003257 ORTHO05D003749 1.5e-24 115.9 80 65.0
BcaB06g29359 Brassica carinata HOM05D003257 ORTHO05D003749 1.5e-24 115.9 80 65.0
BraA05t19412Z Brassica rapa HOM05D003257 ORTHO05D003749 1.5e-24 115.9 80 63.8
Thhalv10001367m.g Eutrema salsugineum HOM05D003257 ORTHO05D003749 1.5e-24 115.9 80 65.0
Lsat_1_v5_gn_7_3921 Lactuca sativa HOM05D003257 ORTHO05D003749 1.5e-24 115.9 80 61.2
Sp4g26240 Schrenkiella parvula HOM05D003257 ORTHO05D003749 1.5e-24 115.9 80 65.0
BcaC08g45017 Brassica carinata HOM05D003257 ORTHO05D003749 2.0e-24 115.5 80 61.2
A07p24920 Brassica napus HOM05D003257 ORTHO05D003749 2.0e-24 115.5 80 61.2
C06p26490 Brassica napus HOM05D003257 ORTHO05D003749 2.0e-24 115.5 80 61.2
BolC6t37812H Brassica oleracea HOM05D003257 ORTHO05D003749 2.0e-24 115.5 80 61.2
BraA07t30134Z Brassica rapa HOM05D003257 ORTHO05D003749 2.0e-24 115.5 80 61.2
DCAR_005464 Daucus carota HOM05D003257 ORTHO05D003749 2.0e-24 115.5 80 63.8
BcaB06g29361 Brassica carinata HOM05D003257 ORTHO05D003749 2.6e-24 115.2 80 63.8
Carub.0005s2670 Capsella rubella HOM05D003257 ORTHO05D003749 2.6e-24 115.2 80 60.0
Solyc11g008870.2 Solanum lycopersicum HOM05D003257 ORTHO05D003749 2.6e-24 115.2 78 62.8
Sopen11g004650 Solanum pennellii HOM05D003257 ORTHO05D003749 2.6e-24 115.2 78 62.8
AL4G43040 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 3.4e-24 114.8 80 63.8
AL4G43080 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 3.4e-24 114.8 80 63.8
CARHR139330 Cardamine hirsuta HOM05D003257 ORTHO05D003749 3.4e-24 114.8 80 63.8
CARHR170290 Cardamine hirsuta HOM05D003257 ORTHO05D003749 3.4e-24 114.8 82 61.0
Dinv24735 Davidia involucrata HOM05D003257 ORTHO05D003749 4.4e-24 114.4 80 60.0
Aa31LG1G25830 Aethionema arabicum HOM05D003257 ORTHO05D003749 5.8e-24 114.0 80 62.5
AT2G44160 Arabidopsis thaliana HOM05D003257 ORTHO05D003749 5.8e-24 114.0 80 62.5
BcaC07g40402 Brassica carinata HOM05D003257 ORTHO05D003749 5.8e-24 114.0 80 61.2
A04p33220 Brassica napus HOM05D003257 ORTHO05D003749 5.8e-24 114.0 80 62.5
C04p70910 Brassica napus HOM05D003257 ORTHO05D003749 5.8e-24 114.0 80 62.5
BraA04t18781Z Brassica rapa HOM05D003257 ORTHO05D003749 5.8e-24 114.0 80 62.5
Carub.0004s2671 Capsella rubella HOM05D003257 ORTHO05D003749 5.8e-24 114.0 80 63.8
AL5G42150 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 7.5e-24 113.6 76 63.2
BolC4t22138H Brassica oleracea HOM05D003257 ORTHO05D003749 7.5e-24 113.6 80 62.5
BcaC02g12332 Brassica carinata HOM05D003257 ORTHO05D003749 2.2e-23 112.1 80 61.2
SalBow6G1509 Salvia bowleyana HOM05D003257 ORTHO05D003749 2.9e-23 111.7 68 70.6
AT3G59970 Arabidopsis thaliana HOM05D003257 ORTHO05D003749 3.7e-23 111.3 80 58.8
C04p05050 Brassica napus HOM05D003257 ORTHO05D003749 1.4e-22 109.4 80 61.2
SGA_v2.0_scaffold19G08917 Striga asiatica HOM05D003257 ORTHO05D003749 1.9e-22 109.0 73 64.4
SGA_v2.0_scaffold12G06250 Striga asiatica HOM05D003257 ORTHO05D003749 3.2e-22 108.2 107 48.6
HPP92_007573 Vanilla planifolia HOM05D003257 ORTHO05D003749 6.0e-21 104.0 66 66.7
AagrBONN_evm.TU.Sc2ySwM_344.3446 Anthoceros agrestis HOM05D003257 ORTHO05D003749 1.0e-20 103.2 80 56.2
SalBow3G4227 Salvia bowleyana HOM05D003257 ORTHO05D003749 1.0e-20 103.2 68 63.2
SMO367G0955 Selaginella moellendorffii HOM05D003257 ORTHO05D003749 1.0e-20 103.2 80 57.5
Hund22692 Selenicereus undatus HOM05D003257 ORTHO05D003749 1.0e-20 103.2 109 47.7
Nitab4.5_0000971g0090 Nicotiana tabacum HOM05D003257 ORTHO05D003749 2.3e-20 102.1 71 64.8
MELO3C027379.2 Cucumis melo HOM05D003257 ORTHO05D003749 1.1e-19 99.8 66 60.6
Rhsim09G0000900 Rhododendron simsii HOM05D003257 ORTHO05D003749 1.5e-19 99.4 112 43.8
vmacro00737 Vaccinium macrocarpon HOM05D003257 ORTHO05D003749 1.5e-19 99.4 67 61.2
Zm00001eb212100 Zea mays HOM05D003257 ORTHO05D003749 1.5e-19 99.4 82 54.9
Nitab4.5_0006595g0030 Nicotiana tabacum HOM05D003257 ORTHO05D003749 1.9e-19 99.0 76 59.2
SEGI_28465 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 1.9e-19 99.0 78 51.3
Mapoly0107s0040 Marchantia polymorpha HOM05D003257 ORTHO05D003749 1.6e-18 95.9 80 47.5
Pp3c10_24030 Physcomitrium patens HOM05D003257 ORTHO05D003749 8.1e-18 93.6 78 48.7
Pp3c24_960 Physcomitrium patens HOM05D003257 ORTHO05D003749 6.8e-17 90.5 80 48.8
CAN.G532.79 Capsicum annuum HOM05D003257 ORTHO05D003749 3.4e-16 88.2 60 61.7
CDE07G1142 Ceratophyllum demersum HOM05D003257 ORTHO05D003749 5.8e-16 87.4 54 68.5
COL.COLO4_20225 Corchorus olitorius HOM05D003257 ORTHO05D003749 7.6e-16 87.0 80 56.2
CBR_g37215 Chara braunii HOM05D003257 ORTHO05D003749 1.2e-13 79.7 77 45.5
Cre10.g433600 Chlamydomonas reinhardtii HOM05D003257 ORTHO05D003749 1.5e-08 62.8 83 34.9


User provided reference genes

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