Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01038168001 Vitis vinifera HOM05D000112 ORTHO05D439328 2.0e-103 379.0 185 100.0
GSVIVG01004942001 Vitis vinifera HOM05D000112 ORTHO05D000564 3.4e-13 79.3 157 36.9
CSS0029483 Camellia sinensis var. sinensis HOM05D000112 ORTHO05D000564 5.7e-13 78.6 127 42.5
CSS0048220 Camellia sinensis var. sinensis HOM05D000112 ORTHO05D000564 5.7e-13 78.6 119 42.9
CSS0000363 Camellia sinensis var. sinensis HOM05D000112 ORTHO05D000564 2.2e-12 76.6 121 42.1
CSS0048059 Camellia sinensis var. sinensis HOM05D000112 ORTHO05D000564 4.8e-12 75.5 119 42.0
PSO017G3230 Papaver somniferum HOM05D000112 ORTHO05D000564 1.1e-11 74.3 182 33.0
CSS0015329 Camellia sinensis var. sinensis HOM05D000112 ORTHO05D000564 1.8e-11 73.6 165 35.8
Aqoxy5G03168 Aquilegia oxysepala HOM05D000112 ORTHO05D000564 1.2e-10 70.9 157 33.1
Actinidia36839 Actinidia chinensis HOM05D000112 ORTHO05D000564 1.6e-10 70.5 205 31.7
CiPaw.06G108700 Carya illinoinensis HOM05D000112 ORTHO05D000564 2.0e-10 70.1 142 33.8
Nn3g16295 Nelumbo nucifera HOM05D000112 ORTHO05D000564 2.7e-10 69.7 210 31.0
HanXRQChr02g0034291 Helianthus annuus HOM05D000112 ORTHO05D000564 5.9e-10 68.6 142 34.5
Nn4g22158 Nelumbo nucifera HOM05D000112 ORTHO05D000564 5.9e-10 68.6 203 30.0
SalBow7G3518 Salvia bowleyana HOM05D000112 ORTHO05D000564 7.7e-10 68.2 157 33.8
CiPaw.05G102300 Carya illinoinensis HOM05D000112 ORTHO05D000564 1.0e-09 67.8 160 32.5
Sabra15G0125500 Salix brachista HOM05D000112 ORTHO05D000564 1.0e-09 67.8 157 33.1
PSO478G4419 Papaver somniferum HOM05D000112 ORTHO05D000564 1.3e-09 67.4 157 33.1
QL10p000789 Quercus lobata HOM05D000112 ORTHO05D000564 1.3e-09 67.4 157 34.4
Sabra12G0078400 Salix brachista HOM05D000112 ORTHO05D000564 1.7e-09 67.0 213 28.2
HanXRQChr05g0152981 Helianthus annuus HOM05D000112 ORTHO05D000564 2.3e-09 66.6 159 32.7
Thecc.03G139100 Theobroma cacao HOM05D000112 ORTHO05D000564 2.3e-09 66.6 157 34.4
Cc00_g12260 Coffea canephora HOM05D000112 ORTHO05D000564 2.9e-09 66.2 157 33.8
Manes.06G126000 Manihot esculenta HOM05D000112 ORTHO05D000564 2.9e-09 66.2 157 33.8
BraA02t09124Z Brassica rapa HOM05D000112 ORTHO05D000564 3.8e-09 65.9 165 31.5
CsaV3_1G000090 Cucumis sativus L. HOM05D000112 ORTHO05D000564 3.8e-09 65.9 157 33.1
Migut.D01190 Erythranthe guttata HOM05D000112 ORTHO05D000564 3.8e-09 65.9 159 32.7
Glyma.08G008100 Glycine max HOM05D000112 ORTHO05D000564 3.8e-09 65.9 157 33.8
CANSAT56G2993 Cannabis sativa HOM05D000112 ORTHO05D000564 5.0e-09 65.5 157 33.8
MELO3C026161.2 Cucumis melo HOM05D000112 ORTHO05D000564 5.0e-09 65.5 157 33.1
Migut.I00613 Erythranthe guttata HOM05D000112 ORTHO05D000564 5.0e-09 65.5 157 33.8
Gohir.D11G041800 Gossypium hirsutum HOM05D000112 ORTHO05D000564 5.0e-09 65.5 207 30.0
Gorai.007G044900 Gossypium raimondii HOM05D000112 ORTHO05D000564 5.0e-09 65.5 207 30.0
Lsat_1_v5_gn_1_32200 Lactuca sativa HOM05D000112 ORTHO05D000564 5.0e-09 65.5 151 32.5
Lsat_1_v5_gn_5_9980 Lactuca sativa HOM05D000112 ORTHO05D000564 5.0e-09 65.5 209 30.1
Cpa.g.c31756 Carica papaya HOM05D000112 ORTHO05D000564 6.5e-09 65.1 203 29.6
DCAR_025655 Daucus carota HOM05D000112 ORTHO05D000564 6.5e-09 65.1 208 29.3
Gohir.A11G038500 Gossypium hirsutum HOM05D000112 ORTHO05D000564 6.5e-09 65.1 207 30.0
Potri.015G105300 Populus trichocarpa HOM05D000112 ORTHO05D000564 6.5e-09 65.1 157 32.5
SalBow1G4443 Salvia bowleyana HOM05D000112 ORTHO05D000564 6.5e-09 65.1 157 32.5
Atru.chr6.1904 Acer truncatum HOM05D000112 ORTHO05D000564 8.6e-09 64.7 203 29.6
Ciclev10030696m.g Citrus clementina HOM05D000112 ORTHO05D000564 8.6e-09 64.7 203 29.1
Haze_07110 Corylus avellana HOM05D000112 ORTHO05D000564 8.6e-09 64.7 205 30.2
DCAR_016351 Daucus carota HOM05D000112 ORTHO05D000564 8.6e-09 64.7 170 31.8
Dinv23214 Davidia involucrata HOM05D000112 ORTHO05D000564 8.6e-09 64.7 157 32.5
Manes.14G045500 Manihot esculenta HOM05D000112 ORTHO05D000564 8.6e-09 64.7 157 33.1
Potri.012G106100 Populus trichocarpa HOM05D000112 ORTHO05D000564 8.6e-09 64.7 203 29.1
Solyc12g042070.3 Solanum lycopersicum HOM05D000112 ORTHO05D000564 8.6e-09 64.7 159 31.4
Sopen12g021160 Solanum pennellii HOM05D000112 ORTHO05D000564 8.6e-09 64.7 159 31.4
SGA_v2.0_scaffold143G35742 Striga asiatica HOM05D000112 ORTHO05D000564 8.6e-09 64.7 157 33.1
Duzib084G1271 Durio zibethinus HOM05D000112 ORTHO05D000564 1.1e-08 64.3 157 33.1
ECA246G1569 Erigeron canadensis HOM05D000112 ORTHO05D000564 1.1e-08 64.3 159 31.4
PGSC0003DMG400014179 Solanum tuberosum HOM05D000112 ORTHO05D000564 1.1e-08 64.3 157 32.5
ATR0582G007 Amborella trichopoda HOM05D000112 ORTHO05D000564 1.5e-08 63.9 168 32.7
CDE06G2409 Ceratophyllum demersum HOM05D000112 ORTHO05D000564 1.5e-08 63.9 142 32.4
Eucgr.K02197 Eucalyptus grandis HOM05D000112 ORTHO05D000564 1.5e-08 63.9 157 32.5
Thhalv10003641m.g Eutrema salsugineum HOM05D000112 ORTHO05D000564 1.5e-08 63.9 146 32.9
Glyma.04G200600 Glycine max HOM05D000112 ORTHO05D000564 1.5e-08 63.9 145 33.8
Sp2g25180 Schrenkiella parvula HOM05D000112 ORTHO05D000564 1.5e-08 63.9 146 32.9
Sed0027970 Sechium edule HOM05D000112 ORTHO05D000564 1.5e-08 63.9 157 33.1
MSTRG.22852 Avicennia marina HOM05D000112 ORTHO05D000564 1.9e-08 63.5 145 33.1
BcaNung01414 Brassica carinata HOM05D000112 ORTHO05D000564 1.9e-08 63.5 146 32.9
Gohir.D07G051500 Gossypium hirsutum HOM05D000112 ORTHO05D000564 1.9e-08 63.5 157 32.5
Phvul.002G282200 Phaseolus vulgaris HOM05D000112 ORTHO05D000564 1.9e-08 63.5 157 32.5
Solyc03g118290.3 Solanum lycopersicum HOM05D000112 ORTHO05D000564 1.9e-08 63.5 157 31.8
Sopen03g037200 Solanum pennellii HOM05D000112 ORTHO05D000564 1.9e-08 63.5 157 31.8
TAR371G0700 Trochodendron aralioides HOM05D000112 ORTHO05D000564 1.9e-08 63.5 212 29.2
VMungo0251G2726 Vigna mungo HOM05D000112 ORTHO05D000564 1.9e-08 63.5 157 32.5
AL8G38770 Arabidopsis lyrata HOM05D000112 ORTHO05D000564 2.5e-08 63.2 146 32.9
MSTRG.11230 Avicennia marina HOM05D000112 ORTHO05D000564 2.5e-08 63.2 159 31.4
BcaB07g29805 Brassica carinata HOM05D000112 ORTHO05D000564 2.5e-08 63.2 205 29.8
Carub.0008s2269 Capsella rubella HOM05D000112 ORTHO05D000564 2.5e-08 63.2 146 32.9
CARHR275800 Cardamine hirsuta HOM05D000112 ORTHO05D000564 2.5e-08 63.2 146 32.9
CiPaw.11G001200 Carya illinoinensis HOM05D000112 ORTHO05D000564 2.5e-08 63.2 157 32.5
Glyma.05G200800 Glycine max HOM05D000112 ORTHO05D000564 2.5e-08 63.2 157 33.1
Lj9C485G17 Lonicera japonica HOM05D000112 ORTHO05D000564 2.5e-08 63.2 159 32.1
Nitab4.5_0009686g0010 Nicotiana tabacum HOM05D000112 ORTHO05D000564 2.5e-08 63.2 147 34.0
TWI14G0723 Tripterygium wilfordii HOM05D000112 ORTHO05D000564 2.5e-08 63.2 209 29.7
TWI23G1013 Tripterygium wilfordii HOM05D000112 ORTHO05D000564 2.5e-08 63.2 205 30.7
TAR629G2310 Trochodendron aralioides HOM05D000112 ORTHO05D000564 2.5e-08 63.2 144 31.9
arahy.Tifrunner.gnm1.ann1.9IQ583 Arachis hypogaea HOM05D000112 ORTHO05D000564 3.2e-08 62.8 157 33.1
MSTRG.4640 Avicennia marina HOM05D000112 ORTHO05D000564 3.2e-08 62.8 157 32.5
CDE02G2098 Ceratophyllum demersum HOM05D000112 ORTHO05D000564 3.2e-08 62.8 146 32.2
ECA247G2487 Erigeron canadensis HOM05D000112 ORTHO05D000564 3.2e-08 62.8 159 32.1
FvH4_5g09310 Fragaria vesca HOM05D000112 ORTHO05D000564 3.2e-08 62.8 157 32.5
FAN18G4279 Fragaria x ananassa HOM05D000112 ORTHO05D000564 3.2e-08 62.8 157 32.5
Gorai.001G054600 Gossypium raimondii HOM05D000112 ORTHO05D000564 3.2e-08 62.8 157 32.5
RcHm_v2.0_Chr7g0188911 Rosa chinensis HOM05D000112 ORTHO05D000564 3.2e-08 62.8 157 32.5
Hund02501 Selenicereus undatus HOM05D000112 ORTHO05D000564 3.2e-08 62.8 157 31.8
PGSC0003DMG400014452 Solanum tuberosum HOM05D000112 ORTHO05D000564 3.2e-08 62.8 159 30.8
GSVIVG01008639001 Vitis vinifera HOM05D000112 ORTHO05D000564 3.2e-08 62.8 203 29.1
Ah.02g114640 Amaranthus hybridus HOM05D000112 ORTHO05D000564 4.2e-08 62.4 157 31.8
C02p61820 Brassica napus HOM05D000112 ORTHO05D000564 4.2e-08 62.4 165 30.9
CSS0023669 Camellia sinensis var. sinensis HOM05D000112 ORTHO05D000564 4.2e-08 62.4 157 31.8
Ca_17586_v3 Cicer arietinum L. HOM05D000112 ORTHO05D000564 4.2e-08 62.4 157 32.5
Gorai.008G210200 Gossypium raimondii HOM05D000112 ORTHO05D000564 4.2e-08 62.4 157 32.5
HanXRQChr17g0548581 Helianthus annuus HOM05D000112 ORTHO05D000564 4.2e-08 62.4 159 30.8
Medtr8g100050 Medicago truncatula HOM05D000112 ORTHO05D000564 4.2e-08 62.4 157 32.5
Peaxi162Scf01168g00016 Petunia axillaris HOM05D000112 ORTHO05D000564 4.2e-08 62.4 206 28.2
Psat7g038760 Pisum sativum HOM05D000112 ORTHO05D000564 4.2e-08 62.4 157 32.5
Hund10047 Selenicereus undatus HOM05D000112 ORTHO05D000564 4.2e-08 62.4 157 33.1
TPR.G12902 Trifolium pratense HOM05D000112 ORTHO05D000564 4.2e-08 62.4 157 32.5
HPP92_011739 Vanilla planifolia HOM05D000112 ORTHO05D000564 4.2e-08 62.4 157 31.2
Zm00001eb170540 Zea mays HOM05D000112 ORTHO05D000564 4.2e-08 62.4 157 30.6
CAN.G521.4 Capsicum annuum HOM05D000112 ORTHO05D000564 5.5e-08 62.0 159 29.6
COL.COLO4_37241 Corchorus olitorius HOM05D000112 ORTHO05D000564 5.5e-08 62.0 157 32.5
FAN13G1223 Fragaria x ananassa HOM05D000112 ORTHO05D000564 5.5e-08 62.0 204 28.4
Gohir.A07G047300 Gossypium hirsutum HOM05D000112 ORTHO05D000564 5.5e-08 62.0 157 32.5
Gohir.D12G195600 Gossypium hirsutum HOM05D000112 ORTHO05D000564 5.5e-08 62.0 157 32.5
MD06G1132100 Malus domestica HOM05D000112 ORTHO05D000564 5.5e-08 62.0 157 32.5
Sc04g0000240 Simmondsia chinensis HOM05D000112 ORTHO05D000564 5.5e-08 62.0 157 31.8
TAR622G0979 Trochodendron aralioides HOM05D000112 ORTHO05D000564 5.5e-08 62.0 156 34.0
CiPaw.12G001400 Carya illinoinensis HOM05D000112 ORTHO05D000564 7.2e-08 61.6 142 31.7
FAN04G2810 Fragaria x ananassa HOM05D000112 ORTHO05D000564 7.2e-08 61.6 204 28.4
FAN08G1299 Fragaria x ananassa HOM05D000112 ORTHO05D000564 7.2e-08 61.6 204 28.4
Glyma.06G164900 Glycine max HOM05D000112 ORTHO05D000564 7.2e-08 61.6 145 33.1
A06p28710 Brassica napus HOM05D000112 ORTHO05D000564 9.5e-08 61.2 142 31.7
CSS0015480 Camellia sinensis var. sinensis HOM05D000112 ORTHO05D000564 9.5e-08 61.2 159 31.4
PSO017G4814 Papaver somniferum HOM05D000112 ORTHO05D000564 9.5e-08 61.2 142 32.4
Phvul.009G161900 Phaseolus vulgaris HOM05D000112 ORTHO05D000564 9.5e-08 61.2 145 33.1
THA.LOC104819425 Tarenaya hassleriana HOM05D000112 ORTHO05D000564 9.5e-08 61.2 146 31.5
VMungo1309G1006 Vigna mungo HOM05D000112 ORTHO05D000564 9.5e-08 61.2 145 33.1
CDE09G1370 Ceratophyllum demersum HOM05D000112 ORTHO05D000564 1.2e-07 60.8 147 30.6
Eucgr.B03551 Eucalyptus grandis HOM05D000112 ORTHO05D000564 1.2e-07 60.8 157 30.6
Lalb_Chr07g0183771 Lupinus albus HOM05D000112 ORTHO05D000564 1.2e-07 60.8 145 31.0
Lalb_Chr12g0202461 Lupinus albus HOM05D000112 ORTHO05D000564 1.2e-07 60.8 145 31.7
Nitab4.5_0000663g0220 Nicotiana tabacum HOM05D000112 ORTHO05D000564 1.2e-07 60.8 157 31.2
PSO478G3516 Papaver somniferum HOM05D000112 ORTHO05D000564 1.2e-07 60.8 142 31.7
Prupe.5G143100 Prunus persica HOM05D000112 ORTHO05D000564 1.2e-07 60.8 157 31.8
Aa31LG11G1520 Aethionema arabicum HOM05D000112 ORTHO05D000564 1.6e-07 60.5 140 32.9
Duzib205G2058 Durio zibethinus HOM05D000112 ORTHO05D000564 1.6e-07 60.5 157 32.5
BcaC04g23432 Brassica carinata HOM05D000112 ORTHO05D000564 2.1e-07 60.1 146 31.5
A09p07480 Brassica napus HOM05D000112 ORTHO05D000564 2.1e-07 60.1 146 31.5
C09p08400 Brassica napus HOM05D000112 ORTHO05D000564 2.1e-07 60.1 146 31.5
BolC9t53750H Brassica oleracea HOM05D000112 ORTHO05D000564 2.1e-07 60.1 146 31.5
BraA09t36402Z Brassica rapa HOM05D000112 ORTHO05D000564 2.1e-07 60.1 146 31.5
Manes.08G102200 Manihot esculenta HOM05D000112 ORTHO05D000564 2.1e-07 60.1 159 29.6
Thecc.02G194100 Theobroma cacao HOM05D000112 ORTHO05D000564 2.1e-07 60.1 159 30.2
arahy.Tifrunner.gnm1.ann1.EBLC22 Arachis hypogaea HOM05D000112 ORTHO05D000564 2.8e-07 59.7 136 33.1
BcaC03g18114 Brassica carinata HOM05D000112 ORTHO05D000564 2.8e-07 59.7 146 32.9
BolC2t12237H Brassica oleracea HOM05D000112 ORTHO05D000564 2.8e-07 59.7 146 32.9
HanXRQChr04g0100261 Helianthus annuus HOM05D000112 ORTHO05D000564 2.8e-07 59.7 159 30.8
Lj5C88G6 Lonicera japonica HOM05D000112 ORTHO05D000564 2.8e-07 59.7 205 27.8
BcaB02g09612 Brassica carinata HOM05D000112 ORTHO05D000564 3.6e-07 59.3 146 31.5
Duzib068G1404 Durio zibethinus HOM05D000112 ORTHO05D000564 3.6e-07 59.3 157 31.2
Oeu013657.2 Olea europaea HOM05D000112 ORTHO05D000564 3.6e-07 59.3 157 32.5
MBI11_g11865_MAGBIO Magnolia biondii HOM05D000112 ORTHO05D000564 4.7e-07 58.9 145 32.4
SEGI_09939 Sequoiadendron giganteum HOM05D000112 ORTHO05D000564 4.7e-07 58.9 146 32.2
TWI18G1465 Tripterygium wilfordii HOM05D000112 ORTHO05D000564 4.7e-07 58.9 143 29.4
TWI39G0866 Tripterygium wilfordii HOM05D000112 ORTHO05D000564 4.7e-07 58.9 145 32.4
Zm00001eb142540 Zea mays HOM05D000112 ORTHO05D000564 4.7e-07 58.9 141 30.5
BcaB02g09613 Brassica carinata HOM05D000112 ORTHO05D000564 6.1e-07 58.5 141 31.2
CAN.G843.19 Capsicum annuum HOM05D000112 ORTHO05D000564 6.1e-07 58.5 140 31.4
CDE02G2022 Ceratophyllum demersum HOM05D000112 ORTHO05D000564 6.1e-07 58.5 157 29.3
Os01g0927600 Oryza sativa ssp. japonica HOM05D000112 ORTHO05D000564 6.1e-07 58.5 158 29.7
Zm00001eb363810 Zea mays HOM05D000112 ORTHO05D000564 6.1e-07 58.5 197 27.9
AT5G62000 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 8.0e-07 58.2 140 31.4
Lalb_Chr11g0069241 Lupinus albus HOM05D000112 ORTHO05D000564 8.0e-07 58.2 157 31.2
Oeu017195.1 Olea europaea HOM05D000112 ORTHO05D000564 8.0e-07 58.2 145 31.7
PGR102G1760 Punica granatum HOM05D000112 ORTHO05D000564 8.0e-07 58.2 137 29.9
HPP92_007048 Vanilla planifolia HOM05D000112 ORTHO05D000564 8.0e-07 58.2 157 28.7
Dinv13733 Davidia involucrata HOM05D000112 ORTHO05D000564 1.0e-06 57.8 146 32.9
Lalb_Chr13g0297001 Lupinus albus HOM05D000112 ORTHO05D000564 1.0e-06 57.8 141 30.5
Sabra01G0046100 Salix brachista HOM05D000112 ORTHO05D000564 1.0e-06 57.8 142 29.6
Ah.11g046800 Amaranthus hybridus HOM05D000112 ORTHO05D000564 1.8e-06 57.0 210 27.1
EL10Ac5g11300 Beta vulgaris HOM05D000112 ORTHO05D000564 1.8e-06 57.0 157 31.8
arahy.Tifrunner.gnm1.ann1.X40XE7 Arachis hypogaea HOM05D000112 ORTHO05D000564 2.3e-06 56.6 136 32.4
MD14G1148500 Malus domestica HOM05D000112 ORTHO05D000564 2.3e-06 56.6 140 31.4
Oeu005578.1 Olea europaea HOM05D000112 ORTHO05D000564 2.3e-06 56.6 157 31.8
C03p65050 Brassica napus HOM05D000112 ORTHO05D000564 3.0e-06 56.2 144 31.2
BolC3t18763H Brassica oleracea HOM05D000112 ORTHO05D000564 3.0e-06 56.2 144 31.2
BraA06t25811Z Brassica rapa HOM05D000112 ORTHO05D000564 3.0e-06 56.2 144 31.2
AUR62034763 Chenopodium quinoa HOM05D000112 ORTHO05D000564 3.0e-06 56.2 157 31.8
AUR62041688 Chenopodium quinoa HOM05D000112 ORTHO05D000564 3.0e-06 56.2 157 31.8
Haze_12491 Corylus avellana HOM05D000112 ORTHO05D000564 3.0e-06 56.2 38 68.4
Potri.001G066200 Populus trichocarpa HOM05D000112 ORTHO05D000564 3.0e-06 56.2 142 28.9
THA.LOC104801816 Tarenaya hassleriana HOM05D000112 ORTHO05D000564 3.0e-06 56.2 142 30.3
Rhsim08G0196200 Rhododendron simsii HOM05D000112 ORTHO05D000564 4.0e-06 55.8 141 31.2
Lj1g0018419 Lotus japonicus HOM05D000112 ORTHO05D000564 8.8e-06 54.7 145 29.7
Zm00001eb133000 Zea mays HOM05D000112 ORTHO05D000564 8.8e-06 54.7 166 28.3


User provided reference genes

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