Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037731001 Vitis vinifera HOM05D004295 ORTHO05D004901 2.3e-59 231.9 105 100.0
Dinv40798 Davidia involucrata HOM05D004295 ORTHO05D004901 7.9e-44 180.3 105 78.1
CSS0006554 Camellia sinensis var. sinensis HOM05D004295 ORTHO05D004901 5.7e-42 174.1 100 73.0
CSS0022956 Camellia sinensis var. sinensis HOM05D004295 ORTHO05D004901 5.7e-42 174.1 100 73.0
QL08p007634 Quercus lobata HOM05D004295 ORTHO05D004901 5.7e-42 174.1 104 73.1
TAR724G0001 Trochodendron aralioides HOM05D004295 ORTHO05D004901 1.7e-41 172.6 101 74.3
CiPaw.11G195000 Carya illinoinensis HOM05D004295 ORTHO05D004901 2.2e-41 172.2 101 73.3
Prupe.4G224000 Prunus persica HOM05D004295 ORTHO05D004901 2.8e-41 171.8 101 74.3
Cfa020273 Carpinus fangiana HOM05D004295 ORTHO05D004901 8.2e-41 170.2 100 75.0
Nn7g37915 Nelumbo nucifera HOM05D004295 ORTHO05D004901 1.5e-39 166.0 101 68.3
FvH4_3g23572 Fragaria vesca HOM05D004295 ORTHO05D004901 4.5e-39 164.5 101 71.3
Manes.15G066000 Manihot esculenta HOM05D004295 ORTHO05D004901 4.5e-39 164.5 105 68.6
TWI39G0230 Tripterygium wilfordii HOM05D004295 ORTHO05D004901 4.5e-39 164.5 105 71.4
CSS0023200 Camellia sinensis var. sinensis HOM05D004295 ORTHO05D004901 5.9e-39 164.1 105 71.4
CANSAT11G1231 Cannabis sativa HOM05D004295 ORTHO05D004901 7.7e-39 163.7 101 69.3
MD03G1193000 Malus domestica HOM05D004295 ORTHO05D004901 1.0e-38 163.3 101 69.3
RcHm_v2.0_Chr5g0041571 Rosa chinensis HOM05D004295 ORTHO05D004901 1.0e-38 163.3 100 71.0
Ciclev10007504m.g Citrus clementina HOM05D004295 ORTHO05D004901 1.7e-38 162.5 101 67.3
Potri.001G358900 Populus trichocarpa HOM05D004295 ORTHO05D004901 3.8e-38 161.4 103 66.0
COL.COLO4_09741 Corchorus olitorius HOM05D004295 ORTHO05D004901 5.0e-38 161.0 100 72.0
Thecc.07G027600 Theobroma cacao HOM05D004295 ORTHO05D004901 8.5e-38 160.2 105 68.6
TWI38G1745 Tripterygium wilfordii HOM05D004295 ORTHO05D004901 8.5e-38 160.2 106 70.8
MD11G1209200 Malus domestica HOM05D004295 ORTHO05D004901 2.5e-37 158.7 100 69.0
Atru.chr2.3536 Acer truncatum HOM05D004295 ORTHO05D004901 3.2e-37 158.3 101 65.3
Nn1g03330 Nelumbo nucifera HOM05D004295 ORTHO05D004901 9.4e-37 156.8 100 68.0
Actinidia37373 Actinidia chinensis HOM05D004295 ORTHO05D004901 1.2e-36 156.4 105 63.8
TAR629G3495 Trochodendron aralioides HOM05D004295 ORTHO05D004901 1.6e-36 156.0 89 76.4
Aqoxy1G04109 Aquilegia oxysepala HOM05D004295 ORTHO05D004901 2.1e-36 155.6 101 66.3
DCAR_013201 Daucus carota HOM05D004295 ORTHO05D004901 2.7e-36 155.2 105 63.8
Atru.chr2.3555 Acer truncatum HOM05D004295 ORTHO05D004901 4.7e-36 154.5 101 63.4
DCAR_022592 Daucus carota HOM05D004295 ORTHO05D004901 3.0e-35 151.8 100 64.0
FAN21G2245 Fragaria x ananassa HOM05D004295 ORTHO05D004901 3.0e-35 151.8 98 69.4
Gohir.D08G034800 Gossypium hirsutum HOM05D004295 ORTHO05D004901 5.1e-35 151.0 105 65.7
Gorai.004G032700 Gossypium raimondii HOM05D004295 ORTHO05D004901 5.1e-35 151.0 105 65.7
vmacro09687 Vaccinium macrocarpon HOM05D004295 ORTHO05D004901 5.1e-35 151.0 90 73.3
Haze_09750 Corylus avellana HOM05D004295 ORTHO05D004901 6.7e-35 150.6 90 74.4
Rhsim04G0016300 Rhododendron simsii HOM05D004295 ORTHO05D004901 2.6e-34 148.7 90 71.1
PSO302G0053 Papaver somniferum HOM05D004295 ORTHO05D004901 3.3e-34 148.3 100 65.0
Gohir.A08G024300 Gossypium hirsutum HOM05D004295 ORTHO05D004901 4.4e-34 147.9 105 64.8
PSO210G3166 Papaver somniferum HOM05D004295 ORTHO05D004901 3.7e-33 144.8 100 64.0
Eucgr.F03507 Eucalyptus grandis HOM05D004295 ORTHO05D004901 4.8e-33 144.4 100 63.0
Hma1.2p1_0036F.1_g023080 Hydrangea macrophylla HOM05D004295 ORTHO05D004901 1.8e-32 142.5 98 69.4
Oeu007995.1 Olea europaea HOM05D004295 ORTHO05D004901 2.4e-32 142.1 100 63.0
Sc16g0005710 Simmondsia chinensis HOM05D004295 ORTHO05D004901 2.4e-32 142.1 105 61.0
CAN.G337.52 Capsicum annuum HOM05D004295 ORTHO05D004901 4.1e-32 141.4 100 63.0
Phvul.008G272900 Phaseolus vulgaris HOM05D004295 ORTHO05D004901 5.3e-32 141.0 105 61.0
ECA246G1209 Erigeron canadensis HOM05D004295 ORTHO05D004901 9.1e-32 140.2 100 60.0
HanXRQChr05g0159731 Helianthus annuus HOM05D004295 ORTHO05D004901 5.9e-31 137.5 100 59.0
Glyma.02G295400 Glycine max HOM05D004295 ORTHO05D004901 2.2e-30 135.6 105 58.1
Migut.M01703 Erythranthe guttata HOM05D004295 ORTHO05D004901 2.9e-30 135.2 100 59.0
Glyma.14G018000 Glycine max HOM05D004295 ORTHO05D004901 2.9e-30 135.2 105 58.1
HanXRQChr13g0408281 Helianthus annuus HOM05D004295 ORTHO05D004901 2.9e-30 135.2 100 59.0
Sabra16G0236700 Salix brachista HOM05D004295 ORTHO05D004901 2.9e-30 135.2 92 62.0
MBI16_g42268_MAGBIO Magnolia biondii HOM05D004295 ORTHO05D004901 3.8e-30 134.8 89 62.9
Psat2g010080 Pisum sativum HOM05D004295 ORTHO05D004901 3.8e-30 134.8 105 58.1
SGA_v2.0_scaffold168G38508 Striga asiatica HOM05D004295 ORTHO05D004901 3.8e-30 134.8 101 59.4
arahy.Tifrunner.gnm1.ann1.9RR6WG Arachis hypogaea HOM05D004295 ORTHO05D004901 6.5e-30 134.0 105 56.2
arahy.Tifrunner.gnm1.ann1.WPCM0F Arachis hypogaea HOM05D004295 ORTHO05D004901 6.5e-30 134.0 105 56.2
MSTRG.6962 Avicennia marina HOM05D004295 ORTHO05D004901 6.5e-30 134.0 100 57.0
Oeu005986.1 Olea europaea HOM05D004295 ORTHO05D004901 8.5e-30 133.7 95 65.3
Medtr5g093940 Medicago truncatula HOM05D004295 ORTHO05D004901 1.1e-29 133.3 105 57.1
Sopen12g007410 Solanum pennellii HOM05D004295 ORTHO05D004901 1.1e-29 133.3 100 57.0
AUR62020337 Chenopodium quinoa HOM05D004295 ORTHO05D004901 1.5e-29 132.9 101 57.4
Dinv22227 Davidia involucrata HOM05D004295 ORTHO05D004901 1.5e-29 132.9 75 78.7
PGR031G2569 Punica granatum HOM05D004295 ORTHO05D004901 1.5e-29 132.9 105 61.0
Solyc07g065000.3 Solanum lycopersicum HOM05D004295 ORTHO05D004901 1.5e-29 132.9 100 59.0
PGSC0003DMG402022202 Solanum tuberosum HOM05D004295 ORTHO05D004901 1.5e-29 132.9 100 59.0
Sopen07g033210 Solanum pennellii HOM05D004295 ORTHO05D004901 1.9e-29 132.5 100 59.0
Cc05_g14350 Coffea canephora HOM05D004295 ORTHO05D004901 2.5e-29 132.1 100 55.0
ECA240G3846 Erigeron canadensis HOM05D004295 ORTHO05D004901 2.5e-29 132.1 100 58.0
Solyc12g014540.2 Solanum lycopersicum HOM05D004295 ORTHO05D004901 2.5e-29 132.1 100 57.0
Lalb_Chr10g0107181 Lupinus albus HOM05D004295 ORTHO05D004901 3.2e-29 131.7 105 57.1
TPR.G30656 Trifolium pratense HOM05D004295 ORTHO05D004901 3.2e-29 131.7 105 57.1
AUR62015886 Chenopodium quinoa HOM05D004295 ORTHO05D004901 4.2e-29 131.3 101 56.4
Ca_06350_v3 Cicer arietinum L. HOM05D004295 ORTHO05D004901 4.2e-29 131.3 105 56.2
Cpa.g.sc12.236 Carica papaya HOM05D004295 ORTHO05D004901 7.2e-29 130.6 89 66.3
Hund01951 Selenicereus undatus HOM05D004295 ORTHO05D004901 4.7e-28 127.9 101 56.4
Ah.06g182200 Amaranthus hybridus HOM05D004295 ORTHO05D004901 6.1e-28 127.5 105 55.2
LjContig00272g0028044 Lotus japonicus HOM05D004295 ORTHO05D004901 1.0e-27 126.7 105 54.3
Lsat_1_v5_gn_5_2601 Lactuca sativa HOM05D004295 ORTHO05D004901 8.8e-27 123.6 88 61.4
SHI26565 Sapria himalayana HOM05D004295 ORTHO05D004901 5.7e-26 120.9 81 64.2
FAN11G1876 Fragaria x ananassa HOM05D004295 ORTHO05D004901 9.7e-26 120.2 75 70.7
VMungo0647G0514 Vigna mungo HOM05D004295 ORTHO05D004901 1.3e-25 119.8 90 57.8
CAN.G791.3 Capsicum annuum HOM05D004295 ORTHO05D004901 4.8e-25 117.9 100 51.0
Nitab4.5_0001160g0060 Nicotiana tabacum HOM05D004295 ORTHO05D004901 4.8e-25 117.9 88 59.1
TAR626G0993 Trochodendron aralioides HOM05D004295 ORTHO05D004901 6.3e-25 117.5 101 56.4
Nitab4.5_0005221g0010 Nicotiana tabacum HOM05D004295 ORTHO05D004901 1.1e-24 116.7 88 58.0
EL10Ac4g07685 Beta vulgaris HOM05D004295 ORTHO05D004901 1.2e-23 113.2 91 57.1
SMO356G0590 Selaginella moellendorffii HOM05D004295 ORTHO05D004901 2.7e-23 112.1 101 49.5
Nitab4.5_0003989g0010 Nicotiana tabacum HOM05D004295 ORTHO05D004901 4.5e-23 111.3 88 55.7
Mapoly0085s0079 Marchantia polymorpha HOM05D004295 ORTHO05D004901 1.3e-22 109.8 103 47.6
Peaxi162Scf00339g01131 Petunia axillaris HOM05D004295 ORTHO05D004901 5.0e-22 107.8 106 49.1
ATR0561G279 Amborella trichopoda HOM05D004295 ORTHO05D004901 6.5e-22 107.5 95 47.4
ClCG10G005040 Citrullus lanatus HOM05D004295 ORTHO05D004901 5.2e-19 97.8 89 51.7
Pp3c24_16720 Physcomitrium patens HOM05D004295 ORTHO05D004901 4.4e-18 94.7 89 49.4
Peaxi162Scf00235g00827 Petunia axillaris HOM05D004295 ORTHO05D004901 7.5e-18 94.0 89 50.6
MELO3C014171.2 Cucumis melo HOM05D004295 ORTHO05D004901 1.8e-16 89.4 97 46.4
unitig_62.g23290 Utricularia gibba HOM05D004295 ORTHO05D004901 3.1e-16 88.6 76 53.9
AagrBONN_evm.TU.Sc2ySwM_344.2809 Anthoceros agrestis HOM05D004295 ORTHO05D004901 4.1e-16 88.2 93 45.2
CsaV3_3G004720 Cucumis sativus L. HOM05D004295 ORTHO05D004901 9.1e-16 87.0 97 45.4
Os06g0309000 Oryza sativa ssp. japonica HOM05D004295 ORTHO05D004901 1.6e-15 86.3 99 38.4
CiPaw.12G133900 Carya illinoinensis HOM05D004295 ORTHO05D004901 3.5e-15 85.1 79 51.9
Sed0002209 Sechium edule HOM05D004295 ORTHO05D004901 7.7e-15 84.0 94 43.6
Lj8A173T74 Lonicera japonica HOM05D004295 ORTHO05D004901 1.7e-14 82.8 53 66.0
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 3.8e-14 81.6 47 68.1
CDE04G3193 Ceratophyllum demersum HOM05D004295 ORTHO05D004901 8.5e-14 80.5 73 49.3
SEGI_19418 Sequoiadendron giganteum HOM05D004295 ORTHO05D004901 2.5e-13 79.0 70 51.4
Actinidia10753 Actinidia chinensis HOM05D004295 ORTHO05D004901 1.2e-10 70.1 39 71.8
Psat0s5g0080 Pisum sativum HOM05D004295 ORTHO05D004901 7.5e-10 67.4 44 65.9
Psat0s5g0040 Pisum sativum HOM05D004295 ORTHO05D004901 6.3e-09 64.3 44 63.6
TPR.G18377 Trifolium pratense HOM05D004295 ORTHO05D004901 8.3e-09 63.9 44 63.6
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 3.5e-07 58.5 44 56.8
Nitab4.5_0002338g0050 Nicotiana tabacum HOM05D004295 ORTHO05D004901 8.6e-06 53.9 37 56.8


User provided reference genes

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