Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 1.5e-187 659.4 347 100.0
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 1.1e-155 553.5 349 84.2
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 6.9e-153 544.3 341 83.3
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 4.5e-152 541.6 347 82.4
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 1.0e-151 540.4 347 83.9
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 6.0e-149 531.2 342 82.7
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 7.9e-149 530.8 338 82.8
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 3.0e-148 528.9 346 81.2
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 1.1e-147 526.9 333 83.8
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 1.5e-147 526.6 340 82.4
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 2.5e-147 525.8 355 80.3
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 3.3e-147 525.4 335 81.8
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 4.3e-147 525.0 338 81.4
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 5.7e-147 524.6 345 80.6
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 3.7e-146 521.9 342 81.6
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 3.1e-145 518.8 341 80.1
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 6.9e-145 517.7 349 79.4
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 1.5e-144 516.5 340 77.6
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 7.7e-144 514.2 336 79.2
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 7.7e-144 514.2 328 82.6
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 1.7e-143 513.1 335 81.2
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 5.0e-143 511.5 325 82.2
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 9.4e-142 507.3 333 80.8
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 1.6e-141 506.5 331 80.7
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 1.6e-141 506.5 343 77.8
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 6.1e-141 504.6 338 78.4
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 1.0e-140 503.8 331 80.4
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 5.1e-140 501.5 332 80.4
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 8.8e-140 500.7 331 80.4
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 1.5e-139 500.0 339 77.9
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 2.2e-138 496.1 342 75.7
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 4.8e-138 495.0 338 77.5
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 1.4e-137 493.4 335 77.0
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 2.4e-137 492.7 338 76.3
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 4.1e-137 491.9 332 78.9
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 6.9e-137 491.1 337 77.4
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 3.8e-135 485.3 336 75.6
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 8.5e-135 484.2 343 76.1
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 1.1e-134 483.8 340 72.9
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.9e-134 483.0 335 76.7
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 2.5e-134 482.6 334 75.7
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 2.1e-133 479.6 338 75.1
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 3.6e-133 478.8 333 76.3
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 6.1e-133 478.0 335 75.8
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 6.1e-133 478.0 335 76.1
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 7.9e-133 477.6 315 79.7
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 7.9e-133 477.6 347 72.9
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 2.3e-132 476.1 274 89.1
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 1.3e-130 470.3 336 72.0
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 2.2e-130 469.5 339 74.0
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 4.8e-130 468.4 331 74.6
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 3.1e-129 465.7 337 73.3
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 4.1e-129 465.3 367 71.7
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 9.1e-129 464.2 336 75.0
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 9.1e-129 464.2 332 74.7
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.2e-128 463.8 319 77.4
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 1.5e-128 463.4 331 73.7
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 1.5e-128 463.4 316 79.1
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 2.0e-128 463.0 336 75.6
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 3.5e-128 462.2 336 74.7
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 5.9e-128 461.5 329 73.6
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 7.7e-128 461.1 331 73.4
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 7.7e-128 461.1 331 73.4
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 7.7e-128 461.1 331 72.8
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 1.3e-127 460.3 331 73.1
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 1.7e-127 459.9 365 69.6
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 2.9e-127 459.1 331 73.1
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 6.5e-127 458.0 331 72.2
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 1.1e-126 457.2 342 71.9
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 1.9e-126 456.4 333 72.7
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 3.2e-126 455.7 333 73.3
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 3.2e-126 455.7 333 73.3
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 9.4e-126 454.1 364 70.6
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 1.6e-125 453.4 333 72.4
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 2.1e-125 453.0 311 77.2
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 2.1e-125 453.0 335 72.5
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 3.6e-125 452.2 414 64.5
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 6.1e-125 451.4 336 71.7
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 1.0e-124 450.7 344 69.8
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 1.4e-124 450.3 368 68.2
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 1.8e-124 449.9 335 71.3
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 2.3e-124 449.5 333 72.7
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 5.2e-124 448.4 331 71.9
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 5.7e-123 444.9 358 68.4
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 4.1e-121 438.7 345 70.1
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 2.2e-119 433.0 312 76.3
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 5.0e-119 431.8 312 71.5
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 1.5e-118 430.3 367 64.9
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 1.2e-117 427.2 311 72.3
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 2.1e-117 426.4 352 65.1
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 3.0e-116 422.5 309 71.5
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 3.4e-115 419.1 252 85.7
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 8.3e-114 414.5 294 75.5
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 1.1e-113 414.1 335 69.9
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 1.1e-113 414.1 274 77.7
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 9.1e-113 411.0 327 66.4
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 2.2e-111 406.4 276 76.8
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 2.5e-110 402.9 330 63.9
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 1.2e-109 400.6 299 71.2
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 1.4e-105 387.1 305 68.5
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 9.1e-105 384.4 337 61.7
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 2.7e-104 382.9 274 73.4
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 6.1e-101 371.7 300 65.3
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 8.9e-100 367.9 300 64.3
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 1.5e-99 367.1 248 73.8
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 6.3e-98 361.7 247 80.2
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 7.0e-97 358.2 219 84.5
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 7.8e-96 354.8 211 85.8
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 1.7e-95 353.6 308 60.1
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 1.4e-89 334.0 195 87.7
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 1.2e-88 330.9 313 55.9
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 7.8e-88 328.2 234 75.2
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 3.2e-81 306.2 274 58.4
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.7e-74 283.9 206 71.8
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 1.6e-72 277.3 200 73.0
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 2.7e-72 276.6 169 85.2
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 2.2e-66 256.9 200 70.0
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 8.1e-61 238.4 311 42.4
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 2.9e-50 203.4 150 72.0
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 1.9e-46 190.7 142 71.1
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 3.8e-42 176.4 275 41.8
Medtr4g031235 Medicago truncatula HOM05D005156 ORTHO05D006710 1.2e-35 154.8 104 76.9
EL10Ac8g19800 Beta vulgaris HOM05D005156 ORTHO05D006710 4.8e-29 132.9 110 65.5
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 6.9e-28 129.0 103 69.9
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 1.9e-25 120.9 224 37.5
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 6.1e-24 115.9 90 65.6
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 6.1e-24 115.9 246 37.0
SalBow6G0988 Salvia bowleyana HOM05D005156 ORTHO05D006710 1.8e-23 114.4 91 68.1
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 2.5e-22 110.5 118 57.6
EL10Ac2g04378 Beta vulgaris HOM05D005156 ORTHO05D006710 6.9e-20 102.4 99 52.5
EL10Ac3g06833 Beta vulgaris HOM05D005156 ORTHO05D006710 2.6e-19 100.5 81 58.0
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 5.9e-19 99.4 61 82.0
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 5.9e-19 99.4 62 82.3
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.0e-18 98.6 62 83.9
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.2e-18 97.4 62 83.9
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 2.9e-18 97.1 95 58.9
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 4.2e-17 93.2 58 84.5
MELO3C016526.2 Cucumis melo HOM05D005156 ORTHO05D006710 9.4e-17 92.0 55 87.3
SMO147G0310 Selaginella moellendorffii HOM05D000066 ORTHO05D373802 5.1e-15 86.3 106 47.2
Hma1.2p1_1115F.1_g258870 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.3e-10 71.6 50 70.0
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 1.1e-09 68.6 42 76.2
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 2.5e-09 67.4 75 48.0
Rhsim05G0077000 Rhododendron simsii HOM05D003003 ORTHO05D008343 4.2e-09 66.6 40 82.5
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 9.4e-09 65.5 40 77.5
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 2.1e-08 64.3 35 85.7
Rhsim07G0166700 Rhododendron simsii HOM05D005156 ORTHO05D050672 2.0e-06 57.8 69 47.8


User provided reference genes

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