Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01036486001 Vitis vinifera HOM05D007347 ORTHO05D009296 1.4e-183 647.1 654 100.0
CSS0000287 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 2.8e-70 270.8 174 75.3
CSS0049471 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 2.8e-70 270.8 174 75.3
Dinv34879 Davidia involucrata HOM05D007347 ORTHO05D009296 3.5e-65 253.8 174 72.4
Hma1.2p1_1364F.1_g278380 Hydrangea macrophylla HOM05D007347 ORTHO05D009296 1.7e-64 251.5 174 70.1
Actinidia18106 Actinidia chinensis HOM05D007347 ORTHO05D009296 6.6e-64 249.6 174 69.5
CiPaw.03G007800 Carya illinoinensis HOM05D007347 ORTHO05D009296 3.1e-61 240.7 177 67.2
Prupe.6G186200 Prunus persica HOM05D007347 ORTHO05D009296 4.0e-61 240.4 176 67.0
QL06p007153 Quercus lobata HOM05D007347 ORTHO05D009296 4.0e-61 240.4 178 67.4
RcHm_v2.0_Chr6g0269561 Rosa chinensis HOM05D007347 ORTHO05D009296 4.4e-60 236.9 186 65.6
Cfa007995 Carpinus fangiana HOM05D007347 ORTHO05D009296 9.9e-60 235.7 178 66.3
Haze_14081 Corylus avellana HOM05D007347 ORTHO05D009296 1.3e-59 235.3 177 66.1
RcHm_v2.0_Chr2g0114451 Rosa chinensis HOM05D007347 ORTHO05D009296 3.8e-59 233.8 176 68.2
Cpa.g.sc16.131 Carica papaya HOM05D007347 ORTHO05D009296 8.4e-59 232.6 172 66.3
Lj4P128T51 Lonicera japonica HOM05D007347 ORTHO05D009296 1.9e-58 231.5 167 70.7
Ciclev10011342m.g Citrus clementina HOM05D007347 ORTHO05D009296 2.4e-58 231.1 178 65.2
TWI15G0869 Tripterygium wilfordii HOM05D007347 ORTHO05D009296 1.2e-57 228.8 168 66.7
FAN23G0923 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.6e-57 228.4 176 66.5
FAN23G0930 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.6e-57 228.4 176 66.5
FAN26G2104 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.6e-57 228.4 176 66.5
FvH4_1g20970 Fragaria vesca HOM05D007347 ORTHO05D009296 3.5e-57 227.3 176 65.9
MD15G1324700 Malus domestica HOM05D007347 ORTHO05D009296 6.0e-57 226.5 176 65.9
FAN19G1358 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.3e-56 225.3 176 65.9
TAR371G0226 Trochodendron aralioides HOM05D007347 ORTHO05D009296 1.7e-56 224.9 178 61.2
TAR629G3514 Trochodendron aralioides HOM05D007347 ORTHO05D009296 1.7e-56 224.9 178 61.2
Cc07_g04830 Coffea canephora HOM05D007347 ORTHO05D009296 8.7e-56 222.6 174 62.1
Lsat_1_v5_gn_2_86161 Lactuca sativa HOM05D007347 ORTHO05D009296 8.7e-56 222.6 177 63.3
MSTRG.24902 Avicennia marina HOM05D007347 ORTHO05D009296 1.5e-55 221.9 169 65.1
SalBow1G8225 Salvia bowleyana HOM05D007347 ORTHO05D009296 4.3e-55 220.3 174 60.3
MBI03_g44527_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 2.1e-54 218.0 187 56.7
Migut.H00560 Erythranthe guttata HOM05D007347 ORTHO05D009296 2.8e-54 217.6 174 60.3
HanXRQChr14g0448021 Helianthus annuus HOM05D007347 ORTHO05D009296 4.8e-54 216.9 177 63.3
Potri.017G108600 Populus trichocarpa HOM05D007347 ORTHO05D009296 4.8e-54 216.9 183 60.7
Eucgr.I02100 Eucalyptus grandis HOM05D007347 ORTHO05D009296 6.2e-54 216.5 174 64.4
CANSAT64G0714 Cannabis sativa HOM05D007347 ORTHO05D009296 1.1e-53 215.7 179 62.0
MELO3C026797.2 Cucumis melo HOM05D007347 ORTHO05D009296 6.9e-53 213.0 164 63.4
Manes.18G103700 Manihot esculenta HOM05D007347 ORTHO05D009296 6.9e-53 213.0 172 61.6
Sc10g0001490 Simmondsia chinensis HOM05D007347 ORTHO05D009296 9.0e-53 212.6 174 61.5
Sabra17G0091200 Salix brachista HOM05D007347 ORTHO05D009296 1.2e-52 212.2 183 59.0
SGA_v2.0_scaffold204G41666 Striga asiatica HOM05D007347 ORTHO05D009296 1.2e-52 212.2 174 58.6
Duzib138G0808 Durio zibethinus HOM05D007347 ORTHO05D009296 2.6e-52 211.1 166 60.8
Sopen04g021380 Solanum pennellii HOM05D007347 ORTHO05D009296 3.4e-52 210.7 174 57.5
CsaV3_5G013240 Cucumis sativus L. HOM05D007347 ORTHO05D009296 5.8e-52 209.9 164 62.8
Lj3g0007423 Lotus japonicus HOM05D007347 ORTHO05D009296 2.9e-51 207.6 160 65.0
Peaxi162Scf00004g02628 Petunia axillaris HOM05D007347 ORTHO05D009296 4.9e-51 206.8 174 56.3
Solyc04g050550.3 Solanum lycopersicum HOM05D007347 ORTHO05D009296 6.4e-51 206.5 174 56.3
Nn3g18549 Nelumbo nucifera HOM05D007347 ORTHO05D009296 1.4e-50 205.3 174 56.3
ATR0124G035 Amborella trichopoda HOM05D007347 ORTHO05D009296 1.9e-50 204.9 174 56.3
CAN.G71.18 Capsicum annuum HOM05D007347 ORTHO05D009296 4.2e-50 203.8 174 58.0
AUR62019500 Chenopodium quinoa HOM05D007347 ORTHO05D009296 4.2e-50 203.8 165 58.2
ClCG11G001180 Citrullus lanatus HOM05D007347 ORTHO05D009296 4.2e-50 203.8 177 59.3
Glyma.15G236300 Glycine max HOM05D007347 ORTHO05D009296 4.2e-50 203.8 165 62.4
Phvul.011G207300 Phaseolus vulgaris HOM05D007347 ORTHO05D009296 1.6e-49 201.8 173 59.0
Thecc.04G145700 Theobroma cacao HOM05D007347 ORTHO05D009296 4.6e-49 200.3 177 56.5
Glyma.13G197700 Glycine max HOM05D007347 ORTHO05D009296 6.0e-49 199.9 165 61.2
Lalb_Chr19g0132391 Lupinus albus HOM05D007347 ORTHO05D009296 6.0e-49 199.9 173 59.5
VMungo1127G1072 Vigna mungo HOM05D007347 ORTHO05D009296 6.0e-49 199.9 173 59.0
PSO782G5207 Papaver somniferum HOM05D007347 ORTHO05D009296 1.3e-48 198.7 174 54.6
Sed0006376 Sechium edule HOM05D007347 ORTHO05D009296 1.3e-48 198.7 177 58.8
Nitab4.5_0007154g0010 Nicotiana tabacum HOM05D007347 ORTHO05D009296 1.8e-48 198.4 165 58.8
Aqoxy3G04330 Aquilegia oxysepala HOM05D007347 ORTHO05D009296 2.3e-48 198.0 161 59.0
Psat4g145840 Pisum sativum HOM05D007347 ORTHO05D009296 3.9e-48 197.2 164 58.5
Gohir.A03G183300 Gossypium hirsutum HOM05D007347 ORTHO05D009296 6.7e-48 196.4 158 60.1
Gohir.D02G204900 Gossypium hirsutum HOM05D007347 ORTHO05D009296 8.7e-48 196.1 158 58.9
Gorai.005G232200 Gossypium raimondii HOM05D007347 ORTHO05D009296 8.7e-48 196.1 158 58.9
Medtr8g039270 Medicago truncatula HOM05D007347 ORTHO05D009296 2.5e-47 194.5 173 54.9
Ah.16g102100 Amaranthus hybridus HOM05D007347 ORTHO05D009296 2.1e-46 191.4 165 58.2
TPR.G30433 Trifolium pratense HOM05D007347 ORTHO05D009296 3.7e-46 190.7 160 57.5
Manes.02G063016 Manihot esculenta HOM05D002460 ORTHO05D002716 5.3e-45 186.8 167 58.1
FAN28G0832 Fragaria x ananassa HOM05D007347 ORTHO05D009296 2.5e-42 177.9 150 62.7
THA.LOC104805542 Tarenaya hassleriana HOM05D007347 ORTHO05D009296 5.1e-40 170.2 171 52.6
Aa31LG9G16920 Aethionema arabicum HOM05D007347 ORTHO05D009296 1.1e-39 169.1 180 49.4
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 2.5e-39 167.9 167 53.9
Thhalv10028323m.g Eutrema salsugineum HOM05D007347 ORTHO05D009296 1.6e-38 165.2 184 48.4
SpUn0124_0020 Schrenkiella parvula HOM05D007347 ORTHO05D009296 8.2e-38 162.9 171 50.9
SpUn0185_0030 Schrenkiella parvula HOM05D007347 ORTHO05D009296 8.2e-38 162.9 171 50.9
AT5G38730 Arabidopsis thaliana HOM05D007347 ORTHO05D009296 5.3e-37 160.2 180 48.9
Carub.0007s3713 Capsella rubella HOM05D007347 ORTHO05D009296 2.6e-36 157.9 180 47.2
AL7G51690 Arabidopsis lyrata HOM05D007347 ORTHO05D009296 3.4e-36 157.5 180 47.8
BcaB06g27240 Brassica carinata HOM05D007347 ORTHO05D009296 1.7e-35 155.2 168 47.6
Atru.chr10.1870 Acer truncatum HOM05D007347 ORTHO05D009296 2.9e-35 154.5 188 44.1
BraA04t16830Z Brassica rapa HOM05D007347 ORTHO05D009296 4.9e-35 153.7 168 47.6
A04p11620 Brassica napus HOM05D007347 ORTHO05D009296 1.4e-34 152.1 168 47.0
BcaC02g09666 Brassica carinata HOM05D007347 ORTHO05D009296 5.5e-34 150.2 168 46.4
C04p45350 Brassica napus HOM05D007347 ORTHO05D009296 5.5e-34 150.2 168 46.4
BolC4t26117H Brassica oleracea HOM05D007347 ORTHO05D009296 5.5e-34 150.2 168 46.4
ECA238G4434 Erigeron canadensis HOM05D007347 ORTHO05D009296 7.4e-31 139.8 94 71.3
AUR62036136 Chenopodium quinoa HOM05D007347 ORTHO05D009296 1.8e-29 135.2 94 68.1
MBI03_g13436_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 1.2e-28 132.5 94 66.0
COL.COLO4_23655 Corchorus olitorius HOM05D007347 ORTHO05D009296 3.4e-28 131.0 94 67.0
COL.COLO4_37044 Corchorus olitorius HOM05D007347 ORTHO05D009296 1.8e-21 108.6 68 76.5
Ca_23964_v3 Cicer arietinum L. HOM05D007347 ORTHO05D009296 2.4e-21 108.2 74 68.9
Oeu033427.1 Olea europaea HOM05D007347 ORTHO05D009296 5.7e-15 87.0 67 61.2
DCAR_010986 Daucus carota HOM05D007347 ORTHO05D009296 1.1e-13 82.8 69 56.5
Rhsim10G0062500 Rhododendron simsii HOM05D007347 ORTHO05D009296 1.4e-13 82.4 77 54.5
Actinidia09786 Actinidia chinensis HOM05D006931 ORTHO05D008782 1.4e-10 72.4 153 31.4
Lj3g0013378 Lotus japonicus HOM05D006931 ORTHO05D008782 1.4e-10 72.4 153 31.4
Lj3g0024796 Lotus japonicus HOM05D006931 ORTHO05D008782 1.4e-10 72.4 153 31.4
MBI03_g44528_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 1.9e-10 72.0 66 51.5
QL05p074803 Quercus lobata HOM05D007956 ORTHO05D010152 2.5e-10 71.6 179 27.4
Carub.0007s1417 Capsella rubella HOM05D006931 ORTHO05D008782 4.2e-10 70.9 153 26.8
Cpa.g.sc211.20 Carica papaya HOM05D006931 ORTHO05D008782 5.5e-10 70.5 153 27.5
AL7G26160 Arabidopsis lyrata HOM05D006931 ORTHO05D008782 7.2e-10 70.1 153 26.8
Thhalv10024897m.g Eutrema salsugineum HOM05D006931 ORTHO05D008782 7.2e-10 70.1 153 27.5
BcaC09g52253 Brassica carinata HOM05D006931 ORTHO05D008782 9.4e-10 69.7 155 26.5
BraA01t01749Z Brassica rapa HOM05D003050 ORTHO05D003513 9.4e-10 69.7 153 28.1
CARHR234290 Cardamine hirsuta HOM05D006931 ORTHO05D008782 9.4e-10 69.7 153 26.1
SGA_v2.0_scaffold4G02364 Striga asiatica HOM05D007347 ORTHO05D009296 9.4e-10 69.7 61 52.5
C01p22740 Brassica napus HOM05D003050 ORTHO05D003513 1.2e-09 69.3 153 26.8
Gorai.007G306300 Gossypium raimondii HOM05D006888 ORTHO05D008371 1.2e-09 69.3 167 29.9
AT4G26680 Arabidopsis thaliana HOM05D006931 ORTHO05D008782 1.6e-09 68.9 153 26.8
A01p17940 Brassica napus HOM05D003050 ORTHO05D003513 1.6e-09 68.9 153 27.5
FAN05G5053 Fragaria x ananassa HOM05D006931 ORTHO05D008782 1.6e-09 68.9 164 26.8
Gohir.A11G273300 Gossypium hirsutum HOM05D006888 ORTHO05D008371 1.6e-09 68.9 167 30.5
Gohir.D11G283400 Gossypium hirsutum HOM05D006888 ORTHO05D008371 1.6e-09 68.9 167 29.9
Manes.16G011600 Manihot esculenta HOM05D007956 ORTHO05D010152 1.6e-09 68.9 180 28.3
Dinv26621 Davidia involucrata HOM05D006931 ORTHO05D008782 2.1e-09 68.6 140 28.6
BcaC09g50628 Brassica carinata HOM05D006931 ORTHO05D008782 2.7e-09 68.2 153 26.8
BolC1t02203H Brassica oleracea HOM05D003050 ORTHO05D003513 2.7e-09 68.2 153 26.8
Sp7g24650 Schrenkiella parvula HOM05D006931 ORTHO05D008782 2.7e-09 68.2 153 26.1
SEGI_39034 Sequoiadendron giganteum HOM05D007675 ORTHO05D009699 2.7e-09 68.2 171 26.3
Aa31LG5G12250 Aethionema arabicum HOM05D006931 ORTHO05D008782 3.6e-09 67.8 153 26.8
PGSC0003DMG400006142 Solanum tuberosum HOM05D006931 ORTHO05D008782 3.6e-09 67.8 153 27.5
Hund04386 Selenicereus undatus HOM05D006931 ORTHO05D008782 4.7e-09 67.4 148 27.7
CSS0032219 Camellia sinensis var. sinensis HOM05D006931 ORTHO05D008782 6.1e-09 67.0 153 28.1
CSS0037608 Camellia sinensis var. sinensis HOM05D006931 ORTHO05D008782 6.1e-09 67.0 153 28.1
COL.COLO4_06641 Corchorus olitorius HOM05D007956 ORTHO05D010152 6.1e-09 67.0 170 27.6
QL03p013638 Quercus lobata HOM05D006888 ORTHO05D008371 6.1e-09 67.0 157 29.9
CDE05G1387 Ceratophyllum demersum HOM05D007347 ORTHO05D009296 8.0e-09 66.6 68 45.6
TAR371G0190 Trochodendron aralioides HOM05D007545 ORTHO05D009579 8.0e-09 66.6 116 31.9
Atru.chr6.3406 Acer truncatum HOM05D006931 ORTHO05D008782 1.4e-08 65.9 152 30.3
ATR0124G055 Amborella trichopoda HOM05D007347 ORTHO05D009296 1.4e-08 65.9 67 44.8
AUR62003544 Chenopodium quinoa HOM05D006931 ORTHO05D008782 1.4e-08 65.9 153 26.1
QL03p039859 Quercus lobata HOM05D006888 ORTHO05D008371 1.4e-08 65.9 157 29.3
CARHR264050 Cardamine hirsuta HOM05D007347 ORTHO05D009296 1.8e-08 65.5 52 53.8
Hund23024 Selenicereus undatus HOM05D006931 ORTHO05D008782 1.8e-08 65.5 140 27.9
SEGI_04891 Sequoiadendron giganteum HOM05D006888 ORTHO05D008371 1.8e-08 65.5 160 25.6
TAR629G0629 Trochodendron aralioides HOM05D007956 ORTHO05D010152 1.8e-08 65.5 179 26.3
Solyc07g047620.3 Solanum lycopersicum HOM05D006931 ORTHO05D008782 2.3e-08 65.1 153 26.8
Zm00001eb259350 Zea mays HOM05D007347 ORTHO05D009296 2.3e-08 65.1 157 31.8
AUR62017857 Chenopodium quinoa HOM05D006931 ORTHO05D008782 3.0e-08 64.7 158 27.2
RcHm_v2.0_Chr2g0156201 Rosa chinensis HOM05D006931 ORTHO05D008782 3.9e-08 64.3 164 23.8
Sed0019973 Sechium edule HOM05D006931 ORTHO05D008782 3.9e-08 64.3 164 25.0
Sopen07g024110 Solanum pennellii HOM05D006931 ORTHO05D008782 3.9e-08 64.3 153 26.1
PSO017G5257 Papaver somniferum HOM05D007545 ORTHO05D009579 5.2e-08 63.9 149 30.9
MSTRG.10694 Avicennia marina HOM05D006931 ORTHO05D008782 6.7e-08 63.5 166 26.5
Cc05_g02580 Coffea canephora HOM05D006931 ORTHO05D008782 1.1e-07 62.8 151 29.8
ClCG02G009270 Citrullus lanatus HOM05D006931 ORTHO05D008782 1.5e-07 62.4 166 25.9
FvH4_6g40750 Fragaria vesca HOM05D006931 ORTHO05D008782 1.5e-07 62.4 164 25.0
FAN14G4269 Fragaria x ananassa HOM05D006931 ORTHO05D008782 1.5e-07 62.4 164 25.0
Manes.06G016000 Manihot esculenta HOM05D006931 ORTHO05D008782 1.5e-07 62.4 148 25.7
Prupe.3G199000 Prunus persica HOM05D006931 ORTHO05D008782 1.5e-07 62.4 141 27.0
Thecc.06G215000 Theobroma cacao HOM05D007956 ORTHO05D010152 1.5e-07 62.4 170 26.5
Prupe.3G166000 Prunus persica HOM05D007545 ORTHO05D009579 2.0e-07 62.0 148 27.0
SGA_v2.0_scaffold204G41677 Striga asiatica HOM05D007347 ORTHO05D009296 2.0e-07 62.0 52 55.8
Atru.chr8.1831 Acer truncatum HOM05D004255 ORTHO05D004815 2.6e-07 61.6 166 31.3
TPR.G8749 Trifolium pratense HOM05D006931 ORTHO05D008782 2.6e-07 61.6 152 26.3
CAN.G805.1 Capsicum annuum HOM05D006931 ORTHO05D008782 3.3e-07 61.2 149 26.8
ATR0661G317 Amborella trichopoda HOM05D007545 ORTHO05D009579 4.4e-07 60.8 123 33.3
Aqoxy3G04069 Aquilegia oxysepala HOM05D007545 ORTHO05D009579 4.4e-07 60.8 149 30.9
Ciclev10018243m.g Citrus clementina HOM05D006931 ORTHO05D008782 4.4e-07 60.8 153 26.8
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 4.4e-07 60.8 165 27.3
SEGI_11241 Sequoiadendron giganteum HOM05D007496 ORTHO05D009479 4.4e-07 60.8 167 24.6
CANSAT64G0807 Cannabis sativa HOM05D006931 ORTHO05D008782 5.7e-07 60.5 153 26.1
Phvul.010G143400 Phaseolus vulgaris HOM05D006931 ORTHO05D008782 5.7e-07 60.5 156 30.1
Cfa000267 Carpinus fangiana HOM05D007956 ORTHO05D010152 7.4e-07 60.1 182 28.0
Medtr7g090340 Medicago truncatula HOM05D006931 ORTHO05D008782 7.4e-07 60.1 151 25.2
COL.COLO4_05553 Corchorus olitorius HOM05D004265 ORTHO05D005175 9.7e-07 59.7 170 28.8
DCAR_014992 Daucus carota HOM05D004255 ORTHO05D004815 9.7e-07 59.7 168 23.2
Oeu047722.1 Olea europaea HOM05D004255 ORTHO05D004815 9.7e-07 59.7 154 28.6
Oeu064824.1 Olea europaea HOM05D006888 ORTHO05D008371 1.3e-06 59.3 116 26.7
CSS0008426 Camellia sinensis var. sinensis HOM05D004255 ORTHO05D004815 1.7e-06 58.9 168 26.2
THA.LOC104808862 Tarenaya hassleriana HOM05D006931 ORTHO05D008782 1.7e-06 58.9 164 24.4
CsaV3_6G009550 Cucumis sativus L. HOM05D006931 ORTHO05D008782 2.2e-06 58.5 164 25.0
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 2.2e-06 58.5 119 31.9
Zm00001eb373330 Zea mays HOM05D000424 ORTHO05D000355 2.2e-06 58.5 173 27.2
Glyma.08G199100 Glycine max HOM05D006931 ORTHO05D008782 2.8e-06 58.2 158 29.1
Psat4g195880 Pisum sativum HOM05D006931 ORTHO05D008782 2.8e-06 58.2 152 24.3
Haze_12642 Corylus avellana HOM05D006931 ORTHO05D008782 4.8e-06 57.4 153 25.5
MELO3C025970.2 Cucumis melo HOM05D006931 ORTHO05D008782 4.8e-06 57.4 164 24.4
Gohir.D05G200100 Gossypium hirsutum HOM05D007639 ORTHO05D009509 4.8e-06 57.4 157 24.2
EL10Ac6g15337 Beta vulgaris HOM05D006931 ORTHO05D008782 6.3e-06 57.0 153 24.8
Gorai.009G205400 Gossypium raimondii HOM05D007639 ORTHO05D009509 6.3e-06 57.0 157 24.2
BcaB05g24640 Brassica carinata HOM05D000424 ORTHO05D000355 8.2e-06 56.6 171 27.5
Carub.0008s1619 Capsella rubella HOM05D007390 ORTHO05D009114 8.2e-06 56.6 116 27.6
CiPaw.09G087900 Carya illinoinensis HOM05D007956 ORTHO05D010152 8.2e-06 56.6 190 26.3
TAR628G1500 Trochodendron aralioides HOM05D005287 ORTHO05D006893 8.2e-06 56.6 120 30.8
VMungo0331G0870 Vigna mungo HOM05D006931 ORTHO05D008782 8.2e-06 56.6 156 29.5


User provided reference genes

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