Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034858001 Vitis vinifera HOM05D004913 ORTHO05D006150 2.9e-28 127.9 66 100.0
GSVIVG01018096001 Vitis vinifera HOM05D004913 ORTHO05D006150 5.2e-17 90.5 56 82.1
Cpa.g.sc58.23 Carica papaya HOM05D004913 ORTHO05D006150 3.7e-15 84.3 56 73.2
TAR636G2191 Trochodendron aralioides HOM05D004913 ORTHO05D006150 4.1e-14 80.9 57 75.4
Nn1g02556 Nelumbo nucifera HOM05D004913 ORTHO05D006150 1.6e-13 79.0 56 71.4
Ciclev10005381m.g Citrus clementina HOM05D004913 ORTHO05D006150 4.5e-13 77.4 58 72.4
Manes.15G035800 Manihot esculenta HOM05D004913 ORTHO05D006150 4.5e-13 77.4 59 72.9
PSO210G5612 Papaver somniferum HOM05D004913 ORTHO05D006150 4.5e-13 77.4 56 66.1
PSO832G0934 Papaver somniferum HOM05D004913 ORTHO05D006150 4.5e-13 77.4 56 66.1
Thecc.04G244000 Theobroma cacao HOM05D004913 ORTHO05D006150 3.9e-12 74.3 58 70.7
Duzib151G0562 Durio zibethinus HOM05D004913 ORTHO05D006150 6.6e-12 73.6 58 69.0
CiPaw.02G117800 Carya illinoinensis HOM05D004913 ORTHO05D006150 8.6e-12 73.2 56 69.6
Sabra08G0122700 Salix brachista HOM05D004913 ORTHO05D006150 1.1e-11 72.8 61 68.9
Eucgr.H03172 Eucalyptus grandis HOM05D004913 ORTHO05D006150 1.9e-11 72.0 56 67.9
THA.LOC104815979 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 1.9e-11 72.0 58 67.2
ClCG05G004680 Citrullus lanatus HOM05D000979 ORTHO05D003182 2.5e-11 71.6 56 69.6
Gorai.006G070100 Gossypium raimondii HOM05D004913 ORTHO05D006150 2.5e-11 71.6 58 69.0
Manes.03G170000 Manihot esculenta HOM05D004913 ORTHO05D006150 2.5e-11 71.6 59 69.5
Cc03_g04640 Coffea canephora HOM05D004913 ORTHO05D006150 3.3e-11 71.2 60 66.7
Duzib052G0554 Durio zibethinus HOM05D004913 ORTHO05D006150 3.3e-11 71.2 58 69.0
Gohir.A09G057300 Gossypium hirsutum HOM05D004913 ORTHO05D006150 5.6e-11 70.5 58 67.2
Potri.010G078500 Populus trichocarpa HOM05D004913 ORTHO05D006150 5.6e-11 70.5 62 71.0
Oeu032612.1 Olea europaea HOM05D004913 ORTHO05D006150 7.3e-11 70.1 61 65.6
CSS0025455 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D006150 9.5e-11 69.7 67 62.7
Potri.008G160800 Populus trichocarpa HOM05D004913 ORTHO05D006150 1.2e-10 69.3 61 65.6
Sed0018032 Sechium edule HOM05D004913 ORTHO05D003182 1.6e-10 68.9 56 67.9
Dinv44614 Davidia involucrata HOM05D004913 ORTHO05D006150 2.1e-10 68.6 61 67.2
CSS0009777 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D003182 3.6e-10 67.8 66 62.1
THA.LOC104826068 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 3.6e-10 67.8 59 64.4
Gohir.D10G152000 Gossypium hirsutum HOM05D004913 ORTHO05D006150 4.7e-10 67.4 58 65.5
Gorai.011G170500 Gossypium raimondii HOM05D004913 ORTHO05D006150 4.7e-10 67.4 58 65.5
HanXRQChr12g0381181 Helianthus annuus HOM05D004913 ORTHO05D006150 8.0e-10 66.6 59 67.8
Thhalv10003245m.g Eutrema salsugineum HOM05D004913 ORTHO05D006150 1.0e-09 66.2 61 62.3
Gohir.A10G114500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 1.0e-09 66.2 58 63.8
MBI11_g38514_MAGBIO Magnolia biondii HOM05D004913 ORTHO05D006150 1.0e-09 66.2 61 62.3
RcHm_v2.0_Chr5g0043971 Rosa chinensis HOM05D004913 ORTHO05D006150 1.0e-09 66.2 57 64.9
Actinidia05471 Actinidia chinensis HOM05D004913 ORTHO05D006150 1.4e-09 65.9 66 59.1
TWI09G0491 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 1.4e-09 65.9 57 66.7
TWI73G0814 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 1.4e-09 65.9 57 66.7
AL1G13830 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 1.8e-09 65.5 59 61.0
MELO3C006479.2 Cucumis melo HOM05D004913 ORTHO05D006150 1.8e-09 65.5 54 68.5
Sp2g08510 Schrenkiella parvula HOM05D004913 ORTHO05D006150 1.8e-09 65.5 60 61.7
AUR62041210 Chenopodium quinoa HOM05D004913 ORTHO05D006150 2.3e-09 65.1 57 64.9
CsaV3_3G012680 Cucumis sativus L. HOM05D004913 ORTHO05D006150 2.3e-09 65.1 56 64.3
COL.COLO4_15768 Corchorus olitorius HOM05D000979 ORTHO05D003182 3.1e-09 64.7 58 67.2
Migut.N00232 Erythranthe guttata HOM05D004913 ORTHO05D006150 3.1e-09 64.7 65 61.5
MD13G1204100 Malus domestica HOM05D004913 ORTHO05D006150 3.1e-09 64.7 57 66.7
Carub.0008s0491 Capsella rubella HOM05D004913 ORTHO05D006150 4.0e-09 64.3 60 58.3
AT1G04230 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 5.2e-09 63.9 59 59.3
CDE04G3353 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 6.8e-09 63.5 50 66.0
PGR004G2231 Punica granatum HOM05D004913 ORTHO05D006150 6.8e-09 63.5 58 63.8
AL37U10050 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 8.9e-09 63.2 59 57.6
AL8G16560 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 8.9e-09 63.2 59 57.6
Carub.0001s0342 Capsella rubella HOM05D004913 ORTHO05D006150 1.2e-08 62.8 63 55.6
Sed0027984 Sechium edule HOM05D004913 ORTHO05D006150 1.2e-08 62.8 58 70.7
vmacro15402 Vaccinium macrocarpon HOM05D004913 ORTHO05D006150 1.2e-08 62.8 66 57.6
AT5G43720 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 1.5e-08 62.4 59 57.6
FvH4_3g24470 Fragaria vesca HOM05D004913 ORTHO05D006150 1.5e-08 62.4 58 62.1
FAN11G1852 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.5e-08 62.4 58 62.1
FAN16G1149 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.5e-08 62.4 58 62.1
FAN21G0973 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.5e-08 62.4 58 62.1
FAN25G1200 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.5e-08 62.4 58 62.1
FAN25G2316 Fragaria x ananassa HOM05D004913 ORTHO05D006150 1.5e-08 62.4 58 62.1
BolC7t43157H Brassica oleracea HOM05D004913 ORTHO05D006150 2.0e-08 62.0 60 58.3
Haze_11271 Corylus avellana HOM05D004913 ORTHO05D006150 2.0e-08 62.0 60 63.3
Aa31LG5G3520 Aethionema arabicum HOM05D004913 ORTHO05D006150 2.6e-08 61.6 60 58.3
Ah.13g071550 Amaranthus hybridus HOM05D004913 ORTHO05D006150 2.6e-08 61.6 59 64.4
CDE07G0872 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 2.6e-08 61.6 50 64.0
QL06p015098 Quercus lobata HOM05D004913 ORTHO05D006150 2.6e-08 61.6 62 58.1
CANSAT78G1520 Cannabis sativa HOM05D004913 ORTHO05D006150 3.4e-08 61.2 57 63.2
CARHR179900 Cardamine hirsuta HOM05D004913 ORTHO05D006150 4.4e-08 60.8 59 57.6
MD16G1206200 Malus domestica HOM05D004913 ORTHO05D006150 4.4e-08 60.8 57 63.2
BcaC06g31682 Brassica carinata HOM05D004913 ORTHO05D006150 5.8e-08 60.5 60 58.3
BcaC06g34634 Brassica carinata HOM05D004913 ORTHO05D006150 5.8e-08 60.5 60 58.3
A02p27910 Brassica napus HOM05D004913 ORTHO05D006150 5.8e-08 60.5 60 61.7
C07p26280 Brassica napus HOM05D004913 ORTHO05D006150 5.8e-08 60.5 60 58.3
BraA02t07829Z Brassica rapa HOM05D004913 ORTHO05D006150 5.8e-08 60.5 60 61.7
Rhsim02G0032600 Rhododendron simsii HOM05D004913 ORTHO05D006150 5.8e-08 60.5 67 56.7
Solyc09g083270.4 Solanum lycopersicum HOM05D004913 ORTHO05D006150 5.8e-08 60.5 59 61.0
Sopen09g032190 Solanum pennellii HOM05D004913 ORTHO05D006150 5.8e-08 60.5 59 61.0
PGSC0003DMG400006092 Solanum tuberosum HOM05D004913 ORTHO05D006150 5.8e-08 60.5 59 61.0
CAN.G626.13 Capsicum annuum HOM05D004913 ORTHO05D006150 7.5e-08 60.1 61 57.4
ECA233G3913 Erigeron canadensis HOM05D004913 ORTHO05D006150 7.5e-08 60.1 62 56.5
MSTRG.21888 Avicennia marina HOM05D004913 ORTHO05D006150 9.8e-08 59.7 65 63.1
Prupe.1G027200 Prunus persica HOM05D004913 ORTHO05D006150 9.8e-08 59.7 58 63.8
BcaC03g16589 Brassica carinata HOM05D004913 ORTHO05D006150 1.3e-07 59.3 60 58.3
C02p44080 Brassica napus HOM05D004913 ORTHO05D006150 1.3e-07 59.3 60 58.3
BolC2t10451H Brassica oleracea HOM05D004913 ORTHO05D006150 1.3e-07 59.3 60 58.3
CARHR003560 Cardamine hirsuta HOM05D004913 ORTHO05D006150 1.3e-07 59.3 59 57.6
Lsat_1_v5_gn_5_67500 Lactuca sativa HOM05D004913 ORTHO05D006150 1.3e-07 59.3 62 56.5
CDE06G2453 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 2.2e-07 58.5 59 59.3
CDE07G2030 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 2.2e-07 58.5 56 57.1
SHI00581 Sapria himalayana HOM05D004913 ORTHO05D006150 2.2e-07 58.5 59 57.6
Phvul.003G138434 Phaseolus vulgaris HOM05D004913 ORTHO05D006150 3.7e-07 57.8 57 61.4
Hund17874 Selenicereus undatus HOM05D004913 ORTHO05D006150 6.4e-07 57.0 58 56.9
SGA_v2.0_scaffold101G29779 Striga asiatica HOM05D004913 ORTHO05D006150 6.4e-07 57.0 64 56.2
unitig_0.g131 Utricularia gibba HOM05D004913 ORTHO05D006150 6.4e-07 57.0 58 53.4
Lj3A719T118 Lonicera japonica HOM05D004913 ORTHO05D006150 8.3e-07 56.6 63 55.6
VMungo0720G1087 Vigna mungo HOM05D004913 ORTHO05D006150 1.1e-06 56.2 57 61.4
EL10Ac4g07493 Beta vulgaris HOM05D004913 ORTHO05D006150 1.4e-06 55.8 58 58.6
A06p47740 Brassica napus HOM05D004913 ORTHO05D006150 3.2e-06 54.7 61 57.4
BraA06t27642Z Brassica rapa HOM05D004913 ORTHO05D006150 7.0e-06 53.5 61 55.7
Glyma.10G179800 Glycine max HOM05D004913 ORTHO05D006150 7.0e-06 53.5 58 62.1


User provided reference genes

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