Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034503001 Vitis vinifera HOM05D006403 ORTHO05D008130 3.1e-179 631.7 326 100.0
Dinv41688 Davidia involucrata HOM05D006403 ORTHO05D008130 1.0e-113 414.1 262 82.4
COL.COLO4_36653 Corchorus olitorius HOM05D006403 ORTHO05D008130 2.9e-113 412.5 334 68.3
Potri.013G114500 Populus trichocarpa HOM05D006403 ORTHO05D008130 1.1e-112 410.6 325 69.2
Ciclev10001887m.g Citrus clementina HOM05D006403 ORTHO05D008130 1.6e-111 406.8 300 73.0
Duzib177G0036 Durio zibethinus HOM05D006403 ORTHO05D008130 4.7e-111 405.2 338 68.6
TAR636G1392 Trochodendron aralioides HOM05D005564 ORTHO05D008130 2.3e-110 402.9 259 79.5
Atru.chr13.1807 Acer truncatum HOM05D006403 ORTHO05D008130 1.2e-109 400.6 312 68.9
Atru.chr13.1815 Acer truncatum HOM05D006403 ORTHO05D008130 1.2e-109 400.6 312 68.9
Thecc.08G202600 Theobroma cacao HOM05D006403 ORTHO05D008130 1.2e-109 400.6 336 67.9
Gorai.013G140800 Gossypium raimondii HOM05D006403 ORTHO05D008130 4.9e-108 395.2 333 66.7
Gohir.A13G121700 Gossypium hirsutum HOM05D006403 ORTHO05D008130 6.4e-108 394.8 333 66.7
Gohir.D13G125700 Gossypium hirsutum HOM05D006403 ORTHO05D008130 8.3e-108 394.4 333 66.7
TWI32G0485 Tripterygium wilfordii HOM05D006403 ORTHO05D008130 1.8e-107 393.3 332 65.4
CSS0028864 Camellia sinensis var. sinensis HOM05D006403 ORTHO05D008130 2.0e-106 389.8 253 79.8
Rhsim08G0049700 Rhododendron simsii HOM05D006403 ORTHO05D008130 2.0e-106 389.8 258 80.2
Sc23g0004870 Simmondsia chinensis HOM05D006403 ORTHO05D008130 2.0e-106 389.8 258 78.7
Nn8g40759 Nelumbo nucifera HOM05D006403 ORTHO05D008130 1.3e-105 387.1 241 81.7
Actinidia29416 Actinidia chinensis HOM05D006403 ORTHO05D008130 5.6e-104 381.7 249 79.9
ClCG09G010420 Citrullus lanatus HOM05D006403 ORTHO05D008130 1.2e-103 380.6 328 65.5
Cfa018202 Carpinus fangiana HOM05D006403 ORTHO05D008130 3.6e-103 379.0 300 68.7
Oeu017876.2 Olea europaea HOM05D006403 ORTHO05D008130 3.6e-103 379.0 301 68.1
PGR042G3834 Punica granatum HOM05D006403 ORTHO05D008130 1.1e-102 377.5 322 66.8
MELO3C023667.2 Cucumis melo HOM05D006403 ORTHO05D008130 3.1e-102 375.9 328 64.9
Sed0020052 Sechium edule HOM05D006403 ORTHO05D008130 4.0e-102 375.6 309 65.7
Eucgr.F02626 Eucalyptus grandis HOM05D006403 ORTHO05D008130 5.2e-102 375.2 274 74.5
Lj7A297T43 Lonicera japonica HOM05D006403 ORTHO05D008130 6.8e-102 374.8 252 78.2
Haze_17907 Corylus avellana HOM05D006403 ORTHO05D008130 8.9e-102 374.4 240 79.2
AUR62023390 Chenopodium quinoa HOM05D006403 ORTHO05D008130 1.2e-101 374.0 254 76.0
Hma1.2p1_0072F.1_g038220 Hydrangea macrophylla HOM05D006403 ORTHO05D008130 1.2e-101 374.0 243 80.2
CiPaw.16G062500 Carya illinoinensis HOM05D006403 ORTHO05D008130 2.0e-101 373.2 230 82.2
AUR62013765 Chenopodium quinoa HOM05D006403 ORTHO05D008130 2.6e-101 372.9 258 74.8
Nitab4.5_0000159g0220 Nicotiana tabacum HOM05D006403 ORTHO05D008130 9.8e-101 370.9 260 73.8
Cc00_g04840 Coffea canephora HOM05D006403 ORTHO05D008130 1.3e-100 370.5 325 64.9
Manes.18G099900 Manihot esculenta HOM05D006403 ORTHO05D008130 1.3e-100 370.5 255 78.4
PGSC0003DMG400009235 Solanum tuberosum HOM05D006403 ORTHO05D008130 1.7e-100 370.2 317 65.0
CsaV3_7G024130 Cucumis sativus L. HOM05D006403 ORTHO05D008130 6.4e-100 368.2 260 75.4
Potri.019G085200 Populus trichocarpa HOM05D006403 ORTHO05D008130 6.4e-100 368.2 250 78.8
Peaxi162Scf00495g00011 Petunia axillaris HOM05D006403 ORTHO05D008130 1.4e-99 367.1 259 72.6
Solyc11g017200.2 Solanum lycopersicum HOM05D006403 ORTHO05D008130 1.9e-99 366.7 318 65.1
CANSAT78G0580 Cannabis sativa HOM05D006403 ORTHO05D008130 2.4e-99 366.3 229 80.3
Aqoxy7G00855 Aquilegia oxysepala HOM05D006403 ORTHO05D008130 3.2e-99 365.9 247 76.1
Sabra13G0096800 Salix brachista HOM05D005981 ORTHO05D008130 3.2e-99 365.9 396 56.6
Sopen11g009110 Solanum pennellii HOM05D006403 ORTHO05D008130 3.2e-99 365.9 320 64.1
Lsat_1_v5_gn_1_12940 Lactuca sativa HOM05D006403 ORTHO05D008130 5.4e-99 365.2 233 81.1
MSTRG.25437 Avicennia marina HOM05D006403 ORTHO05D008130 2.7e-98 362.8 254 75.2
Oeu000555.1 Olea europaea HOM05D006403 ORTHO05D008130 2.7e-98 362.8 252 75.4
PSO675G8117 Papaver somniferum HOM05D006403 ORTHO05D008130 2.7e-98 362.8 233 78.5
PSO732G0029 Papaver somniferum HOM05D006403 ORTHO05D008130 4.6e-98 362.1 276 69.9
CAN.G61.29 Capsicum annuum HOM05D006403 ORTHO05D008130 7.8e-98 361.3 223 81.2
Duzib116G0580 Durio zibethinus HOM05D006403 ORTHO05D008130 1.0e-97 360.9 254 74.8
MBI17_g12885_MAGBIO Magnolia biondii HOM05D006403 ORTHO05D008130 1.3e-97 360.5 355 58.9
QL02p034075 Quercus lobata HOM05D006403 ORTHO05D008130 1.3e-97 360.5 229 80.3
Hund27413 Selenicereus undatus HOM05D006403 ORTHO05D008130 1.3e-97 360.5 232 82.3
FvH4_1g29740 Fragaria vesca HOM05D006403 ORTHO05D008130 1.7e-97 360.1 320 62.5
FAN26G2688 Fragaria x ananassa HOM05D006403 ORTHO05D008130 1.7e-97 360.1 257 73.2
SGA_v2.0_scaffold24G10549 Striga asiatica HOM05D006403 ORTHO05D008130 1.7e-97 360.1 314 65.3
FAN23G0108 Fragaria x ananassa HOM05D006403 ORTHO05D008130 2.3e-97 359.8 257 72.4
FAN19G1279 Fragaria x ananassa HOM05D006403 ORTHO05D008130 3.9e-97 359.0 257 73.2
Prupe.7G018000 Prunus persica HOM05D006403 ORTHO05D008130 5.0e-97 358.6 252 73.8
EL10Ac1g00740 Beta vulgaris HOM05D006403 ORTHO05D008130 6.6e-97 358.2 258 73.3
FAN28G0939 Fragaria x ananassa HOM05D006403 ORTHO05D008130 6.6e-97 358.2 320 62.5
RcHm_v2.0_Chr3g0495761 Rosa chinensis HOM05D006403 ORTHO05D008130 1.9e-96 356.7 320 62.5
Lalb_Chr01g0010051 Lupinus albus HOM05D006403 ORTHO05D008130 3.3e-96 355.9 309 65.0
Lalb_Chr19g0129801 Lupinus albus HOM05D006403 ORTHO05D008130 5.6e-96 355.1 261 71.3
SalBow7G4031 Salvia bowleyana HOM05D006403 ORTHO05D008130 2.1e-95 353.2 226 80.1
vmacro18286 Vaccinium macrocarpon HOM05D006403 ORTHO05D008130 2.1e-95 353.2 347 59.9
AL1G36240 Arabidopsis lyrata HOM05D006403 ORTHO05D008130 4.7e-95 352.1 263 73.8
Aa31LG7G6600 Aethionema arabicum HOM05D006403 ORTHO05D008130 1.1e-94 350.9 332 62.7
arahy.Tifrunner.gnm1.ann1.RC57KJ Arachis hypogaea HOM05D006403 ORTHO05D008130 1.1e-94 350.9 277 68.6
A09p42040 Brassica napus HOM05D006403 ORTHO05D008130 1.1e-94 350.9 263 73.8
C05p21830 Brassica napus HOM05D006403 ORTHO05D008130 1.1e-94 350.9 263 73.8
ECA233G3842 Erigeron canadensis HOM05D006403 ORTHO05D008130 1.4e-94 350.5 243 74.9
BolC5t30876H Brassica oleracea HOM05D006403 ORTHO05D008130 1.8e-94 350.1 263 73.4
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 1.8e-94 350.1 288 67.0
ATR1127G194 Amborella trichopoda HOM05D006403 ORTHO05D008130 2.3e-94 349.7 232 75.9
AT1G22700 Arabidopsis thaliana HOM05D006403 ORTHO05D008130 2.3e-94 349.7 263 73.4
BraA09t39690Z Brassica rapa HOM05D006403 ORTHO05D008130 2.3e-94 349.7 263 73.8
Sp1g20210 Schrenkiella parvula HOM05D006403 ORTHO05D008130 8.9e-94 347.8 263 73.0
HanXRQChr02g0040151 Helianthus annuus HOM05D006403 ORTHO05D008130 1.2e-93 347.4 230 78.7
THA.LOC104800111 Tarenaya hassleriana HOM05D006403 ORTHO05D008130 1.5e-93 347.1 319 64.3
MD12G1013600 Malus domestica HOM05D006403 ORTHO05D008130 2.0e-93 346.7 320 61.6
Thhalv10008318m.g Eutrema salsugineum HOM05D006403 ORTHO05D008130 2.6e-93 346.3 206 85.9
arahy.Tifrunner.gnm1.ann1.3A12IQ Arachis hypogaea HOM05D006403 ORTHO05D008130 4.4e-93 345.5 276 66.7
A07p14250 Brassica napus HOM05D006403 ORTHO05D008130 4.4e-93 345.5 263 72.2
MD14G1011000 Malus domestica HOM05D006403 ORTHO05D008130 4.4e-93 345.5 267 69.7
Carub.0001s2222 Capsella rubella HOM05D006403 ORTHO05D008130 9.9e-93 344.4 206 85.4
BcaB03g14190 Brassica carinata HOM05D006403 ORTHO05D008130 2.2e-92 343.2 260 72.7
CARHR023070 Cardamine hirsuta HOM05D006403 ORTHO05D008130 8.3e-92 341.3 263 71.1
Lj5g0000123 Lotus japonicus HOM05D006403 ORTHO05D008130 1.1e-91 340.9 269 69.1
Phvul.007G090400 Phaseolus vulgaris HOM05D006403 ORTHO05D008130 1.1e-91 340.9 276 67.8
BraA07t29182Z Brassica rapa HOM05D006403 ORTHO05D008130 1.9e-91 340.1 264 70.8
C07p20970 Brassica napus HOM05D006403 ORTHO05D008130 7.1e-91 338.2 204 84.8
Glyma.20G176400 Glycine max HOM05D006403 ORTHO05D008130 7.1e-91 338.2 297 63.3
Medtr1g096230 Medicago truncatula HOM05D006403 ORTHO05D008130 1.6e-90 337.0 267 68.2
HPP92_025360 Vanilla planifolia HOM05D006403 ORTHO05D008130 8.6e-89 331.3 217 77.9
Migut.C01242 Erythranthe guttata HOM05D006403 ORTHO05D008130 3.3e-88 329.3 212 76.9
Ca_10605_v3 Cicer arietinum L. HOM05D006403 ORTHO05D008130 4.3e-88 328.9 256 67.6
Glyma.10G215300 Glycine max HOM05D006403 ORTHO05D008130 7.3e-88 328.2 273 67.0
BcaC06g34984 Brassica carinata HOM05D006403 ORTHO05D008130 1.4e-86 323.9 204 81.9
Psat6g186640 Pisum sativum HOM05D006403 ORTHO05D008130 2.4e-86 323.2 229 72.9
BolC7t42628H Brassica oleracea HOM05D006403 ORTHO05D008130 5.2e-86 322.0 268 67.9
CDE07G1616 Ceratophyllum demersum HOM05D006403 ORTHO05D008130 3.8e-84 315.8 183 85.2
Cpa.g.sc66.55 Carica papaya HOM05D006403 ORTHO05D008130 4.3e-80 302.4 166 91.6
unitig_747.g21467 Utricularia gibba HOM05D006403 ORTHO05D008130 2.2e-76 290.0 233 67.0
Os10g0460900 Oryza sativa ssp. japonica HOM05D006403 ORTHO05D008130 1.4e-75 287.3 226 67.7
Zm00001eb320270 Zea mays HOM05D006403 ORTHO05D008130 3.9e-73 279.3 212 69.3
SEGI_04324 Sequoiadendron giganteum HOM05D006403 ORTHO05D008130 5.6e-72 275.4 206 66.0
BcaB03g14188 Brassica carinata HOM05D006403 ORTHO05D008130 9.9e-69 264.6 220 68.6
AagrBONN_evm.TU.Sc2ySwM_362.2277 Anthoceros agrestis HOM05D006403 ORTHO05D008130 4.0e-62 242.7 216 57.4
TPR.G1762 Trifolium pratense HOM05D006403 ORTHO05D008130 5.3e-62 242.3 135 86.7
Pp3c2_18600 Physcomitrium patens HOM05D006403 ORTHO05D008130 1.3e-60 237.7 187 62.6
Pp3c1_20680 Physcomitrium patens HOM05D006403 ORTHO05D008130 1.0e-52 211.5 156 64.1
Mapoly0015s0041 Marchantia polymorpha HOM05D006403 ORTHO05D008130 3.2e-51 206.5 225 49.8
SMO118G0451 Selaginella moellendorffii HOM05D006403 ORTHO05D008130 3.0e-49 199.9 178 55.6
CBR_g38402 Chara braunii HOM05D006403 ORTHO05D008130 8.7e-49 198.4 182 55.5
Os10g0461100 Oryza sativa ssp. japonica HOM05D002933 ORTHO05D007742 1.1e-46 191.4 132 75.0
Cre12.g524300 Chlamydomonas reinhardtii HOM05D006403 ORTHO05D008130 3.4e-45 186.4 216 46.8
MCO16G319 Micromonas commoda HOM05D006403 ORTHO05D008130 1.7e-44 184.1 178 50.6
RcHm_v2.0_Chr7g0219671 Rosa chinensis HOM05D006403 ORTHO05D008130 1.3e-39 167.9 144 65.3
RcHm_v2.0_Chr2g0092511 Rosa chinensis HOM05D006403 ORTHO05D008130 1.2e-34 151.4 151 58.3
Hma1.2p1_0072F.1_g038240 Hydrangea macrophylla HOM05D006403 ORTHO05D228046 2.7e-26 123.6 128 58.6
PRCOL_00002033 Prasinoderma coloniale HOM05D006403 ORTHO05D008130 8.0e-26 122.1 151 40.4
RcHm_v2.0_Chr7g0199541 Rosa chinensis HOM05D006403 ORTHO05D008130 1.7e-23 114.4 65 87.7
TPR.G20530 Trifolium pratense HOM05D006403 ORTHO05D008130 1.5e-16 91.3 77 64.9
Os08g0347500 Oryza sativa ssp. japonica HOM05D002933 ORTHO05D007742 3.3e-16 90.1 53 83.0
Gohir.A12G187300 Gossypium hirsutum HOM05D005390 ORTHO05D007086 5.4e-06 56.2 134 26.1
Gohir.D12G190300 Gossypium hirsutum HOM05D005390 ORTHO05D007086 9.1e-06 55.5 134 26.1
Gorai.008G204100 Gossypium raimondii HOM05D005390 ORTHO05D007086 9.1e-06 55.5 134 26.1


User provided reference genes

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