Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 9.3e-173 610.1 316 100.0
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 4.7e-148 528.1 316 83.9
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 5.2e-147 524.6 316 82.6
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 6.7e-147 524.2 314 83.1
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 1.5e-146 523.1 316 82.6
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 1.5e-146 523.1 316 81.6
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 4.4e-146 521.5 316 82.0
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 5.7e-146 521.2 316 82.0
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 5.7e-146 521.2 312 82.7
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 7.4e-146 520.8 316 82.3
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 2.8e-145 518.8 316 82.0
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 8.2e-145 517.3 316 80.7
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 1.1e-144 516.9 316 81.6
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 2.4e-144 515.8 314 82.2
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 4.1e-144 515.0 316 80.4
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 2.6e-143 512.3 316 80.4
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 2.2e-142 509.2 314 80.6
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 6.5e-142 507.7 314 80.6
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 7.2e-141 504.2 312 82.1
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 9.4e-141 503.8 313 78.6
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 9.4e-141 503.8 314 80.3
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 9.4e-141 503.8 315 79.7
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 2.1e-140 502.7 314 79.0
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 2.7e-140 502.3 316 77.2
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 4.7e-140 501.5 314 78.7
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 8.0e-140 500.7 318 78.6
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 1.8e-139 499.6 314 76.8
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 2.3e-139 499.2 312 78.8
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 6.8e-139 497.7 315 77.8
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 1.2e-138 496.9 314 76.8
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 1.2e-138 496.9 318 78.0
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 2.0e-138 496.1 316 77.8
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 7.5e-138 494.2 315 80.3
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 9.7e-138 493.8 318 77.7
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 1.3e-137 493.4 316 77.5
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 1.7e-137 493.0 314 77.1
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 6.3e-137 491.1 314 77.4
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 1.1e-136 490.3 316 76.3
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 1.8e-136 489.6 312 76.9
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 2.4e-136 489.2 316 75.9
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 2.4e-136 489.2 314 77.1
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 5.3e-136 488.0 314 77.1
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 7.0e-136 487.6 314 78.0
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 9.1e-136 487.3 316 76.3
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 9.1e-136 487.3 299 78.6
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 1.2e-135 486.9 314 76.4
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 2.0e-135 486.1 314 74.5
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 3.5e-135 485.3 314 77.1
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 4.5e-135 485.0 314 77.1
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 4.5e-135 485.0 314 74.2
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 5.9e-135 484.6 341 72.1
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 5.9e-135 484.6 315 75.6
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 5.9e-135 484.6 311 77.5
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 1.7e-134 483.0 316 74.1
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 2.2e-134 482.6 316 76.9
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 6.5e-134 481.1 311 75.6
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 6.5e-134 481.1 313 75.1
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 6.5e-134 481.1 311 77.5
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 1.5e-133 479.9 320 75.0
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 2.5e-133 479.2 293 80.2
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 1.6e-132 476.5 311 75.6
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 2.3e-131 472.6 312 74.0
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 2.3e-131 472.6 317 73.2
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 2.3e-131 472.6 316 73.7
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 3.0e-131 472.2 312 73.7
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 5.2e-131 471.5 313 73.2
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 1.2e-130 470.3 341 70.7
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 2.0e-130 469.5 305 76.7
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 2.6e-130 469.2 311 74.6
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 3.4e-130 468.8 316 72.8
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 5.7e-130 468.0 314 73.9
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 7.5e-130 467.6 313 74.4
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 6.3e-129 464.5 313 72.2
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 5.4e-128 461.5 294 77.2
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 1.2e-127 460.3 315 70.5
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 1.6e-127 459.9 317 73.2
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 4.5e-127 458.4 315 71.7
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 5.9e-127 458.0 317 73.2
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 1.3e-126 456.8 313 70.9
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 1.3e-126 456.8 313 73.2
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 1.3e-126 456.8 317 71.0
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 1.7e-126 456.4 316 70.9
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 1.7e-126 456.4 316 70.9
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 2.9e-126 455.7 315 73.3
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 2.9e-126 455.7 316 70.6
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 5.0e-126 454.9 316 70.9
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 5.0e-126 454.9 316 70.6
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 6.6e-126 454.5 316 70.3
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 6.6e-126 454.5 329 69.6
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 6.6e-126 454.5 329 69.6
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 6.6e-126 454.5 329 69.6
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 2.5e-125 452.6 299 71.6
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 3.3e-125 452.2 286 76.6
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 7.2e-125 451.1 314 71.0
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 7.2e-125 451.1 329 68.7
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 9.5e-125 450.7 316 69.3
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 2.1e-124 449.5 316 69.9
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 4.7e-124 448.4 314 69.7
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 1.4e-123 446.8 342 67.3
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 1.8e-123 446.4 299 72.2
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 1.8e-123 446.4 329 68.1
Atru.chr8.1634 Acer truncatum HOM05D005183 ORTHO05D006684 2.3e-123 446.0 269 79.6
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 4.0e-123 445.3 299 71.9
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 4.0e-123 445.3 339 67.6
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 5.2e-123 444.9 299 71.6
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 5.2e-123 444.9 299 71.6
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 1.5e-122 443.4 314 71.0
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 4.4e-122 441.8 318 69.2
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 9.8e-122 440.7 313 70.9
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 1.7e-121 439.9 314 71.3
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 2.8e-121 439.1 257 84.0
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 6.3e-121 438.0 313 70.6
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 3.2e-120 435.6 313 70.0
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 3.5e-119 432.2 291 72.9
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 3.3e-117 425.6 329 68.7
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 8.0e-116 421.0 317 68.1
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 4.0e-115 418.7 316 67.4
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 7.8e-111 404.4 253 75.5
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 9.5e-101 370.9 314 63.7
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 2.1e-100 369.8 314 62.7
Lalb_Chr02g0155161 Lupinus albus HOM05D005183 ORTHO05D006684 2.9e-97 359.4 234 75.2
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 4.6e-95 352.1 296 59.1
Ca_28565_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 6.0e-95 351.7 223 75.8
Nitab4.5_0000132g0170 Nicotiana tabacum HOM05D005183 ORTHO05D006684 1.9e-93 346.7 228 76.3
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 2.1e-92 343.2 320 55.3
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 1.2e-87 327.4 299 54.8
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 5.1e-86 322.0 276 62.0
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 1.3e-84 317.4 313 53.4
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 5.4e-80 302.0 307 50.2
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 2.8e-76 289.7 275 54.9
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 8.4e-73 278.1 306 49.0
Oeu037537.3 Olea europaea HOM05D005183 ORTHO05D006684 2.8e-68 263.1 312 51.3
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 6.5e-65 251.9 294 48.0
PRCOL_00004600 Prasinoderma coloniale HOM05D005183 ORTHO05D006684 4.1e-51 206.1 294 42.2
HanXRQChr08g0223931 Helianthus annuus HOM05D005183 ORTHO05D006684 1.1e-48 198.0 185 59.5
Ca_11626_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 3.2e-40 169.9 111 70.3
Lalb_Chr02g0155171 Lupinus albus HOM05D005183 ORTHO05D006684 1.7e-33 147.5 93 79.6
Os05g0506900 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 6.1e-31 139.0 94 72.3
MSTRG.19230 Avicennia marina HOM05D005183 ORTHO05D026969 2.3e-30 137.1 90 74.4
MELO3C028534.2 Cucumis melo HOM05D005183 ORTHO05D006684 1.5e-24 117.9 79 73.4
TAR371G0095 Trochodendron aralioides HOM05D005183 ORTHO05D045124 1.8e-22 110.9 116 54.3
C04p39730 Brassica napus HOM05D005183 ORTHO05D026969 9.8e-21 105.1 90 64.4
BolC4t25545H Brassica oleracea HOM05D005183 ORTHO05D026969 9.8e-21 105.1 90 64.4
BolC6t35803H Brassica oleracea HOM05D005183 ORTHO05D026969 1.5e-16 91.3 90 57.8
Dinv21257 Davidia involucrata HOM05D005183 ORTHO05D045124 2.6e-13 80.5 99 52.5


User provided reference genes

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