Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033656001 Vitis vinifera HOM05D001011 ORTHO05D000851 1.8e-47 192.2 92 100.0
Duzib128G0957 Durio zibethinus HOM05D001011 ORTHO05D000851 2.3e-15 85.5 70 52.9
Cfa017632 Carpinus fangiana HOM05D001011 ORTHO05D000851 2.0e-14 82.4 70 58.6
CiPaw.01G267900 Carya illinoinensis HOM05D001011 ORTHO05D000851 2.0e-14 82.4 85 45.9
Thecc.10G085800 Theobroma cacao HOM05D001011 ORTHO05D000851 3.4e-14 81.6 86 46.5
COL.COLO4_36537 Corchorus olitorius HOM05D001011 ORTHO05D000851 4.4e-14 81.3 83 47.0
Dinv36387 Davidia involucrata HOM05D001011 ORTHO05D000851 4.4e-14 81.3 83 45.8
Dinv35796 Davidia involucrata HOM05D001011 ORTHO05D000851 1.7e-13 79.3 73 54.8
Ciclev10033705m.g Citrus clementina HOM05D001011 ORTHO05D000851 3.7e-13 78.2 83 43.4
TAR623G0634 Trochodendron aralioides HOM05D001011 ORTHO05D000851 3.7e-13 78.2 70 54.3
Haze_16746 Corylus avellana HOM05D001011 ORTHO05D000851 4.9e-13 77.8 82 42.7
MD01G1102400 Malus domestica HOM05D001011 ORTHO05D000851 6.3e-13 77.4 88 44.3
Prupe.7G128200 Prunus persica HOM05D001011 ORTHO05D000851 1.4e-12 76.3 70 58.6
CANSAT56G0914 Cannabis sativa HOM05D001011 ORTHO05D000851 3.1e-12 75.1 73 50.7
Potri.010G227800 Populus trichocarpa HOM05D001011 ORTHO05D000851 3.1e-12 75.1 70 51.4
QL07p043032 Quercus lobata HOM05D001011 ORTHO05D000851 4.1e-12 74.7 70 52.9
GSVIVG01016184001 Vitis vinifera HOM05D001011 ORTHO05D000851 4.1e-12 74.7 82 47.6
Gohir.A10G202100 Gossypium hirsutum HOM05D001011 ORTHO05D000851 7.0e-12 73.9 83 41.0
TWI53G1876 Tripterygium wilfordii HOM05D001011 ORTHO05D000851 1.6e-11 72.8 83 48.2
Duzib106G2066 Durio zibethinus HOM05D001011 ORTHO05D000851 2.0e-11 72.4 83 42.2
Oeu010013.1 Olea europaea HOM05D001011 ORTHO05D000851 2.0e-11 72.4 83 39.8
Prupe.2G208000 Prunus persica HOM05D001011 ORTHO05D000851 2.0e-11 72.4 85 43.5
CSS0001484 Camellia sinensis var. sinensis HOM05D001011 ORTHO05D000851 2.7e-11 72.0 70 51.4
Potri.008G034600 Populus trichocarpa HOM05D001011 ORTHO05D000851 2.7e-11 72.0 70 47.1
Lsat_1_v5_gn_2_108540 Lactuca sativa HOM05D001011 ORTHO05D000851 3.5e-11 71.6 70 45.7
RcHm_v2.0_Chr3g0470451 Rosa chinensis HOM05D001011 ORTHO05D000851 5.9e-11 70.9 70 54.3
Thecc.05G069100 Theobroma cacao HOM05D001011 ORTHO05D000851 5.9e-11 70.9 70 51.4
Eucgr.G02874 Eucalyptus grandis HOM05D001011 ORTHO05D000851 7.8e-11 70.5 83 38.6
COL.COLO4_09332 Corchorus olitorius HOM05D001011 ORTHO05D000851 1.0e-10 70.1 95 43.2
COL.COLO4_26942 Corchorus olitorius HOM05D001011 ORTHO05D000851 1.7e-10 69.3 70 51.4
Duzib106G1230 Durio zibethinus HOM05D001011 ORTHO05D000851 2.3e-10 68.9 70 52.9
Duzib093G1823 Durio zibethinus HOM05D001011 ORTHO05D000851 2.9e-10 68.6 86 45.3
FAN01G3080 Fragaria x ananassa HOM05D001011 ORTHO05D000851 2.9e-10 68.6 83 43.4
MELO3C009366.2 Cucumis melo HOM05D001011 ORTHO05D000851 3.8e-10 68.2 76 46.1
Gohir.D10G210300 Gossypium hirsutum HOM05D001011 ORTHO05D000851 3.8e-10 68.2 83 38.6
Gorai.011G235700 Gossypium raimondii HOM05D001011 ORTHO05D000851 3.8e-10 68.2 83 38.6
Sabra08G0023000 Salix brachista HOM05D001011 ORTHO05D000851 3.8e-10 68.2 79 43.0
MD12G1109500 Malus domestica HOM05D001011 ORTHO05D000851 5.0e-10 67.8 70 52.9
FAN06G4152 Fragaria x ananassa HOM05D001011 ORTHO05D000851 6.6e-10 67.4 83 43.4
FAN10G3513 Fragaria x ananassa HOM05D001011 ORTHO05D000851 6.6e-10 67.4 83 43.4
Manes.09G064700 Manihot esculenta HOM05D001011 ORTHO05D000851 6.6e-10 67.4 74 51.4
Actinidia34801 Actinidia chinensis HOM05D001011 ORTHO05D000851 8.6e-10 67.0 70 45.7
Nitab4.5_0008227g0010 Nicotiana tabacum HOM05D001011 ORTHO05D000851 8.6e-10 67.0 70 44.3
Oeu046640.1 Olea europaea HOM05D001011 ORTHO05D000851 8.6e-10 67.0 83 39.8
RcHm_v2.0_Chr1g0362401 Rosa chinensis HOM05D001011 ORTHO05D000851 8.6e-10 67.0 83 42.2
Actinidia38873 Actinidia chinensis HOM05D001011 ORTHO05D000851 1.1e-09 66.6 70 45.7
Sabra10G0175700 Salix brachista HOM05D001011 ORTHO05D000851 1.1e-09 66.6 86 41.9
Solyc11g008270.2 Solanum lycopersicum HOM05D001011 ORTHO05D000851 1.1e-09 66.6 70 41.4
Sopen11g004080 Solanum pennellii HOM05D001011 ORTHO05D000851 1.1e-09 66.6 70 41.4
CiPaw.09G171300 Carya illinoinensis HOM05D001011 ORTHO05D000851 1.5e-09 66.2 70 45.7
FvH4_6g16540 Fragaria vesca HOM05D001011 ORTHO05D000851 1.5e-09 66.2 70 52.9
FAN02G3602 Fragaria x ananassa HOM05D001011 ORTHO05D000851 1.5e-09 66.2 70 52.9
FAN06G4472 Fragaria x ananassa HOM05D001011 ORTHO05D000851 1.5e-09 66.2 83 43.4
FAN14G2935 Fragaria x ananassa HOM05D001011 ORTHO05D000851 1.5e-09 66.2 70 52.9
Gorai.006G162500 Gossypium raimondii HOM05D001011 ORTHO05D000851 1.5e-09 66.2 70 44.3
Gohir.D09G141600 Gossypium hirsutum HOM05D001011 ORTHO05D000851 1.9e-09 65.9 70 44.3
Nitab4.5_0001450g0170 Nicotiana tabacum HOM05D001011 ORTHO05D000851 1.9e-09 65.9 70 42.9
HanXRQChr07g0194711 Helianthus annuus HOM05D001011 ORTHO05D000851 2.5e-09 65.5 70 40.0
FvH4_7g18670 Fragaria vesca HOM05D001011 ORTHO05D000851 3.3e-09 65.1 83 42.2
Gohir.A09G145700 Gossypium hirsutum HOM05D001011 ORTHO05D000851 3.3e-09 65.1 70 50.0
MD04G1091600 Malus domestica HOM05D001011 ORTHO05D000851 3.3e-09 65.1 70 48.6
PGSC0003DMG400031067 Solanum tuberosum HOM05D001011 ORTHO05D000851 3.3e-09 65.1 70 41.4
Phvul.007G148400 Phaseolus vulgaris HOM05D001011 ORTHO05D000851 4.3e-09 64.7 70 47.1
FAN03G1901 Fragaria x ananassa HOM05D001011 ORTHO05D000851 5.6e-09 64.3 83 39.8
FAN05G4174 Fragaria x ananassa HOM05D001011 ORTHO05D000851 5.6e-09 64.3 83 42.2
FAN28G1416 Fragaria x ananassa HOM05D001011 ORTHO05D000851 5.6e-09 64.3 83 39.8
Hma1.2p1_0838F.1_g226270 Hydrangea macrophylla HOM05D001011 ORTHO05D000851 5.6e-09 64.3 88 35.2
vmacro07119 Vaccinium macrocarpon HOM05D001011 ORTHO05D000851 5.6e-09 64.3 70 47.1
Hma1.2p1_1903F.1_g307100 Hydrangea macrophylla HOM05D001011 ORTHO05D000851 7.3e-09 63.9 83 36.1
Sed0016755 Sechium edule HOM05D001011 ORTHO05D000851 7.3e-09 63.9 76 43.4
CsaV3_3G036060 Cucumis sativus L. HOM05D001011 ORTHO05D000851 1.2e-08 63.2 86 40.7
DCAR_019062 Daucus carota HOM05D001011 ORTHO05D000851 1.2e-08 63.2 80 41.2
Atru.chr12.861 Acer truncatum HOM05D001011 ORTHO05D000851 1.6e-08 62.8 83 39.8
Atru.chr8.1782 Acer truncatum HOM05D001011 ORTHO05D000851 1.6e-08 62.8 74 44.6
Actinidia06737 Actinidia chinensis HOM05D004732 ORTHO05D005424 2.8e-08 62.0 58 48.3
HanXRQChr14g0455741 Helianthus annuus HOM05D001011 ORTHO05D000851 4.7e-08 61.2 85 40.0
VMungo0720G2153 Vigna mungo HOM05D001011 ORTHO05D000851 8.0e-08 60.5 70 45.7
Rhsim03G0115500 Rhododendron simsii HOM05D001011 ORTHO05D000851 1.0e-07 60.1 70 42.9
Duzib128G0795 Durio zibethinus HOM05D001011 ORTHO05D000851 1.4e-07 59.7 70 47.1
FAN05G5155 Fragaria x ananassa HOM05D001011 ORTHO05D000851 1.4e-07 59.7 70 47.1
MSTRG.391 Avicennia marina HOM05D001011 ORTHO05D000851 2.3e-07 58.9 70 41.4
CiPaw.10G128800 Carya illinoinensis HOM05D001011 ORTHO05D000851 2.3e-07 58.9 70 47.1
ClCG10G020040 Citrullus lanatus HOM05D001011 ORTHO05D000851 2.3e-07 58.9 74 41.9
arahy.Tifrunner.gnm1.ann1.61VEI2 Arachis hypogaea HOM05D001011 ORTHO05D000851 5.2e-07 57.8 70 42.9
arahy.Tifrunner.gnm1.ann1.AI3AW5 Arachis hypogaea HOM05D001011 ORTHO05D000851 5.2e-07 57.8 70 42.9
MSTRG.27491 Avicennia marina HOM05D001011 ORTHO05D000851 5.2e-07 57.8 85 31.8
CSS0032485 Camellia sinensis var. sinensis HOM05D001011 ORTHO05D000851 5.2e-07 57.8 114 31.6
Glyma.20G183600 Glycine max HOM05D001011 ORTHO05D000851 6.8e-07 57.4 95 36.8
ECA238G4357 Erigeron canadensis HOM05D001011 ORTHO05D000851 8.9e-07 57.0 64 42.2
PSO801G0696 Papaver somniferum HOM05D001011 ORTHO05D000851 8.9e-07 57.0 71 43.7
Peaxi162Scf00145g00103 Petunia axillaris HOM05D001011 ORTHO05D000851 8.9e-07 57.0 95 32.6
arahy.Tifrunner.gnm1.ann1.BQWU45 Arachis hypogaea HOM05D001011 ORTHO05D000851 1.2e-06 56.6 91 37.4
arahy.Tifrunner.gnm1.ann1.Z7QWNS Arachis hypogaea HOM05D001011 ORTHO05D000851 1.2e-06 56.6 91 37.4
CAN.G321.52 Capsicum annuum HOM05D001011 ORTHO05D000851 2.0e-06 55.8 91 33.0
Ca_10536_v3 Cicer arietinum L. HOM05D001011 ORTHO05D000851 2.0e-06 55.8 95 35.8
Lj5g0012592 Lotus japonicus HOM05D001011 ORTHO05D000851 2.0e-06 55.8 95 35.8
PSO339G1843 Papaver somniferum HOM05D001011 ORTHO05D000851 2.0e-06 55.8 71 42.3
Migut.F01704 Erythranthe guttata HOM05D001011 ORTHO05D000851 2.6e-06 55.5 83 32.5
HanXRQChr08g0218411 Helianthus annuus HOM05D001011 ORTHO05D000851 2.6e-06 55.5 88 37.5
AT5G03440 Arabidopsis thaliana HOM05D001011 ORTHO05D000851 3.4e-06 55.1 64 37.5
Lalb_Chr02g0152041 Lupinus albus HOM05D001011 ORTHO05D000851 3.4e-06 55.1 77 39.0
MSTRG.8130 Avicennia marina HOM05D001011 ORTHO05D000851 4.4e-06 54.7 70 42.9
Cc02_g10840 Coffea canephora HOM05D001011 ORTHO05D000851 4.4e-06 54.7 91 31.9
Lalb_Chr02g0155771 Lupinus albus HOM05D001011 ORTHO05D000851 5.7e-06 54.3 63 42.9
Aa31LG1G21720 Aethionema arabicum HOM05D004402 ORTHO05D005314 7.5e-06 53.9 55 49.1
Eucgr.F00686 Eucalyptus grandis HOM05D001011 ORTHO05D191729 7.5e-06 53.9 67 38.8
Glyma.10G207200 Glycine max HOM05D001011 ORTHO05D000851 7.5e-06 53.9 95 35.8
Sed0027171 Sechium edule HOM05D001011 ORTHO05D000851 7.5e-06 53.9 83 32.5
THA.LOC109117269 Tarenaya hassleriana HOM05D001011 ORTHO05D000851 7.5e-06 53.9 78 37.2
AL6G12790 Arabidopsis lyrata HOM05D001011 ORTHO05D000851 9.8e-06 53.5 64 37.5
CARHR209900 Cardamine hirsuta HOM05D001011 ORTHO05D000851 9.8e-06 53.5 55 41.8
Pp3c15_13560 Physcomitrium patens HOM05D001011 ORTHO05D311355 9.8e-06 53.5 88 36.4


User provided reference genes

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