Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 2.1e-105 386.0 231 100.0
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 4.6e-60 235.3 146 76.7
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 2.8e-49 199.5 152 61.2
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 2.6e-47 193.0 153 62.7
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 9.9e-47 191.0 152 61.2
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 2.4e-45 186.4 151 60.3
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 1.3e-43 180.6 131 66.4
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 3.0e-43 179.5 155 57.4
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 3.0e-43 179.5 156 54.5
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 3.9e-43 179.1 151 57.0
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 1.5e-42 177.2 132 61.4
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 1.5e-42 177.2 136 64.0
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 1.5e-42 177.2 146 59.6
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 1.9e-42 176.8 151 55.6
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 3.3e-42 176.0 132 61.4
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 5.6e-42 175.3 144 58.3
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 7.3e-42 174.9 155 54.2
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 9.6e-42 174.5 149 55.7
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 1.2e-41 174.1 153 55.6
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 1.6e-41 173.7 148 56.8
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 2.8e-41 172.9 152 53.9
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 3.6e-41 172.6 139 58.3
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 4.7e-41 172.2 152 53.9
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 6.2e-41 171.8 154 54.5
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 6.2e-41 171.8 140 62.1
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 8.1e-41 171.4 142 57.7
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 1.8e-40 170.2 152 54.6
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 1.8e-40 170.2 143 57.3
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 1.8e-40 170.2 152 53.9
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 5.3e-40 168.7 137 55.5
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.5e-39 167.2 139 58.3
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 2.0e-39 166.8 139 57.6
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 2.6e-39 166.4 142 54.9
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 4.4e-39 165.6 151 55.0
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 4.4e-39 165.6 139 59.0
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 9.9e-39 164.5 131 58.8
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.3e-38 164.1 145 55.2
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 1.3e-38 164.1 141 59.6
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 1.7e-38 163.7 156 54.5
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 2.2e-38 163.3 145 51.7
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 2.2e-38 163.3 158 55.7
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 2.9e-38 162.9 140 57.1
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 3.8e-38 162.5 142 53.5
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 3.8e-38 162.5 137 58.4
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 3.8e-38 162.5 152 53.3
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 4.9e-38 162.2 131 56.5
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 6.4e-38 161.8 137 54.7
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 8.4e-38 161.4 137 54.7
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 1.1e-37 161.0 160 53.1
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 1.4e-37 160.6 142 50.7
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 2.4e-37 159.8 153 50.3
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 2.4e-37 159.8 140 53.6
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 7.1e-37 158.3 153 51.6
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.2e-36 157.5 145 53.8
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 1.2e-36 157.5 158 54.4
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 1.2e-36 157.5 149 51.0
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 1.6e-36 157.1 137 51.8
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.6e-36 157.1 154 51.3
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 4.6e-36 155.6 158 54.4
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 4.6e-36 155.6 139 55.4
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 7.8e-36 154.8 147 51.7
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 1.3e-35 154.1 155 47.7
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 3.0e-35 152.9 153 48.4
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 3.9e-35 152.5 152 50.7
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 3.9e-35 152.5 153 49.7
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 5.1e-35 152.1 153 48.4
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 8.7e-35 151.4 154 50.0
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 1.9e-34 150.2 146 50.0
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 2.5e-34 149.8 149 52.3
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 3.3e-34 149.4 145 51.0
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 7.3e-34 148.3 141 50.4
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 9.6e-34 147.9 153 48.4
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 1.3e-33 147.5 155 47.7
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 2.1e-33 146.7 138 49.3
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 2.1e-33 146.7 142 52.1
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 2.1e-33 146.7 143 52.4
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 2.8e-33 146.4 126 54.8
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 2.8e-33 146.4 140 53.6
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 3.6e-33 146.0 140 49.3
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 3.6e-33 146.0 139 49.6
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 4.8e-33 145.6 138 50.0
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 4.8e-33 145.6 113 59.3
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 4.8e-33 145.6 147 55.8
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 1.1e-32 144.4 142 51.4
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 1.1e-32 144.4 108 61.1
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 1.8e-32 143.7 160 52.5
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 2.4e-32 143.3 141 51.1
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 4.0e-32 142.5 133 53.4
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 5.3e-32 142.1 159 52.2
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 6.9e-32 141.7 139 48.9
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 9.0e-32 141.4 126 50.0
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 9.0e-32 141.4 132 52.3
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 9.0e-32 141.4 143 52.4
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 1.2e-31 141.0 141 48.2
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 3.4e-31 139.4 137 48.2
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 4.5e-31 139.0 137 48.2
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 9.9e-31 137.9 138 51.4
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 1.7e-30 137.1 126 49.2
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 1.7e-30 137.1 129 49.6
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 1.7e-30 137.1 127 48.8
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 2.2e-30 136.7 126 51.6
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 2.2e-30 136.7 126 51.6
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 2.2e-30 136.7 126 51.6
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 2.2e-30 136.7 115 57.4
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 2.9e-30 136.3 136 47.8
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 2.9e-30 136.3 110 57.3
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 3.8e-30 136.0 96 63.5
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 6.4e-30 135.2 137 52.6
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 8.4e-30 134.8 137 47.4
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 8.4e-30 134.8 136 47.8
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 1.1e-29 134.4 118 55.9
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 1.1e-29 134.4 109 52.3
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 1.4e-29 134.0 106 53.8
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 1.4e-29 134.0 137 51.8
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.4e-29 134.0 137 51.8
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 1.4e-29 134.0 141 47.5
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 1.9e-29 133.7 137 50.4
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 4.2e-29 132.5 139 45.3
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 5.4e-29 132.1 138 49.3
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 5.4e-29 132.1 138 49.3
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 5.4e-29 132.1 137 51.8
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 9.3e-29 131.3 152 45.4
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 2.1e-28 130.2 138 48.6
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 2.1e-28 130.2 138 48.6
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 2.7e-28 129.8 138 45.7
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 3.5e-28 129.4 98 59.2
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 4.6e-28 129.0 116 51.7
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 3.9e-27 125.9 116 52.6
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 1.1e-26 124.4 113 52.2
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.9e-26 123.6 149 41.6
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.5e-26 123.2 141 49.6
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 3.3e-26 122.9 113 52.2
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 4.3e-26 122.5 141 49.6
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 5.6e-26 122.1 103 51.5
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 9.6e-26 121.3 140 45.7
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 3.7e-25 119.4 94 56.4
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 6.2e-25 118.6 95 55.8
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 1.1e-24 117.9 86 64.0
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 1.1e-24 117.9 96 56.2
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 5.3e-24 115.5 95 52.6
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 9.9e-23 111.3 110 48.2
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 2.9e-22 109.8 164 39.0
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 4.9e-22 109.0 74 62.2
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 6.0e-20 102.1 71 66.2
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 7.9e-20 101.7 98 52.0
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 3.0e-19 99.8 132 42.4
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 3.9e-19 99.4 90 53.3
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 6.7e-19 98.6 99 51.5
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 1.1e-18 97.8 109 38.5
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 3.3e-18 96.3 107 44.9
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 4.3e-18 95.9 131 42.0
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 4.3e-18 95.9 91 50.5
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 7.4e-18 95.1 141 39.0
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 1.3e-17 94.4 108 40.7
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 2.1e-17 93.6 106 41.5
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 2.4e-16 90.1 105 46.7
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 9.0e-16 88.2 72 55.6
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 9.0e-16 88.2 70 55.7
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.2e-15 87.8 86 51.2
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 4.5e-15 85.9 67 58.2
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 3.8e-14 82.8 62 59.7
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 3.8e-14 82.8 51 62.7
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.1e-13 81.3 153 33.3
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 2.5e-13 80.1 88 47.7
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 9.3e-13 78.2 65 56.9
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 1.6e-12 77.4 118 39.0
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-11 73.9 110 34.5
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 3.9e-11 72.8 68 52.9
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 3.3e-10 69.7 51 54.9
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 6.3e-09 65.5 66 53.0
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 6.3e-09 65.5 65 46.2
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 1.1e-08 64.7 74 45.9
Lj1A1127T48 Lonicera japonica HOM05D003612 ORTHO05D004323 2.6e-07 60.1 42 59.5
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 7.7e-07 58.5 78 44.9
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 2.9e-06 56.6 51 51.0
Cfa015703 Carpinus fangiana HOM05D003612 ORTHO05D004323 8.5e-06 55.1 51 52.9


User provided reference genes

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