Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033244001 Vitis vinifera HOM05D003612 ORTHO05D004323 6.9e-30 133.3 65 100.0
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.5e-13 79.0 60 66.7
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 4.6e-10 67.4 65 53.8
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 6.1e-10 67.0 60 55.0
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 6.1e-10 67.0 61 54.1
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 1.0e-09 66.2 65 53.8
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 1.0e-09 66.2 65 53.8
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 1.3e-09 65.9 61 55.7
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 1.8e-09 65.5 61 50.8
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 3.9e-09 64.3 61 54.1
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 8.7e-09 63.2 58 50.0
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 8.7e-09 63.2 61 52.5
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 1.1e-08 62.8 62 53.2
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 1.1e-08 62.8 65 52.3
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 1.5e-08 62.4 63 52.4
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 1.9e-08 62.0 63 52.4
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 1.9e-08 62.0 65 50.8
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 2.5e-08 61.6 61 52.5
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 2.5e-08 61.6 64 50.0
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 3.3e-08 61.2 65 49.2
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 3.3e-08 61.2 65 49.2
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 4.3e-08 60.8 60 51.7
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 5.7e-08 60.5 54 57.4
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 9.7e-08 59.7 61 52.5
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 1.3e-07 59.3 62 48.4
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 1.3e-07 59.3 60 50.0
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.6e-07 58.9 54 55.6
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 1.6e-07 58.9 52 57.7
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.6e-07 58.9 61 47.5
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 2.2e-07 58.5 65 49.2
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 2.2e-07 58.5 61 49.2
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 2.8e-07 58.2 65 47.7
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 2.8e-07 58.2 65 49.2
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 2.8e-07 58.2 61 47.5
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 3.7e-07 57.8 57 54.4
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 3.7e-07 57.8 61 49.2
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 3.7e-07 57.8 61 49.2
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 3.7e-07 57.8 54 55.6
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 4.8e-07 57.4 60 50.0
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 4.8e-07 57.4 46 58.7
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 4.8e-07 57.4 61 45.9
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 6.3e-07 57.0 61 47.5
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 8.2e-07 56.6 57 52.6
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 8.2e-07 56.6 61 47.5
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 1.1e-06 56.2 60 50.0
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 1.1e-06 56.2 61 44.3
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 1.1e-06 56.2 59 47.5
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 1.4e-06 55.8 66 45.5
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.4e-06 55.8 64 46.9
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 1.4e-06 55.8 61 50.8
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 1.4e-06 55.8 60 50.0
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.8e-06 55.5 64 46.9
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.8e-06 55.5 61 47.5
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 2.4e-06 55.1 61 45.9
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.4e-06 55.1 61 45.9
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 2.4e-06 55.1 60 43.3
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 3.1e-06 54.7 61 45.9
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 3.1e-06 54.7 61 45.9
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 3.1e-06 54.7 61 45.9
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 3.1e-06 54.7 47 55.3
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 6.9e-06 53.5 59 44.1
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 6.9e-06 53.5 43 60.5
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 9.0e-06 53.1 65 43.1


User provided reference genes

Program Settings