Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032336001 Vitis vinifera HOM05D007280 ORTHO05D009108 1.0e-145 521.2 569 100.0
GSVIVG01010259001 Vitis vinifera HOM05D007280 ORTHO05D009108 1.1e-123 448.0 252 93.3
Aqoxy3G04194 Aquilegia oxysepala HOM05D007280 ORTHO05D009108 7.8e-69 265.8 221 60.2
TAR622G0173 Trochodendron aralioides HOM05D007280 ORTHO05D009108 6.8e-65 252.7 254 55.1
Ciclev10004581m.g Citrus clementina HOM05D007280 ORTHO05D009108 5.8e-64 249.6 253 52.2
Cpa.g.sc2.97 Carica papaya HOM05D007280 ORTHO05D009108 8.3e-63 245.7 234 54.7
Prupe.1G342100 Prunus persica HOM05D007280 ORTHO05D009108 1.1e-62 245.4 257 54.1
CiPaw.05G161600 Carya illinoinensis HOM05D007280 ORTHO05D009108 1.4e-62 245.0 225 58.2
Nn4g24834 Nelumbo nucifera HOM05D007280 ORTHO05D009108 1.4e-62 245.0 259 53.7
Manes.17G093400 Manihot esculenta HOM05D007280 ORTHO05D009108 1.9e-62 244.6 253 50.6
Potri.010G098700 Populus trichocarpa HOM05D007280 ORTHO05D009108 2.4e-62 244.2 257 51.0
VMungo1215G2162 Vigna mungo HOM05D007280 ORTHO05D009108 2.4e-62 244.2 254 52.4
Haze_01575 Corylus avellana HOM05D007280 ORTHO05D009108 1.6e-61 241.5 258 51.9
Peaxi162Scf00329g00097 Petunia axillaris HOM05D007280 ORTHO05D009108 2.1e-61 241.1 277 47.3
Hma1.2p1_0319F.1_g123900 Hydrangea macrophylla HOM05D007280 ORTHO05D009108 3.5e-61 240.4 278 51.4
Sed0008466 Sechium edule HOM05D007280 ORTHO05D009108 7.8e-61 239.2 254 51.2
ClCG01G006970 Citrullus lanatus HOM05D007280 ORTHO05D009108 1.3e-60 238.4 254 50.8
MELO3C027064.2 Cucumis melo HOM05D007280 ORTHO05D009108 1.3e-60 238.4 261 49.4
Lj3P855T51 Lonicera japonica HOM05D007280 ORTHO05D009108 1.3e-60 238.4 253 47.8
MD13G1010900 Malus domestica HOM05D007280 ORTHO05D009108 1.3e-60 238.4 260 50.8
Sabra08G0108200 Salix brachista HOM05D007280 ORTHO05D009108 1.3e-60 238.4 255 50.6
QL03p041451 Quercus lobata HOM05D007280 ORTHO05D009108 5.1e-60 236.5 254 52.8
Gorai.006G126500 Gossypium raimondii HOM05D007280 ORTHO05D009108 8.6e-60 235.7 224 51.3
Phvul.003G013000 Phaseolus vulgaris HOM05D007280 ORTHO05D009108 8.6e-60 235.7 254 50.4
Gohir.D09G108900 Gossypium hirsutum HOM05D007280 ORTHO05D009108 1.1e-59 235.3 224 51.3
TPR.G35854 Trifolium pratense HOM05D007280 ORTHO05D009108 1.1e-59 235.3 252 50.4
Glyma.20G010600 Glycine max HOM05D007280 ORTHO05D009108 1.5e-59 235.0 244 52.9
Gohir.A09G112200 Gossypium hirsutum HOM05D007280 ORTHO05D009108 1.9e-59 234.6 224 51.3
Gohir.D06G095050 Gossypium hirsutum HOM05D007280 ORTHO05D009108 1.9e-59 234.6 224 51.3
Psat6g095680 Pisum sativum HOM05D007280 ORTHO05D009108 2.5e-59 234.2 254 51.6
Cfa015100 Carpinus fangiana HOM05D007280 ORTHO05D009108 3.3e-59 233.8 258 51.2
TWI74G1184 Tripterygium wilfordii HOM05D007280 ORTHO05D009108 4.3e-59 233.4 256 50.0
MD16G1008400 Malus domestica HOM05D007280 ORTHO05D009108 1.6e-58 231.5 272 47.8
CsaV3_5G017390 Cucumis sativus L. HOM05D007280 ORTHO05D009108 2.1e-58 231.1 261 49.0
DCAR_023520 Daucus carota HOM05D007280 ORTHO05D009108 3.6e-58 230.3 259 47.9
Glyma.07G177100 Glycine max HOM05D007280 ORTHO05D009108 3.6e-58 230.3 251 49.4
Medtr1g033840 Medicago truncatula HOM05D007280 ORTHO05D009108 6.2e-58 229.6 254 50.0
Sabra10G0071200 Salix brachista HOM05D007280 ORTHO05D009108 2.3e-57 227.6 251 48.6
Ca_12458_v3 Cicer arietinum L. HOM05D007280 ORTHO05D009108 4.0e-57 226.9 257 48.2
Thecc.09G239200 Theobroma cacao HOM05D007280 ORTHO05D009108 1.2e-56 225.3 240 51.7
COL.COLO4_36459 Corchorus olitorius HOM05D007280 ORTHO05D009108 2.6e-56 224.2 222 52.3
Cc11_g02870 Coffea canephora HOM05D007280 ORTHO05D009108 9.9e-56 222.2 255 47.1
Lj2g0005518 Lotus japonicus HOM05D007280 ORTHO05D009108 9.9e-56 222.2 234 51.7
Lalb_Chr17g0338341 Lupinus albus HOM05D007280 ORTHO05D009108 4.9e-55 219.9 231 49.8
CAN.G458.1 Capsicum annuum HOM05D007280 ORTHO05D009108 8.3e-55 219.2 234 48.7
PSO782G1316 Papaver somniferum HOM05D007280 ORTHO05D009108 2.4e-54 217.6 232 47.8
PGSC0003DMG400031369 Solanum tuberosum HOM05D007280 ORTHO05D009108 1.6e-53 214.9 238 47.9
Sopen04g003730 Solanum pennellii HOM05D007280 ORTHO05D009108 3.5e-53 213.8 238 46.6
PSO063G1027 Papaver somniferum HOM05D007280 ORTHO05D009108 4.6e-53 213.4 261 44.8
Potri.008G142900 Populus trichocarpa HOM05D007280 ORTHO05D009108 4.6e-53 213.4 238 48.3
Lsat_1_v5_gn_4_26101 Lactuca sativa HOM05D007280 ORTHO05D009108 2.3e-52 211.1 251 44.2
Sabra08G0108600 Salix brachista HOM05D007280 ORTHO05D009108 2.3e-52 211.1 233 51.5
Solyc04g008570.4 Solanum lycopersicum HOM05D007280 ORTHO05D009108 1.1e-51 208.8 238 45.8
Rhsim04G0168900 Rhododendron simsii HOM05D007280 ORTHO05D009108 1.5e-51 208.4 249 47.8
FAN12G0470 Fragaria x ananassa HOM05D007280 ORTHO05D009108 2.5e-51 207.6 252 46.0
Dinv17118 Davidia involucrata HOM05D007280 ORTHO05D009108 2.8e-50 204.1 201 52.7
FvH4_4g36140 Fragaria vesca HOM05D007280 ORTHO05D009108 2.8e-50 204.1 252 45.2
FAN07G2371 Fragaria x ananassa HOM05D007280 ORTHO05D009108 3.6e-50 203.8 252 45.2
HanXRQChr16g0526501 Helianthus annuus HOM05D007280 ORTHO05D009108 1.8e-49 201.4 235 44.3
CSS0013384 Camellia sinensis var. sinensis HOM05D007280 ORTHO05D009108 8.9e-49 199.1 270 43.0
SalBow3G1417 Salvia bowleyana HOM05D007280 ORTHO05D009108 4.4e-48 196.8 260 42.3
Eucgr.B02618 Eucalyptus grandis HOM05D007280 ORTHO05D009108 5.8e-48 196.4 237 45.1
CDE04G3512 Ceratophyllum demersum HOM05D007280 ORTHO05D009108 2.2e-47 194.5 204 51.5
ATR0705G126 Amborella trichopoda HOM05D007280 ORTHO05D009108 6.4e-47 193.0 242 43.0
Duzib168G0083 Durio zibethinus HOM05D007280 ORTHO05D009108 8.4e-47 192.6 232 44.8
Oeu006355.1 Olea europaea HOM05D007280 ORTHO05D009108 1.9e-46 191.4 235 43.8
Migut.N02514 Erythranthe guttata HOM05D007280 ORTHO05D009108 6.0e-45 186.4 251 43.0
MSTRG.17728 Avicennia marina HOM05D007280 ORTHO05D009108 1.0e-44 185.7 270 41.1
Aa31sc65G20 Aethionema arabicum HOM05D007280 ORTHO05D009108 3.3e-43 180.6 240 43.8
CDE08G0845 Ceratophyllum demersum HOM05D007280 ORTHO05D009108 1.2e-42 178.7 234 44.9
PGR044G2110 Punica granatum HOM05D007280 ORTHO05D009108 8.1e-42 176.0 248 42.3
THA.LOC104819105 Tarenaya hassleriana HOM05D007280 ORTHO05D009108 1.8e-41 174.9 240 42.1
ECA246G2688 Erigeron canadensis HOM05D007280 ORTHO05D009108 3.4e-40 170.6 247 38.5
Thhalv10016019m.g Eutrema salsugineum HOM05D007280 ORTHO05D009108 9.9e-40 169.1 235 43.4
Lsat_1_v5_gn_3_27640 Lactuca sativa HOM05D007280 ORTHO05D009108 6.4e-39 166.4 253 37.9
Sp6g30250 Schrenkiella parvula HOM05D007280 ORTHO05D009108 4.2e-38 163.7 235 42.1
AL6G24390 Arabidopsis lyrata HOM05D007280 ORTHO05D009108 5.4e-38 163.3 237 42.2
A02p02170 Brassica napus HOM05D007280 ORTHO05D009108 7.1e-38 162.9 256 39.5
AT5G13770 Arabidopsis thaliana HOM05D007280 ORTHO05D009108 9.3e-38 162.5 237 42.2
BraA02t05191Z Brassica rapa HOM05D007280 ORTHO05D009108 1.2e-37 162.2 256 39.1
C02p06420 Brassica napus HOM05D007280 ORTHO05D009108 2.3e-36 157.9 257 38.5
BolC2t06588H Brassica oleracea HOM05D007280 ORTHO05D009108 2.3e-36 157.9 257 38.5
Carub.0006s1195 Capsella rubella HOM05D007280 ORTHO05D009108 3.9e-36 157.1 239 40.2
CARHR199670 Cardamine hirsuta HOM05D007280 ORTHO05D009108 3.3e-35 154.1 210 43.3
Ah.13g070140 Amaranthus hybridus HOM05D007280 ORTHO05D009108 5.6e-35 153.3 235 37.4
BcaNung04186 Brassica carinata HOM05D007280 ORTHO05D009108 2.6e-32 144.4 235 38.3
Ciclev10006779m.g Citrus clementina HOM05D007280 ORTHO05D009108 3.8e-31 140.6 102 70.6
MBI03_g37599_MAGBIO Magnolia biondii HOM05D007280 ORTHO05D009108 1.4e-30 138.7 195 41.5
Nitab4.5_0000129g0410 Nicotiana tabacum HOM05D007280 ORTHO05D009108 1.8e-28 131.7 102 65.7
Sc14g0006690 Simmondsia chinensis HOM05D007280 ORTHO05D009108 3.0e-28 131.0 157 45.9
Os04g0583101 Oryza sativa ssp. japonica HOM05D007280 ORTHO05D009108 6.7e-28 129.8 242 33.1
Nitab4.5_0003882g0050 Nicotiana tabacum HOM05D007280 ORTHO05D009108 2.5e-27 127.9 102 63.7
QL11p025101 Quercus lobata HOM05D007280 ORTHO05D009108 4.8e-26 123.6 103 64.1
Zm00001eb072910 Zea mays HOM05D007280 ORTHO05D009108 1.8e-25 121.7 242 31.8
AUR62006107 Chenopodium quinoa HOM05D007280 ORTHO05D009108 9.9e-24 115.9 255 29.4
AUR62019383 Chenopodium quinoa HOM05D007280 ORTHO05D009108 1.3e-23 115.5 255 28.2
QL11p025168 Quercus lobata HOM05D007280 ORTHO05D009108 1.6e-21 108.6 106 52.8
RcHm_v2.0_Chr4g0445881 Rosa chinensis HOM05D007280 ORTHO05D009108 4.6e-21 107.1 221 34.8
Ah.07g205740 Amaranthus hybridus HOM05D007280 ORTHO05D009108 5.1e-20 103.6 250 27.2
SalBow3G4579 Salvia bowleyana HOM05D007280 ORTHO05D009108 6.9e-09 66.6 77 42.9
Cpa.g.sc8.109 Carica papaya HOM05D007486 ORTHO05D003673 5.0e-07 60.5 131 28.2
ECA234G4111 Erigeron canadensis HOM05D007280 ORTHO05D009108 6.5e-07 60.1 35 74.3
Potri.011G057900 Populus trichocarpa HOM05D002986 ORTHO05D007611 8.5e-07 59.7 197 25.9
FAN22G2182 Fragaria x ananassa HOM05D007280 ORTHO05D009108 2.5e-06 58.2 34 76.5
PSO017G6569 Papaver somniferum HOM05D007486 ORTHO05D003673 7.2e-06 56.6 183 26.2
A07p07090 Brassica napus HOM05D007486 ORTHO05D003673 9.4e-06 56.2 139 25.9
Sabra11G0040100 Salix brachista HOM05D002986 ORTHO05D007611 9.4e-06 56.2 197 24.9


User provided reference genes

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