Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 0.0e+00 1114.4 646 100.0
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 7.8e-142 508.4 654 46.5
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 6.9e-130 468.8 654 44.5
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 2.6e-129 466.8 655 45.3
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 2.2e-128 463.8 707 45.1
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 5.4e-127 459.1 654 43.9
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.2e-126 458.0 655 44.9
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 3.5e-126 456.4 549 49.2
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 1.6e-123 447.6 626 46.5
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 3.1e-122 443.4 653 45.2
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 3.1e-122 443.4 655 42.1
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 2.0e-121 440.7 655 44.6
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 2.6e-121 440.3 606 48.7
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.9e-119 434.1 655 42.6
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 5.1e-117 426.0 655 41.5
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 1.1e-116 424.9 634 47.9
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 4.3e-116 422.9 655 41.4
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 5.6e-116 422.5 610 45.1
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 9.6e-116 421.8 655 41.2
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 5.8e-113 412.5 646 40.7
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 1.4e-111 407.9 652 41.1
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 9.3e-111 405.2 633 41.1
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.8e-109 401.0 633 40.8
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 3.9e-109 399.8 698 39.1
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 4.8e-107 392.9 315 66.0
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 6.3e-107 392.5 572 44.6
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 6.3e-107 392.5 708 38.1
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 6.3e-107 392.5 602 45.0
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 1.8e-106 391.0 598 42.1
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 4.1e-106 389.8 702 38.0
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 5.3e-106 389.4 703 41.3
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 9.0e-106 388.7 649 39.6
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 5.9e-105 386.0 642 47.2
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 2.2e-104 384.0 703 37.4
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 6.5e-104 382.5 553 42.5
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 6.5e-104 382.5 703 37.3
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.5e-103 379.4 647 40.8
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 2.1e-102 377.5 718 37.7
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 6.1e-102 375.9 655 38.9
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 7.9e-102 375.6 416 56.0
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 3.9e-101 373.2 701 36.9
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 1.5e-100 371.3 558 42.1
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 2.5e-100 370.5 707 36.9
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 7.4e-100 369.0 646 39.0
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 1.8e-98 364.4 620 43.2
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 4.1e-98 363.2 580 42.2
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 6.9e-98 362.5 635 38.7
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.5e-95 352.8 620 42.4
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 9.4e-95 352.1 633 39.3
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 7.9e-94 349.0 591 40.6
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 3.9e-93 346.7 576 40.8
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 6.7e-93 345.9 708 36.3
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 2.0e-92 344.4 697 35.9
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 1.3e-91 341.7 694 36.2
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 1.3e-91 341.7 424 54.2
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 1.3e-91 341.7 717 36.4
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 2.8e-91 340.5 560 40.9
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.8e-90 337.8 637 38.1
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 5.3e-90 336.3 704 36.2
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.3e-88 331.6 568 40.7
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 4.2e-87 326.6 314 55.4
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 1.8e-85 321.2 637 36.4
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 1.8e-85 321.2 411 45.7
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.3e-85 320.9 423 50.6
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 1.1e-84 318.5 630 37.1
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.1e-84 318.5 592 37.8
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.0e-84 317.8 654 35.3
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 4.4e-84 316.6 659 34.7
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 1.7e-83 314.7 258 64.3
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.8e-83 313.9 677 43.0
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 1.8e-82 311.2 342 52.0
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 1.8e-82 311.2 617 39.1
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 7.0e-82 309.3 608 37.2
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.6e-81 308.1 391 51.2
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 8.5e-80 302.4 575 38.6
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 1.5e-79 301.6 678 37.3
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 5.5e-79 299.7 584 37.2
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 9.4e-79 298.9 612 36.3
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 1.6e-78 298.1 618 35.3
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 1.0e-77 295.4 612 37.6
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 1.4e-77 295.0 623 36.9
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 8.8e-77 292.4 618 38.8
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 3.3e-76 290.4 581 36.5
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 3.7e-75 287.0 599 36.1
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 4.8e-75 286.6 609 36.6
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 8.2e-75 285.8 599 35.9
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 8.2e-75 285.8 564 36.9
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 1.4e-74 285.0 592 36.8
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 1.4e-74 285.0 557 36.8
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 1.8e-74 284.6 578 36.0
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 1.9e-71 274.6 585 35.0
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 1.9e-71 274.6 602 39.5
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 1.9e-71 274.6 602 39.5
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 1.9e-71 274.6 602 39.5
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 3.0e-69 267.3 569 36.7
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 2.0e-68 264.6 250 58.0
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 4.4e-68 263.5 547 35.1
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 2.2e-67 261.2 533 38.6
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 4.5e-65 253.4 546 36.1
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 5.9e-65 253.1 703 31.0
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 2.2e-59 234.6 309 46.6
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 3.3e-55 220.7 240 53.8
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 9.5e-55 219.2 642 32.4
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 4.4e-52 210.3 127 76.4
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 4.4e-52 210.3 200 57.5
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 1.0e-48 199.1 487 33.9
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.7e-48 198.4 479 34.0
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 4.0e-45 187.2 422 35.1
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 8.9e-45 186.0 144 64.6
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 6.6e-40 169.9 442 33.3
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 1.5e-36 158.7 405 33.3
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 2.2e-35 154.8 683 31.6
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 2.7e-25 121.3 193 40.9
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 7.8e-25 119.8 337 32.9
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 3.6e-22 110.9 81 63.0
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 1.1e-21 109.4 197 38.1
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 5.2e-21 107.1 174 40.8
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 6.9e-21 106.7 97 58.8
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 1.3e-19 102.4 104 54.8
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 2.9e-19 101.3 272 32.7
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 1.3e-11 75.9 150 36.0
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 1.3e-11 75.9 98 43.9
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 4.9e-11 73.9 279 26.9
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 1.6e-09 68.9 101 36.6
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 2.1e-09 68.6 266 26.7
HPP92_006144 Vanilla planifolia HOM05D002569 ORTHO05D006728 1.9e-07 62.0 304 24.7
CBR_g41780 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-06 57.8 48 62.5


User provided reference genes

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