Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 1.6e-183 646.0 330 100.0
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 1.7e-140 503.1 358 74.3
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 7.8e-138 494.2 355 74.1
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 5.1e-137 491.5 355 74.1
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 1.5e-136 490.0 355 72.7
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 9.5e-136 487.3 355 73.0
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 2.3e-134 482.6 355 72.1
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 7.5e-133 477.6 357 72.0
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 4.9e-132 474.9 354 72.9
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 6.4e-132 474.6 353 72.0
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 3.5e-130 468.8 359 70.5
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 1.7e-129 466.5 351 71.2
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 8.6e-129 464.2 334 73.4
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 1.5e-128 463.4 354 72.0
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 3.3e-128 462.2 358 72.1
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 6.2e-127 458.0 332 74.1
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 6.2e-127 458.0 355 67.9
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 8.1e-127 457.6 356 69.7
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 3.4e-125 452.2 356 68.3
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 5.8e-125 451.4 357 68.1
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 7.6e-125 451.1 357 67.5
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 2.2e-124 449.5 353 68.0
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 2.2e-124 449.5 352 68.2
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 3.8e-124 448.7 355 67.6
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 4.9e-124 448.4 318 74.8
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 4.9e-124 448.4 317 75.4
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 4.2e-123 445.3 351 68.7
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 5.4e-123 444.9 362 68.0
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 5.4e-123 444.9 357 67.2
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 5.4e-123 444.9 356 67.7
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 7.1e-123 444.5 353 69.4
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 9.2e-123 444.1 356 67.1
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 1.2e-122 443.7 341 71.3
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.2e-122 443.7 355 67.3
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 1.2e-122 443.7 356 67.1
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 2.1e-122 443.0 317 74.4
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 2.1e-122 443.0 362 67.4
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 3.5e-122 442.2 336 70.5
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 7.8e-122 441.0 357 66.7
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 1.3e-121 440.3 360 66.9
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 3.0e-121 439.1 368 65.8
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 3.0e-121 439.1 343 71.1
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 3.9e-121 438.7 352 67.9
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 6.6e-121 438.0 360 67.8
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 1.1e-120 437.2 306 74.8
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 1.1e-120 437.2 306 74.8
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 1.1e-120 437.2 352 68.5
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.5e-120 436.8 355 68.5
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 1.9e-120 436.4 355 66.2
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 2.5e-120 436.0 352 67.6
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 2.5e-120 436.0 363 66.9
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 4.3e-120 435.3 355 66.8
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 5.6e-120 434.9 352 67.6
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 7.3e-120 434.5 352 67.3
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 1.3e-119 433.7 355 67.3
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 1.6e-119 433.3 336 69.6
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 2.1e-119 433.0 354 66.1
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 2.8e-119 432.6 353 67.7
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 4.8e-119 431.8 352 67.6
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 1.4e-118 430.3 355 67.3
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 1.4e-118 430.3 369 64.8
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 4.0e-118 428.7 345 66.4
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 4.0e-118 428.7 357 66.9
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 5.3e-118 428.3 348 66.7
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 1.2e-117 427.2 355 67.9
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 9.9e-117 424.1 355 64.2
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 1.7e-116 423.3 348 67.0
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 3.8e-116 422.2 332 70.2
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 4.9e-116 421.8 358 65.4
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 4.9e-116 421.8 309 73.5
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 6.4e-116 421.4 351 65.8
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 1.1e-115 420.6 302 75.8
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 1.4e-115 420.2 364 62.9
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 1.9e-115 419.9 360 66.4
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 2.4e-115 419.5 361 63.4
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 4.2e-115 418.7 355 63.9
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 4.2e-115 418.7 362 65.7
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 7.1e-115 417.9 302 72.2
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 9.3e-115 417.5 331 69.2
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 1.3e-113 413.7 359 62.1
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.3e-113 413.7 353 66.0
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 8.7e-113 411.0 322 67.7
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 1.9e-112 409.8 312 71.8
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 2.5e-112 409.5 357 62.5
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 2.5e-112 409.5 354 62.4
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 9.6e-112 407.5 318 68.9
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 8.1e-111 404.4 354 63.0
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 2.4e-110 402.9 323 67.2
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 2.4e-110 402.9 352 63.4
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 6.9e-110 401.4 328 65.9
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 6.9e-110 401.4 352 63.1
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 2.0e-109 399.8 318 67.0
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 2.0e-109 399.8 318 67.0
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 3.4e-109 399.1 323 66.9
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 4.5e-109 398.7 318 66.7
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 7.6e-109 397.9 323 66.9
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 9.9e-109 397.5 324 67.3
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 1.7e-108 396.7 262 79.0
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 2.2e-108 396.4 318 67.9
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 2.2e-108 396.4 362 63.5
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 4.9e-108 395.2 298 71.5
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 9.3e-107 391.0 352 63.1
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 2.1e-106 389.8 291 70.8
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 4.6e-106 388.7 343 61.8
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 1.0e-105 387.5 352 62.2
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 3.0e-105 386.0 292 69.9
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 1.6e-103 380.2 297 68.7
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 6.2e-103 378.3 326 65.0
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 2.0e-101 373.2 356 62.1
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 7.1e-99 364.8 300 66.7
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 1.5e-93 347.1 280 66.4
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 1.0e-92 344.4 263 68.4
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 3.2e-91 339.3 333 60.4
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 7.1e-91 338.2 285 66.0
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 1.3e-89 334.0 303 60.4
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 6.7e-89 331.6 260 68.1
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 9.7e-88 327.8 258 67.1
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 1.3e-87 327.4 257 67.7
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 4.6e-82 308.9 326 58.0
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 6.1e-82 308.5 245 69.8
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 7.2e-75 285.0 252 59.5
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 1.8e-70 270.4 256 56.6
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 5.5e-67 258.8 177 81.9
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 9.7e-64 248.1 311 50.5
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 2.0e-61 240.4 162 79.6
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 1.0e-60 238.0 275 48.7
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 7.7e-53 211.8 172 62.8
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 3.8e-52 209.5 156 70.5
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 2.1e-42 177.2 103 89.3
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 1.1e-35 154.8 103 79.6
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 1.1e-35 154.8 103 79.6
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 1.5e-32 144.4 208 46.6
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 1.1e-30 138.3 103 66.0
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 3.9e-20 103.2 62 83.9
Actinidia29179 Actinidia chinensis HOM05D005591 ORTHO05D007131 3.3e-19 100.1 225 34.7
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 3.6e-10 70.1 43 74.4
Ca_28569_v3 Cicer arietinum L. HOM05D005591 ORTHO05D149412 3.1e-09 67.0 192 26.0


User provided reference genes

Program Settings