Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031602001 Vitis vinifera HOM05D000119 ORTHO05D000054 6.8e-139 497.3 245 100.0
GSVIVG01003156001 Vitis vinifera HOM05D000119 ORTHO05D000054 1.0e-49 201.1 149 67.8
TAR625G0796 Trochodendron aralioides HOM05D000119 ORTHO05D000054 4.3e-16 89.4 187 35.8
TAR381G0837 Trochodendron aralioides HOM05D000119 ORTHO05D000054 9.6e-16 88.2 189 33.9
Cpa.g.sc6.98 Carica papaya HOM05D000119 ORTHO05D000054 3.4e-13 79.7 90 47.8
Prupe.8G134900 Prunus persica HOM05D000119 ORTHO05D000054 1.7e-12 77.4 176 31.2
Lj4P765T20 Lonicera japonica HOM05D000119 ORTHO05D000054 4.9e-12 75.9 116 43.1
CsaV3_6G043570 Cucumis sativus L. HOM05D000119 ORTHO05D000054 1.4e-11 74.3 83 48.2
CARHR280310 Cardamine hirsuta HOM05D000119 ORTHO05D000054 3.2e-11 73.2 95 47.4
Manes.13G118400 Manihot esculenta HOM05D000119 ORTHO05D000054 3.2e-11 73.2 85 44.7
Thhalv10004676m.g Eutrema salsugineum HOM05D000119 ORTHO05D000054 4.2e-11 72.8 117 41.0
MELO3C007586.2 Cucumis melo HOM05D000119 ORTHO05D000054 5.4e-11 72.4 83 47.0
Potri.007G048900 Populus trichocarpa HOM05D000119 ORTHO05D000054 5.4e-11 72.4 114 38.6
Manes.12G108500 Manihot esculenta HOM05D000119 ORTHO05D000054 1.6e-10 70.9 86 43.0
Lsat_1_v5_gn_3_88960 Lactuca sativa HOM05D000119 ORTHO05D000054 2.1e-10 70.5 95 42.1
Ca_24738_v3 Cicer arietinum L. HOM05D000119 ORTHO05D000054 2.7e-10 70.1 101 39.6
Nn1g04702 Nelumbo nucifera HOM05D000119 ORTHO05D000054 4.6e-10 69.3 123 38.2
MD05G1089600 Malus domestica HOM05D000119 ORTHO05D000054 6.0e-10 68.9 183 32.2
MSTRG.23713 Avicennia marina HOM05D000119 ORTHO05D000054 7.8e-10 68.6 91 44.0
Sp2g29360 Schrenkiella parvula HOM05D000119 ORTHO05D000054 7.8e-10 68.6 94 46.8
AT5G67300 Arabidopsis thaliana HOM05D000119 ORTHO05D000054 1.0e-09 68.2 95 46.3
CDE04G2409 Ceratophyllum demersum HOM05D000119 ORTHO05D000054 1.0e-09 68.2 90 42.2
Dinv39266 Davidia involucrata HOM05D000119 ORTHO05D000054 1.0e-09 68.2 107 38.3
CSS0005646 Camellia sinensis var. sinensis HOM05D000119 ORTHO05D000054 1.3e-09 67.8 91 42.9
TWI53G0631 Tripterygium wilfordii HOM05D000119 ORTHO05D000054 1.3e-09 67.8 86 46.5
MSTRG.3444 Avicennia marina HOM05D000119 ORTHO05D000054 1.7e-09 67.4 94 44.7
CiPaw.16G037400 Carya illinoinensis HOM05D000119 ORTHO05D000054 1.7e-09 67.4 90 40.0
THA.LOC104827448 Tarenaya hassleriana HOM05D000119 ORTHO05D000054 1.7e-09 67.4 117 41.9
Aqoxy5G01144 Aquilegia oxysepala HOM05D000119 ORTHO05D000054 2.3e-09 67.0 89 51.7
Dinv35919 Davidia involucrata HOM05D000119 ORTHO05D000054 2.3e-09 67.0 110 36.4
Glyma.01G190100 Glycine max HOM05D000119 ORTHO05D000054 2.3e-09 67.0 103 35.0
ATR0691G274 Amborella trichopoda HOM05D000119 ORTHO05D000054 3.0e-09 66.6 85 49.4
Carub.0008s2720 Capsella rubella HOM05D000119 ORTHO05D000054 3.0e-09 66.6 95 44.2
Cpa.g.sc21.145 Carica papaya HOM05D000119 ORTHO05D000054 3.0e-09 66.6 179 32.4
ClCG01G017090 Citrullus lanatus HOM05D000119 ORTHO05D000054 3.0e-09 66.6 82 45.1
CDE04G2231 Ceratophyllum demersum HOM05D000119 ORTHO05D000054 5.1e-09 65.9 86 45.3
Actinidia12018 Actinidia chinensis HOM05D000119 ORTHO05D000054 6.6e-09 65.5 95 40.0
Cc07_g06450 Coffea canephora HOM05D000119 ORTHO05D000054 6.6e-09 65.5 91 40.7
Gohir.D11G203400 Gossypium hirsutum HOM05D000119 ORTHO05D000054 6.6e-09 65.5 74 43.2
Gorai.007G218100 Gossypium raimondii HOM05D000119 ORTHO05D000054 6.6e-09 65.5 74 43.2
GSVIVG01009424001 Vitis vinifera HOM05D000119 ORTHO05D000054 6.6e-09 65.5 151 33.1
Actinidia36462 Actinidia chinensis HOM05D000119 ORTHO05D000054 8.7e-09 65.1 92 38.0
Nn5g30421 Nelumbo nucifera HOM05D000119 ORTHO05D000054 1.1e-08 64.7 83 44.6
A07p16650 Brassica napus HOM05D000119 ORTHO05D000054 1.5e-08 64.3 94 42.6
BolC7t42960H Brassica oleracea HOM05D000119 ORTHO05D000054 1.5e-08 64.3 94 43.6
Gohir.A11G220200 Gossypium hirsutum HOM05D000119 ORTHO05D000054 1.5e-08 64.3 74 43.2
THA.LOC104819247 Tarenaya hassleriana HOM05D000119 ORTHO05D000054 1.5e-08 64.3 98 42.9
BcaB02g09952 Brassica carinata HOM05D000119 ORTHO05D000054 1.9e-08 63.9 94 42.6
BcaC06g34815 Brassica carinata HOM05D000119 ORTHO05D000054 1.9e-08 63.9 94 43.6
C02p64560 Brassica napus HOM05D000119 ORTHO05D000054 1.9e-08 63.9 86 47.7
C07p24380 Brassica napus HOM05D000119 ORTHO05D000054 1.9e-08 63.9 94 43.6
BraA07t29388Z Brassica rapa HOM05D000119 ORTHO05D000054 2.5e-08 63.5 94 42.6
Ciclev10026107m.g Citrus clementina HOM05D000119 ORTHO05D000054 2.5e-08 63.5 85 47.1
TWI09G1597 Tripterygium wilfordii HOM05D000119 ORTHO05D000054 2.5e-08 63.5 126 37.3
Atru.chr3.250 Acer truncatum HOM05D000119 ORTHO05D000054 3.3e-08 63.2 89 43.8
BolC2t12520H Brassica oleracea HOM05D000119 ORTHO05D000054 3.3e-08 63.2 86 47.7
COL.COLO4_11484 Corchorus olitorius HOM05D000119 ORTHO05D000054 3.3e-08 63.2 74 45.9
Gohir.D11G051200 Gossypium hirsutum HOM05D000119 ORTHO05D000054 3.3e-08 63.2 77 42.9
Gorai.007G055600 Gossypium raimondii HOM05D000119 ORTHO05D000054 3.3e-08 63.2 77 42.9
CiPaw.15G051600 Carya illinoinensis HOM05D000119 ORTHO05D000054 4.3e-08 62.8 97 37.1
Duzib147G0851 Durio zibethinus HOM05D000119 ORTHO05D000054 4.3e-08 62.8 74 41.9
Gohir.A11G047600 Gossypium hirsutum HOM05D000119 ORTHO05D000054 4.3e-08 62.8 77 42.9
Dinv15764 Davidia involucrata HOM05D000119 ORTHO05D000054 5.6e-08 62.4 121 37.2
MD02G1179000 Malus domestica HOM05D000119 ORTHO05D000054 5.6e-08 62.4 100 40.0
Sabra07G0043600 Salix brachista HOM05D000119 ORTHO05D000054 5.6e-08 62.4 115 36.5
SGA_v2.0_scaffold15G07370 Striga asiatica HOM05D000119 ORTHO05D000054 7.3e-08 62.0 86 43.0
Thecc.01G063400 Theobroma cacao HOM05D000119 ORTHO05D000054 7.3e-08 62.0 78 41.0
Prupe.1G430000 Prunus persica HOM05D000119 ORTHO05D000054 9.6e-08 61.6 81 44.4
Aa31LG7G13690 Aethionema arabicum HOM05D000119 ORTHO05D000054 1.3e-07 61.2 80 40.0
CDE06G0753 Ceratophyllum demersum HOM05D000119 ORTHO05D000054 1.3e-07 61.2 82 45.1
MELO3C024799.2 Cucumis melo HOM05D000119 ORTHO05D000054 1.3e-07 61.2 71 50.7
HanXRQChr14g0449721 Helianthus annuus HOM05D000119 ORTHO05D000054 1.3e-07 61.2 85 42.4
ECA246G0316 Erigeron canadensis HOM05D000119 ORTHO05D000054 1.6e-07 60.8 91 40.7
FAN26G0551 Fragaria x ananassa HOM05D000119 ORTHO05D000054 1.6e-07 60.8 89 39.3
Nitab4.5_0001373g0030 Nicotiana tabacum HOM05D000119 ORTHO05D000054 1.6e-07 60.8 95 37.9
Phvul.002G015100 Phaseolus vulgaris HOM05D000119 ORTHO05D000054 1.6e-07 60.8 127 35.4
Potri.002G122600 Populus trichocarpa HOM05D000119 ORTHO05D000054 1.6e-07 60.8 92 41.3
QL02p003821 Quercus lobata HOM05D000119 ORTHO05D000054 2.1e-07 60.5 91 40.7
QL93p0100_0275 Quercus lobata HOM05D000119 ORTHO05D000054 2.1e-07 60.5 91 40.7
CiPaw.05G011500 Carya illinoinensis HOM05D000119 ORTHO05D000054 2.8e-07 60.1 134 34.3
Glyma.11G052100 Glycine max HOM05D000119 ORTHO05D000054 2.8e-07 60.1 97 39.2
FAN19G1055 Fragaria x ananassa HOM05D000119 ORTHO05D000054 3.6e-07 59.7 90 38.9
Hma1.2p1_0239F.1_g100050 Hydrangea macrophylla HOM05D000119 ORTHO05D000054 3.6e-07 59.7 125 34.4
Nitab4.5_0002578g0010 Nicotiana tabacum HOM05D000119 ORTHO05D000054 3.6e-07 59.7 95 37.9
Sabra02G0096000 Salix brachista HOM05D000119 ORTHO05D000054 3.6e-07 59.7 93 40.9
Sed0021608 Sechium edule HOM05D000119 ORTHO05D000054 3.6e-07 59.7 82 43.9
THA.LOC104807600 Tarenaya hassleriana HOM05D000119 ORTHO05D000054 3.6e-07 59.7 85 44.7
Manes.05G177900 Manihot esculenta HOM05D000119 ORTHO05D000054 4.8e-07 59.3 85 42.4
ClCG02G008090 Citrullus lanatus HOM05D000119 ORTHO05D000054 6.2e-07 58.9 90 44.4
Lalb_Chr05g0213451 Lupinus albus HOM05D000119 ORTHO05D000054 6.2e-07 58.9 86 38.4
Ciclev10001979m.g Citrus clementina HOM05D000119 ORTHO05D000054 8.1e-07 58.5 188 33.0
COL.COLO4_10104 Corchorus olitorius HOM05D000119 ORTHO05D000054 8.1e-07 58.5 97 36.1
Psat0s2134g0040 Pisum sativum HOM05D000119 ORTHO05D000054 8.1e-07 58.5 103 35.9
CsaV3_2G035520 Cucumis sativus L. HOM05D000119 ORTHO05D000054 1.1e-06 58.2 71 47.9
Manes.18G042000 Manihot esculenta HOM05D000119 ORTHO05D000054 1.1e-06 58.2 91 38.5
MSTRG.15369 Avicennia marina HOM05D000119 ORTHO05D000054 1.4e-06 57.8 132 33.3
A02p36750 Brassica napus HOM05D000119 ORTHO05D000054 1.4e-06 57.8 82 46.3
BraA02t08668Z Brassica rapa HOM05D000119 ORTHO05D000054 1.4e-06 57.8 82 46.3
Rhsim06G0055400 Rhododendron simsii HOM05D000119 ORTHO05D000054 1.4e-06 57.8 79 41.8
FvH4_1g16770 Fragaria vesca HOM05D000119 ORTHO05D000054 1.8e-06 57.4 90 37.8
Potri.014G022500 Populus trichocarpa HOM05D000119 ORTHO05D000054 1.8e-06 57.4 190 29.5
TWI09G0285 Tripterygium wilfordii HOM05D000119 ORTHO05D000054 1.8e-06 57.4 109 33.9
Duzib041G0806 Durio zibethinus HOM05D000119 ORTHO05D000054 2.4e-06 57.0 95 34.7
VMungo1215G0669 Vigna mungo HOM05D000119 ORTHO05D000054 2.4e-06 57.0 87 37.9
Duzib093G1047 Durio zibethinus HOM05D000119 ORTHO05D000054 3.1e-06 56.6 98 36.7
ECA238G2921 Erigeron canadensis HOM05D000119 ORTHO05D000054 3.1e-06 56.6 73 42.5
CSS0029616 Camellia sinensis var. sinensis HOM05D000119 ORTHO05D000054 4.0e-06 56.2 85 38.8
CiPaw.01G012800 Carya illinoinensis HOM05D000119 ORTHO05D000054 4.0e-06 56.2 127 33.9
Gohir.D05G209501 Gossypium hirsutum HOM05D000119 ORTHO05D000054 4.0e-06 56.2 107 36.4
Gorai.009G215900 Gossypium raimondii HOM05D000119 ORTHO05D000054 4.0e-06 56.2 107 36.4
Potri.005G142600 Populus trichocarpa HOM05D000119 ORTHO05D000054 4.0e-06 56.2 89 40.4
Sabra05G0113700 Salix brachista HOM05D000119 ORTHO05D000054 4.0e-06 56.2 90 40.0
AL8G44030 Arabidopsis lyrata HOM05D000119 ORTHO05D000054 5.3e-06 55.8 95 41.1
BcaNung02532 Brassica carinata HOM05D000119 ORTHO05D000054 5.3e-06 55.8 94 40.4
A01p01710 Brassica napus HOM05D000119 ORTHO05D000054 5.3e-06 55.8 94 40.4
C01p01880 Brassica napus HOM05D000119 ORTHO05D000054 5.3e-06 55.8 94 40.4
BolC1t00180H Brassica oleracea HOM05D000119 ORTHO05D000054 5.3e-06 55.8 94 40.4
BraA01t00162Z Brassica rapa HOM05D000119 ORTHO05D000054 5.3e-06 55.8 94 40.4
Hma1.2p1_0240F.1_g100270 Hydrangea macrophylla HOM05D000119 ORTHO05D000054 5.3e-06 55.8 197 27.4
RcHm_v2.0_Chr2g0106671 Rosa chinensis HOM05D000119 ORTHO05D000054 5.3e-06 55.8 93 35.5
Cfa018051 Carpinus fangiana HOM05D000119 ORTHO05D000054 6.9e-06 55.5 87 37.9
Dinv26867 Davidia involucrata HOM05D000119 ORTHO05D000054 9.0e-06 55.1 126 28.6
Duzib187G0650 Durio zibethinus HOM05D000119 ORTHO05D000054 9.0e-06 55.1 75 38.7
Lalb_Chr09g0323401 Lupinus albus HOM05D000119 ORTHO05D000054 9.0e-06 55.1 85 37.6


User provided reference genes

Program Settings