Gene: AT5G67300

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G67300
  • Transcript Identifier AT5G67300.1
  • Gene Type Coding gene
  • Location Chr5 : 26854109-26855026 : positive

Gene Family Information

  • ID HOM05D000119
  • #Genes/#Species 2812/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G67300.1
  • symbol MYBR1
  • Alias ATMYB44,ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 44,ATMYBR1,MYB44
  • uniprot Q9FDW1

Descriptions

  • Description myb domain protein r1
  • Computational description myb domain protein r1 (MYBR1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 77 (TAIR:AT3G50060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009738
IEA
GOA Databaseabscisic acid-activated signaling pathway
GO:0006952
IEA
GOA Databasedefense response
GO:0010200
IEP
GOA Databaseresponse to chitin
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
IDA
IBA
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:0009408
IEP
Gene Ontologyresponse to heat3
GO:0010929
IDA
Gene Ontologypositive regulation of auxin mediated signaling pathway2
GO:2000031
IMP
Gene Ontologyregulation of salicylic acid mediated signaling pathway4
GO:2000022
IMP
Gene Ontologyregulation of jasmonic acid mediated signaling pathway4
GO:1900150
IMP
Gene Ontologyregulation of defense response to fungus4
GO:0050832
IEP
Gene Ontologydefense response to fungus4
GO:0042742
IMP
Gene Ontologydefense response to bacterium4
GO:0009753
IEP
Gene Ontologyresponse to jasmonic acid4
GO:0009751
IEP
Gene Ontologyresponse to salicylic acid4
GO:0009414
IEP
Gene Ontologyresponse to water deprivation5
GO:0009737
IMP
Gene Ontologyresponse to abscisic acid6
GO:0009651
IMP
Gene Ontologyresponse to salt stress6

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding1
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific1
GO:0042802
IPI
Gene Ontologyidentical protein binding7
GO:0000976
IDA, IPI
Gene Ontologytranscription cis-regulatory region binding4 8
GO:0043565
IDA
Gene Ontologysequence-specific DNA binding9
GO:0003700
IDA
ISS
Gene OntologyDNA-binding transcription factor activity4 10

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)