Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031113001 Vitis vinifera HOM05D007200 ORTHO05D009030 1.3e-154 549.7 273 100.0
TAR365G0906 Trochodendron aralioides HOM05D007200 ORTHO05D009030 1.2e-120 436.8 273 78.0
TAR365G0308 Trochodendron aralioides HOM05D007200 ORTHO05D009030 1.6e-120 436.4 273 78.0
QL03p012758 Quercus lobata HOM05D007200 ORTHO05D009030 3.6e-120 435.3 272 79.4
Ciclev10002020m.g Citrus clementina HOM05D007200 ORTHO05D009030 4.3e-118 428.3 277 75.8
Haze_04164 Corylus avellana HOM05D007200 ORTHO05D009030 3.7e-117 425.2 272 77.2
Nn3g21404 Nelumbo nucifera HOM05D007200 ORTHO05D009030 6.9e-116 421.0 278 75.9
Cfa006611 Carpinus fangiana HOM05D007200 ORTHO05D009030 7.7e-115 417.5 270 76.7
Manes.08G119500 Manihot esculenta HOM05D007200 ORTHO05D009030 7.7e-115 417.5 273 75.5
RcHm_v2.0_Chr3g0455321 Rosa chinensis HOM05D007200 ORTHO05D009030 7.7e-115 417.5 272 76.5
TWI12G0470 Tripterygium wilfordii HOM05D007200 ORTHO05D009030 7.7e-115 417.5 273 75.5
Lj9C128T5 Lonicera japonica HOM05D007200 ORTHO05D009030 2.9e-114 415.6 271 76.8
CSS0011307 Camellia sinensis var. sinensis HOM05D007200 ORTHO05D009030 1.1e-113 413.7 273 76.2
CANSAT54G2021 Cannabis sativa HOM05D007200 ORTHO05D009030 4.2e-113 411.8 274 74.8
Rhsim05G0141700 Rhododendron simsii HOM05D007200 ORTHO05D009030 4.2e-113 411.8 273 75.8
Glyma.10G153100 Glycine max HOM05D007200 ORTHO05D009030 9.4e-113 410.6 269 76.6
FvH4_6g06280 Fragaria vesca HOM05D007200 ORTHO05D009030 1.2e-112 410.2 276 75.0
Sabra05G0032400 Salix brachista HOM05D007200 ORTHO05D009030 2.1e-112 409.5 273 75.5
Aqoxy5G00700 Aquilegia oxysepala HOM05D007200 ORTHO05D009030 2.7e-112 409.1 271 73.1
Eucgr.B01933 Eucalyptus grandis HOM05D007200 ORTHO05D009030 3.6e-112 408.7 273 72.2
FAN14G1797 Fragaria x ananassa HOM05D007200 ORTHO05D009030 4.7e-112 408.3 276 74.6
Actinidia24645 Actinidia chinensis HOM05D007200 ORTHO05D009030 6.1e-112 407.9 274 74.5
MD12G1216700 Malus domestica HOM05D007200 ORTHO05D009030 6.1e-112 407.9 276 74.6
CiPaw.07G020000 Carya illinoinensis HOM05D007200 ORTHO05D009030 1.8e-111 406.4 272 73.9
FAN09G0829 Fragaria x ananassa HOM05D007200 ORTHO05D009030 2.3e-111 406.0 276 74.3
Lsat_1_v5_gn_9_87521 Lactuca sativa HOM05D007200 ORTHO05D009030 3.9e-111 405.2 270 74.1
Peaxi162Scf00071g00636 Petunia axillaris HOM05D007200 ORTHO05D009030 2.2e-109 399.4 275 73.1
Lj9C124T9 Lonicera japonica HOM05D007200 ORTHO05D009030 2.8e-109 399.1 295 69.5
VMungo0720G1786 Vigna mungo HOM05D007200 ORTHO05D009030 4.8e-109 398.3 252 77.8
Phvul.007G196200 Phaseolus vulgaris HOM05D007200 ORTHO05D009030 6.3e-109 397.9 253 77.5
Thecc.05G310900 Theobroma cacao HOM05D007200 ORTHO05D009030 8.2e-109 397.5 274 74.5
Duzib177G0869 Durio zibethinus HOM05D007200 ORTHO05D009030 3.1e-108 395.6 274 73.0
PGR083G0889 Punica granatum HOM05D007200 ORTHO05D009030 5.9e-107 391.3 276 71.7
Nitab4.5_0002420g0030 Nicotiana tabacum HOM05D007200 ORTHO05D009030 6.5e-106 387.9 274 69.7
Lalb_Chr21g0310651 Lupinus albus HOM05D007200 ORTHO05D009030 1.1e-105 387.1 254 76.8
Cpa.g.sc48.76 Carica papaya HOM05D007200 ORTHO05D009030 2.5e-105 386.0 272 70.6
ECA236G3394 Erigeron canadensis HOM05D007200 ORTHO05D009030 2.5e-105 386.0 273 71.1
HanXRQChr11g0339441 Helianthus annuus HOM05D007200 ORTHO05D009030 2.5e-105 386.0 271 73.4
Medtr1g083110 Medicago truncatula HOM05D007200 ORTHO05D009030 3.2e-105 385.6 273 72.2
Atru.chr12.1493 Acer truncatum HOM05D007200 ORTHO05D009030 4.2e-105 385.2 275 70.9
Gorai.007G298700 Gossypium raimondii HOM05D007200 ORTHO05D009030 4.2e-105 385.2 273 72.2
Prupe.6G323000 Prunus persica HOM05D007200 ORTHO05D009030 4.2e-105 385.2 256 74.6
Gohir.A11G266300 Gossypium hirsutum HOM05D007200 ORTHO05D009030 7.2e-105 384.4 273 72.2
AUR62005175 Chenopodium quinoa HOM05D007200 ORTHO05D009030 2.7e-104 382.5 273 70.0
PGSC0003DMG400007427 Solanum tuberosum HOM05D007200 ORTHO05D009030 8.0e-104 380.9 275 69.8
COL.COLO4_10491 Corchorus olitorius HOM05D007200 ORTHO05D009030 2.3e-103 379.4 253 75.1
Gohir.D11G276600 Gossypium hirsutum HOM05D007200 ORTHO05D009030 3.9e-103 378.6 273 71.1
AUR62000793 Chenopodium quinoa HOM05D007200 ORTHO05D009030 5.2e-103 378.3 274 69.7
arahy.Tifrunner.gnm1.ann1.PH9A9F Arachis hypogaea HOM05D007200 ORTHO05D009030 5.7e-102 374.8 251 76.1
CAN.G321.37 Capsicum annuum HOM05D007200 ORTHO05D009030 5.7e-102 374.8 252 71.8
Psat6g149880 Pisum sativum HOM05D007200 ORTHO05D009030 7.4e-102 374.4 270 71.1
DCAR_001939 Daucus carota HOM05D007200 ORTHO05D009030 2.2e-101 372.9 271 69.4
arahy.Tifrunner.gnm1.ann1.H2XQXC Arachis hypogaea HOM05D007200 ORTHO05D009030 3.7e-101 372.1 251 75.7
Thhalv10021289m.g Eutrema salsugineum HOM05D007200 ORTHO05D009030 8.2e-101 370.9 272 68.4
Lj5g0005198 Lotus japonicus HOM05D007200 ORTHO05D009030 3.1e-100 369.0 273 68.9
Solyc11g008480.2 Solanum lycopersicum HOM05D007200 ORTHO05D009030 5.3e-100 368.2 271 67.9
Aa31LG5G15970 Aethionema arabicum HOM05D007200 ORTHO05D009030 1.2e-99 367.1 272 67.6
THA.LOC104818708 Tarenaya hassleriana HOM05D007200 ORTHO05D009030 1.2e-99 367.1 271 68.3
TPR.G6036 Trifolium pratense HOM05D007200 ORTHO05D009030 1.2e-99 367.1 251 72.5
Sopen11g004260 Solanum pennellii HOM05D007200 ORTHO05D009030 2.0e-99 366.3 261 69.0
BcaC05g30148 Brassica carinata HOM05D007200 ORTHO05D009030 4.5e-99 365.2 272 67.3
Migut.O00553 Erythranthe guttata HOM05D007200 ORTHO05D009030 7.7e-99 364.4 269 69.1
CARHR079750 Cardamine hirsuta HOM05D007200 ORTHO05D009030 1.3e-98 363.6 272 67.6
Sed0020284 Sechium edule HOM05D007200 ORTHO05D009030 1.3e-98 363.6 257 69.6
BolC5t34842H Brassica oleracea HOM05D007200 ORTHO05D000438 2.2e-98 362.8 271 66.1
Carub.0003s0469 Capsella rubella HOM05D007200 ORTHO05D009030 2.9e-98 362.5 271 67.2
Migut.N01991 Erythranthe guttata HOM05D007200 ORTHO05D009030 3.8e-98 362.1 269 68.8
CsaV3_2G006520 Cucumis sativus L. HOM05D007200 ORTHO05D009030 5.0e-98 361.7 256 69.5
vmacro19623 Vaccinium macrocarpon HOM05D007200 ORTHO05D009030 6.5e-98 361.3 273 69.2
AL3G15960 Arabidopsis lyrata HOM05D007200 ORTHO05D009030 8.5e-98 360.9 272 66.5
BcaC05g30124 Brassica carinata HOM05D007200 ORTHO05D009030 2.5e-97 359.4 271 65.3
MBI19_g12813_MAGBIO Magnolia biondii HOM05D007200 ORTHO05D009030 2.5e-97 359.4 248 72.2
AT3G05410 Arabidopsis thaliana HOM05D007200 ORTHO05D009030 5.5e-97 358.2 252 69.4
Cc02_g31060 Coffea canephora HOM05D007200 ORTHO05D009030 5.5e-97 358.2 280 67.5
FAN02G4393 Fragaria x ananassa HOM05D007200 ORTHO05D009030 5.5e-97 358.2 277 67.9
Sp3g04270 Schrenkiella parvula HOM05D007200 ORTHO05D009030 7.2e-97 357.8 252 70.2
BraA05t23030Z Brassica rapa HOM05D007200 ORTHO05D009030 9.4e-97 357.5 272 65.4
Nitab4.5_0009303g0010 Nicotiana tabacum HOM05D007200 ORTHO05D009030 2.1e-96 356.3 274 67.2
EL10Ac4g09392 Beta vulgaris HOM05D007200 ORTHO05D009030 4.7e-96 355.1 273 65.2
MELO3C004233.2 Cucumis melo HOM05D007200 ORTHO05D009030 1.5e-94 350.1 259 67.2
PSO210G0998 Papaver somniferum HOM05D007200 ORTHO05D009030 1.5e-94 350.1 255 69.4
FAN05G3823 Fragaria x ananassa HOM05D000179 ORTHO05D009030 3.7e-93 345.5 225 77.3
Ah.04g160430 Amaranthus hybridus HOM05D007200 ORTHO05D009030 7.0e-92 341.3 273 64.5
MSTRG.27987 Avicennia marina HOM05D007200 ORTHO05D009030 2.7e-91 339.3 270 64.4
PSO832G2855 Papaver somniferum HOM05D007200 ORTHO05D009030 2.9e-90 335.9 255 67.8
SGA_v2.0_scaffold98G29315 Striga asiatica HOM05D007200 ORTHO05D009030 5.0e-90 335.1 270 64.1
CANSAT54G2778 Cannabis sativa HOM05D007200 ORTHO05D009030 4.2e-89 332.0 211 75.4
ATR0706G032 Amborella trichopoda HOM05D007200 ORTHO05D009030 2.1e-88 329.7 253 64.0
Zm00001eb142170 Zea mays HOM05D007200 ORTHO05D009030 1.8e-87 326.6 250 64.0
unitig_746.g26859 Utricularia gibba HOM05D004477 ORTHO05D005615 5.7e-86 321.6 254 62.2
CDE02G3507 Ceratophyllum demersum HOM05D007200 ORTHO05D009030 2.8e-85 319.3 278 59.7
BcaC05g30126 Brassica carinata HOM05D007200 ORTHO05D009030 1.8e-84 316.6 271 60.1
ClCG02G015570 Citrullus lanatus HOM05D007200 ORTHO05D009030 1.8e-84 316.6 259 62.9
Potri.005G027100 Populus trichocarpa HOM05D007200 ORTHO05D009030 3.8e-82 308.9 209 77.0
HPP92_006928 Vanilla planifolia HOM05D000065 ORTHO05D001606 9.5e-81 304.3 240 62.5
Os01g0934400 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 1.8e-63 246.9 179 67.6
AagrBONN_evm.TU.Sc2ySwM_228.2760 Anthoceros agrestis HOM05D007200 ORTHO05D009030 5.4e-60 235.3 252 46.8
Sc16g0008540 Simmondsia chinensis HOM05D007200 ORTHO05D009030 1.3e-58 230.7 169 69.2
Pp3c2_22000 Physcomitrium patens HOM05D007200 ORTHO05D009030 5.1e-58 228.8 243 49.4
Hund07085 Selenicereus undatus HOM05D007200 ORTHO05D009030 5.1e-58 228.8 169 68.6
Mapoly0092s0016 Marchantia polymorpha HOM05D007200 ORTHO05D009030 7.3e-57 224.9 249 46.2
SMO140G0101 Selaginella moellendorffii HOM05D007200 ORTHO05D009030 3.1e-55 219.5 242 46.7
CBR_g32304 Chara braunii HOM05D007200 ORTHO05D009030 6.6e-50 201.8 266 41.4
SGA_v2.0_scaffold95G28806 Striga asiatica HOM05D007200 ORTHO05D009030 9.6e-49 198.0 169 62.7
AUR62004827 Chenopodium quinoa HOM05D007200 ORTHO05D009030 1.7e-45 187.2 167 59.3
PRCOL_00003141 Prasinoderma coloniale HOM05D007200 ORTHO05D009030 2.1e-43 180.3 230 44.3
Cre09.g389578 Chlamydomonas reinhardtii HOM05D007200 ORTHO05D009030 5.1e-42 175.6 257 40.5
MCO07G015 Micromonas commoda HOM05D007200 ORTHO05D009030 4.9e-37 159.1 240 36.7
Oeu012109.1 Olea europaea HOM05D007200 ORTHO05D009030 2.3e-34 150.2 104 69.2
Actinidia19786 Actinidia chinensis HOM05D007200 ORTHO05D009030 8.7e-34 148.3 109 66.1
MD04G1202900 Malus domestica HOM05D007200 ORTHO05D009030 1.8e-26 124.0 120 59.2
C05p61820 Brassica napus HOM05D000205 ORTHO05D000438 1.6e-24 117.5 167 44.9
Os01g0934350 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 3.3e-17 93.2 71 57.7
AUR62032114 Chenopodium quinoa HOM05D002933 ORTHO05D007742 2.7e-11 73.6 235 23.8
AUR62039657 Chenopodium quinoa HOM05D002933 ORTHO05D007742 7.9e-11 72.0 231 23.8
Thecc.10G052500 Theobroma cacao HOM05D002933 ORTHO05D007742 1.0e-10 71.6 216 23.1
Ah.11g047550 Amaranthus hybridus HOM05D006809 ORTHO05D008609 1.3e-10 71.2 240 22.9
CAN.G1228.6 Capsicum annuum HOM05D002933 ORTHO05D007742 1.8e-10 70.9 115 34.8
Sc12g0007090 Simmondsia chinensis HOM05D002933 ORTHO05D007742 3.9e-10 69.7 267 22.8
Solyc03g114930.3 Solanum lycopersicum HOM05D002933 ORTHO05D007742 3.9e-10 69.7 192 24.5
Sopen03g034010 Solanum pennellii HOM05D002933 ORTHO05D007742 3.9e-10 69.7 192 24.5
PGSC0003DMG400024531 Solanum tuberosum HOM05D002933 ORTHO05D007742 3.9e-10 69.7 192 24.0
EL10Ac5g11164 Beta vulgaris HOM05D002933 ORTHO05D007742 5.1e-10 69.3 233 23.6
BcaC02g09745 Brassica carinata HOM05D002933 ORTHO05D007742 5.1e-10 69.3 115 32.2
BolC4t25275H Brassica oleracea HOM05D002933 ORTHO05D007742 5.1e-10 69.3 115 32.2
A04p04610 Brassica napus HOM05D002933 ORTHO05D007742 8.7e-10 68.6 115 32.2
BraA04t16171Z Brassica rapa HOM05D002933 ORTHO05D007742 8.7e-10 68.6 115 32.2
Hund09944 Selenicereus undatus HOM05D002933 ORTHO05D007742 8.7e-10 68.6 190 23.7
Carub.0005s2198 Capsella rubella HOM05D002933 ORTHO05D007742 1.1e-09 68.2 115 30.4
BcaB02g08429 Brassica carinata HOM05D002933 ORTHO05D007742 1.5e-09 67.8 115 31.3
Hund02566 Selenicereus undatus HOM05D002933 ORTHO05D007742 1.5e-09 67.8 191 24.1
Thhalv10010685m.g Eutrema salsugineum HOM05D002933 ORTHO05D007742 5.7e-09 65.9 115 31.3
Migut.B00505 Erythranthe guttata HOM05D002933 ORTHO05D007742 2.8e-08 63.5 233 21.9
Ciclev10032564m.g Citrus clementina HOM05D002933 ORTHO05D007742 3.7e-08 63.2 192 22.9


User provided reference genes

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