Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 7.6e-102 374.4 280 100.0
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 2.3e-50 203.4 291 70.4
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 8.9e-50 201.4 278 71.2
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 1.5e-49 200.7 280 66.4
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 4.4e-49 199.1 286 72.4
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 2.3e-45 186.8 283 61.5
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 2.9e-45 186.4 283 68.2
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 8.6e-45 184.9 282 69.1
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 4.3e-44 182.6 282 69.1
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 2.1e-43 180.3 280 66.4
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.1e-43 180.3 282 68.8
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 8.0e-43 178.3 282 67.0
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 3.1e-42 176.4 285 66.0
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 5.8e-41 172.2 286 67.8
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 2.9e-40 169.9 283 67.8
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 1.4e-39 167.5 281 68.3
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 3.2e-39 166.4 280 59.3
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 1.6e-38 164.1 288 64.9
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 2.0e-38 163.7 284 64.8
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 3.5e-38 162.9 280 67.5
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 7.8e-38 161.8 288 66.3
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 1.3e-37 161.0 286 63.3
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 1.3e-37 161.0 286 65.7
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 3.9e-37 159.5 260 52.7
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 8.6e-37 158.3 281 66.5
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 1.9e-36 157.1 237 75.5
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 2.5e-36 156.8 282 57.8
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 5.6e-36 155.6 259 66.0
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 5.6e-36 155.6 284 56.7
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 7.3e-36 155.2 284 56.7
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 9.5e-36 154.8 266 66.5
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 9.5e-36 154.8 283 57.2
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 1.2e-35 154.5 318 57.5
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 1.2e-35 154.5 282 62.1
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 6.2e-35 152.1 285 56.8
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 1.4e-34 151.0 284 62.3
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 3.1e-34 149.8 281 66.9
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 4.0e-34 149.4 281 62.6
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 1.5e-33 147.5 283 64.3
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 1.5e-33 147.5 285 58.6
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 4.4e-33 146.0 281 65.1
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 7.5e-33 145.2 283 64.3
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 7.5e-33 145.2 283 64.3
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 9.8e-33 144.8 285 58.2
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 1.7e-32 144.1 284 58.1
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 2.9e-32 143.3 283 64.3
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 3.7e-32 142.9 281 59.1
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 3.7e-32 142.9 286 62.9
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 4.9e-32 142.5 282 62.4
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 4.9e-32 142.5 285 63.9
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 8.3e-32 141.7 281 61.2
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 1.4e-31 141.0 280 62.5
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 7.1e-31 138.7 281 61.2
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 9.2e-31 138.3 283 61.1
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 1.6e-30 137.5 280 62.1
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.6e-30 137.5 282 60.3
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 2.1e-30 137.1 295 61.4
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 2.1e-30 137.1 240 62.5
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 3.5e-30 136.3 279 64.9
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 7.8e-30 135.2 294 61.6
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.0e-29 134.8 238 59.7
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 2.3e-29 133.7 286 58.0
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 3.0e-29 133.3 282 58.2
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 5.1e-29 132.5 128 69.5
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 5.1e-29 132.5 283 45.6
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.5e-28 131.0 285 53.3
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 4.3e-28 129.4 103 67.0
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 1.6e-27 127.5 150 67.3
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 2.1e-27 127.1 291 61.5
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 4.7e-27 125.9 281 59.4
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 1.1e-26 124.8 307 50.8
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 1.4e-26 124.4 281 35.6
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 1.8e-26 124.0 101 68.3
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 1.8e-26 124.0 101 68.3
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 1.8e-26 124.0 150 68.0
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 2.3e-26 123.6 311 45.3
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 3.1e-26 123.2 158 54.4
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 3.1e-26 123.2 282 55.7
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 5.2e-26 122.5 284 54.6
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.6e-25 120.2 283 51.9
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 5.8e-25 119.0 256 56.6
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 7.6e-25 118.6 249 65.5
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 4.9e-24 115.9 154 66.9
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 8.4e-24 115.2 280 59.6
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 5.4e-23 112.5 285 58.6
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 3.5e-22 109.8 243 64.6
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 1.7e-21 107.5 278 58.6
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.7e-21 107.5 285 57.9
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 3.0e-21 106.7 276 59.4
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 8.6e-21 105.1 276 59.1
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 2.5e-20 103.6 103 57.3
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 9.6e-20 101.7 276 58.7
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 1.6e-19 100.9 287 58.2
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 3.6e-19 99.8 284 56.3
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 6.2e-19 99.0 160 66.2
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 6.8e-18 95.5 102 52.9
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 6.8e-18 95.5 102 52.9
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 1.1e-15 88.2 288 54.2
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 6.0e-14 82.4 103 49.5
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 6.2e-11 72.4 52 61.5
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 1.5e-09 67.8 110 49.1
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 3.4e-09 66.6 102 46.1
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 1.7e-08 64.3 103 42.7
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 6.4e-08 62.4 199 35.7
Dinv28434 Davidia involucrata HOM05D000368 ORTHO05D000289 1.9e-07 60.8 69 49.3
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 7.1e-07 58.9 43 58.1
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.6e-06 57.8 94 40.4
CSS0015725 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 4.6e-06 56.2 62 53.2
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 6.0e-06 55.8 33 69.7


User provided reference genes

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