Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 3.5e-266 921.0 449 100.0
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 1.2e-200 703.4 476 74.6
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 2.1e-194 682.6 462 71.9
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 1.4e-193 679.9 473 71.5
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 1.8e-193 679.5 467 70.7
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 5.7e-192 674.5 446 73.1
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 3.5e-189 665.2 471 69.9
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 1.0e-188 663.7 452 71.7
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 2.3e-188 662.5 456 70.4
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 6.6e-188 661.0 456 70.2
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 5.5e-187 657.9 452 71.2
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 7.2e-187 657.5 450 71.8
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 1.4e-185 653.3 464 69.4
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 1.4e-185 653.3 451 70.7
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 2.3e-185 652.5 459 68.4
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 1.3e-183 646.7 457 70.0
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 4.5e-181 638.3 457 69.6
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 8.6e-180 634.0 470 68.5
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 5.6e-179 631.3 478 65.7
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 7.3e-179 630.9 481 66.5
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 1.2e-178 630.2 471 67.5
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 2.8e-178 629.0 463 69.1
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 4.7e-178 628.2 460 68.3
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 8.0e-178 627.5 475 65.5
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 3.0e-177 625.5 450 67.8
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 5.8e-176 621.3 476 66.0
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 3.7e-175 618.6 466 66.5
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.9e-174 616.3 478 64.2
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 1.6e-173 613.2 428 71.3
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 1.6e-173 613.2 479 65.3
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 1.6e-173 613.2 444 67.8
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 6.0e-173 611.3 444 67.3
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 7.8e-173 610.9 466 66.7
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 2.3e-172 609.4 455 67.0
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.9e-171 606.3 456 66.4
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 2.5e-171 605.9 457 65.6
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 3.3e-171 605.5 449 66.4
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 4.7e-170 601.7 465 65.6
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 8.0e-170 600.9 443 66.1
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 8.0e-170 600.9 457 64.6
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 1.8e-169 599.7 451 66.3
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 3.4e-168 595.5 449 64.6
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 9.8e-168 594.0 443 65.5
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 2.2e-167 592.8 403 73.0
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 1.1e-166 590.5 458 64.0
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 7.0e-166 587.8 461 63.1
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 9.2e-166 587.4 449 65.3
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 1.2e-165 587.0 517 59.8
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 2.1e-165 586.3 449 65.7
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 2.1e-165 586.3 449 65.7
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 4.6e-165 585.1 458 63.1
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 6.0e-165 584.7 458 63.1
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 5.1e-164 581.6 445 64.3
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 6.6e-164 581.3 454 64.8
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 8.6e-164 580.9 449 63.9
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.2e-162 577.0 478 62.3
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 1.2e-162 577.0 475 60.8
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 1.2e-162 577.0 456 63.2
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 2.8e-162 575.9 455 62.6
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 3.6e-162 575.5 448 62.9
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 3.6e-162 575.5 457 63.2
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 3.6e-162 575.5 457 63.2
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 8.1e-162 574.3 464 64.0
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 8.1e-162 574.3 458 62.2
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 3.1e-161 572.4 450 62.9
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 5.2e-161 571.6 475 62.3
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 5.2e-161 571.6 443 64.8
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 5.2e-161 571.6 458 64.0
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 8.9e-161 570.9 459 61.4
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 1.5e-160 570.1 488 59.8
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 1.5e-160 570.1 457 62.4
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 1.7e-159 566.6 458 62.2
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 1.7e-159 566.6 494 58.5
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 2.2e-159 566.2 457 62.1
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 2.9e-159 565.8 452 62.2
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 4.9e-159 565.1 458 62.7
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 6.4e-159 564.7 458 62.0
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 1.9e-158 563.1 493 57.6
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 4.1e-158 562.0 477 60.2
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 4.1e-158 562.0 457 61.9
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 4.7e-154 548.5 411 68.6
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 1.3e-151 540.4 458 62.4
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 3.2e-150 535.8 470 57.7
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 6.0e-149 531.6 441 61.7
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 8.4e-143 511.1 493 54.4
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 8.4e-143 511.1 439 59.7
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 1.9e-142 510.0 349 71.9
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 1.6e-141 506.9 471 55.6
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 3.0e-140 502.7 355 70.4
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 1.9e-139 500.0 333 73.6
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 1.3e-138 497.3 412 60.9
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 9.9e-136 487.6 360 68.6
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 1.3e-135 487.3 386 64.5
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 1.6e-133 480.3 385 63.9
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 1.8e-132 476.9 441 54.0
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 2.0e-128 463.4 449 55.9
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 2.8e-114 416.4 356 57.0
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 2.5e-107 393.3 287 68.3
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.7e-106 390.6 450 45.6
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 2.0e-104 383.6 449 45.0
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 2.0e-104 383.6 513 40.9
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 2.9e-103 379.8 350 57.1
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 3.9e-100 369.4 491 40.5
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.1e-91 341.3 458 39.7
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 1.3e-90 337.8 444 45.0
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 2.7e-77 293.5 446 39.9
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 3.9e-63 246.5 240 53.8
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 1.1e-52 211.8 468 30.8
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 2.5e-46 190.7 237 46.8
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.2e-45 188.3 157 63.1
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.3e-44 184.1 157 63.1
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 1.2e-43 181.8 476 30.5
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 4.9e-42 176.4 249 39.8
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 3.2e-41 173.7 278 38.1
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 9.6e-22 109.0 95 51.6
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 2.1e-21 107.8 214 36.0
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 7.6e-19 99.4 68 66.2
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 2.9e-18 97.4 116 43.1
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.4e-17 95.1 81 61.7
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 3.2e-17 94.0 81 66.7
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 1.6e-16 91.7 260 26.5
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 1.8e-15 88.2 107 45.8
CSS0016884 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.2e-08 65.5 65 55.4
CSS0037496 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.2e-08 65.5 65 55.4
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.6e-08 65.1 66 57.6
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 2.7e-08 64.3 46 60.9
CiPaw.04G074200 Carya illinoinensis HOM05D006132 ORTHO05D007305 1.9e-06 58.2 75 44.0


User provided reference genes

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