Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01027606001 Vitis vinifera HOM05D005813 ORTHO05D007310 3.4e-261 904.4 450 100.0
Duzib138G0196 Durio zibethinus HOM05D005813 ORTHO05D007310 1.7e-191 672.9 411 79.3
PGR031G3848 Punica granatum HOM05D005813 ORTHO05D007310 2.5e-187 659.1 416 76.9
Duzib133G0639 Durio zibethinus HOM05D005813 ORTHO05D007310 5.6e-187 657.9 411 78.3
Manes.05G045300 Manihot esculenta HOM05D005813 ORTHO05D007310 1.6e-186 656.4 410 78.0
TWI59G1428 Tripterygium wilfordii HOM05D005813 ORTHO05D007310 6.1e-186 654.4 407 79.4
CiPaw.02G167800 Carya illinoinensis HOM05D005813 ORTHO05D007310 1.5e-184 649.8 412 79.1
Thecc.01G376600 Theobroma cacao HOM05D005813 ORTHO05D007310 1.5e-184 649.8 411 77.1
CiPaw.01G262200 Carya illinoinensis HOM05D005813 ORTHO05D007310 2.0e-184 649.4 412 78.9
CsaV3_3G009700 Cucumis sativus L. HOM05D005813 ORTHO05D007310 2.2e-183 646.0 410 77.1
Lj1g0017617 Lotus japonicus HOM05D005813 ORTHO05D007310 2.9e-183 645.6 417 76.7
MELO3C006191.2 Cucumis melo HOM05D005813 ORTHO05D007310 6.4e-183 644.4 410 76.8
QL08p052527 Quercus lobata HOM05D005813 ORTHO05D007310 1.1e-182 643.7 412 78.6
ClCG05G002290 Citrullus lanatus HOM05D005813 ORTHO05D007310 1.9e-182 642.9 417 76.0
Prupe.2G145000 Prunus persica HOM05D005813 ORTHO05D007310 4.1e-182 641.7 417 76.0
Cfa001724 Carpinus fangiana HOM05D005813 ORTHO05D007310 5.4e-182 641.3 408 78.9
arahy.Tifrunner.gnm1.ann1.4B5N4V Arachis hypogaea HOM05D005813 ORTHO05D007310 7.0e-182 641.0 419 74.2
Ciclev10020183m.g Citrus clementina HOM05D005813 ORTHO05D007310 1.2e-181 640.2 412 76.0
arahy.Tifrunner.gnm1.ann1.DKE7V3 Arachis hypogaea HOM05D005813 ORTHO05D007310 2.0e-181 639.4 419 73.7
CSS0030666 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 7.8e-181 637.5 417 77.2
CSS0042195 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 7.8e-181 637.5 417 77.2
Glyma.09G269300 Glycine max HOM05D005813 ORTHO05D007310 7.8e-181 637.5 413 75.5
Gohir.A08G031100 Gossypium hirsutum HOM05D005813 ORTHO05D007310 1.0e-180 637.1 412 75.2
Sabra02G0115400 Salix brachista HOM05D005813 ORTHO05D007310 3.0e-180 635.6 411 76.6
Glyma.18G220700 Glycine max HOM05D005813 ORTHO05D007310 3.9e-180 635.2 415 74.5
Potri.014G069400 Populus trichocarpa HOM05D005813 ORTHO05D007310 5.0e-180 634.8 411 76.2
TAR374G0529 Trochodendron aralioides HOM05D005813 ORTHO05D007310 1.5e-179 633.3 412 77.2
Sabra02G0117100 Salix brachista HOM05D005813 ORTHO05D007310 1.9e-179 632.9 411 76.2
MBI04_g35272_MAGBIO Magnolia biondii HOM05D005813 ORTHO05D007310 5.6e-179 631.3 413 75.8
Nn1g01240 Nelumbo nucifera HOM05D005813 ORTHO05D007310 7.3e-179 630.9 406 76.6
Lalb_Chr03g0039571 Lupinus albus HOM05D005813 ORTHO05D007310 2.1e-178 629.4 410 74.9
Gohir.D08G042200 Gossypium hirsutum HOM05D005813 ORTHO05D007310 1.1e-177 627.1 412 74.3
Eucgr.D02453 Eucalyptus grandis HOM05D005813 ORTHO05D007310 1.4e-177 626.7 416 73.6
Ca_11657_v3 Cicer arietinum L. HOM05D005813 ORTHO05D007310 3.1e-177 625.5 418 74.2
FAN10G1195 Fragaria x ananassa HOM05D005813 ORTHO05D007310 3.1e-177 625.5 412 74.8
CANSAT56G4177 Cannabis sativa HOM05D005813 ORTHO05D007310 4.0e-177 625.2 409 72.6
THA.LOC104817009 Tarenaya hassleriana HOM05D005813 ORTHO05D007310 5.2e-177 624.8 407 75.7
Sc02g0002610 Simmondsia chinensis HOM05D005813 ORTHO05D007310 6.8e-177 624.4 406 74.4
Nn4g26391 Nelumbo nucifera HOM05D005813 ORTHO05D007310 2.0e-176 622.9 408 75.7
Hund27345 Selenicereus undatus HOM05D005813 ORTHO05D007310 4.4e-176 621.7 410 73.9
Dinv43710 Davidia involucrata HOM05D005813 ORTHO05D007310 5.8e-176 621.3 397 78.8
Phvul.008G076400 Phaseolus vulgaris HOM05D005813 ORTHO05D007310 7.5e-176 620.9 411 74.5
Sed0000354 Sechium edule HOM05D005813 ORTHO05D007310 9.8e-176 620.5 412 73.3
FvH4_7g11840 Fragaria vesca HOM05D005813 ORTHO05D007310 1.7e-175 619.8 412 74.3
FAN06G0614 Fragaria x ananassa HOM05D005813 ORTHO05D007310 1.7e-175 619.8 412 74.3
Cpa.g.sc18.111 Carica papaya HOM05D005813 ORTHO05D007310 2.9e-175 619.0 411 75.2
FAN01G0479 Fragaria x ananassa HOM05D005813 ORTHO05D007310 3.7e-175 618.6 417 73.9
Lj7A528T62 Lonicera japonica HOM05D005813 ORTHO05D007310 1.1e-174 617.1 412 74.3
Haze_16813 Corylus avellana HOM05D005813 ORTHO05D007310 1.4e-174 616.7 404 76.7
Potri.002G148100 Populus trichocarpa HOM05D005813 ORTHO05D007310 2.4e-174 615.9 410 73.7
TPR.G29407 Trifolium pratense HOM05D005813 ORTHO05D007310 5.4e-174 614.8 412 74.0
FAN10G2798 Fragaria x ananassa HOM05D005813 ORTHO05D007310 7.0e-174 614.4 412 73.8
MD02G1204700 Malus domestica HOM05D005813 ORTHO05D007310 7.0e-174 614.4 419 73.5
Cc02_g23900 Coffea canephora HOM05D005813 ORTHO05D007310 1.6e-173 613.2 410 74.6
VMungo1383G1345 Vigna mungo HOM05D005813 ORTHO05D007310 2.1e-173 612.8 411 74.0
MSTRG.17192 Avicennia marina HOM05D005813 ORTHO05D007310 1.0e-172 610.5 414 73.2
Sed0028100 Sechium edule HOM05D005813 ORTHO05D007310 1.0e-172 610.5 417 73.1
Medtr7g074890 Medicago truncatula HOM05D005813 ORTHO05D007310 1.7e-172 609.8 413 73.8
CARHR248130 Cardamine hirsuta HOM05D005813 ORTHO05D007310 2.3e-172 609.4 412 72.6
FAN06G1564 Fragaria x ananassa HOM05D005813 ORTHO05D007310 3.0e-172 609.0 424 71.9
Gorai.004G040800 Gossypium raimondii HOM05D005813 ORTHO05D007310 8.6e-172 607.4 458 67.0
RcHm_v2.0_Chr1g0350521 Rosa chinensis HOM05D005813 ORTHO05D007310 8.6e-172 607.4 418 73.4
Atru.chr5.306 Acer truncatum HOM05D005813 ORTHO05D007310 1.1e-171 607.1 413 75.1
Gohir.A08G134600 Gossypium hirsutum HOM05D005813 ORTHO05D007310 1.1e-171 607.1 411 72.7
SGA_v2.0_scaffold153G37009 Striga asiatica HOM05D005813 ORTHO05D007310 1.5e-171 606.7 418 71.5
Nitab4.5_0004917g0040 Nicotiana tabacum HOM05D005813 ORTHO05D007310 1.6e-170 603.2 418 73.0
Sp6g00150 Schrenkiella parvula HOM05D005813 ORTHO05D007310 1.6e-170 603.2 411 72.3
Migut.B01633 Erythranthe guttata HOM05D005813 ORTHO05D007310 2.8e-170 602.4 412 72.3
AL6G53420 Arabidopsis lyrata HOM05D005813 ORTHO05D007310 3.6e-170 602.1 413 71.4
Gohir.D08G155500 Gossypium hirsutum HOM05D005813 ORTHO05D007310 6.2e-170 601.3 411 72.3
Gorai.004G161700 Gossypium raimondii HOM05D005813 ORTHO05D007310 6.2e-170 601.3 411 72.3
C09p00110 Brassica napus HOM05D005813 ORTHO05D007310 8.1e-170 600.9 411 71.3
BraA09t35685Z Brassica rapa HOM05D005813 ORTHO05D007310 8.1e-170 600.9 411 71.3
AT4G00090 Arabidopsis thaliana HOM05D005813 ORTHO05D007310 1.4e-169 600.1 413 71.2
Ah.05g174210 Amaranthus hybridus HOM05D005813 ORTHO05D007310 2.3e-169 599.4 414 69.8
BcaB01g02210 Brassica carinata HOM05D005813 ORTHO05D007310 3.1e-169 599.0 411 70.3
BcaC04g24202 Brassica carinata HOM05D005813 ORTHO05D007310 3.1e-169 599.0 411 70.8
BolC9t52946H Brassica oleracea HOM05D005813 ORTHO05D007310 3.1e-169 599.0 411 70.8
Carub.0006s3714 Capsella rubella HOM05D005813 ORTHO05D007310 8.9e-169 597.4 411 71.3
Thhalv10028676m.g Eutrema salsugineum HOM05D005813 ORTHO05D007310 1.2e-168 597.0 411 71.5
PSO478G4467 Papaver somniferum HOM05D005813 ORTHO05D007310 2.0e-168 596.3 410 73.4
Solyc01g091310.3 Solanum lycopersicum HOM05D005813 ORTHO05D007310 2.6e-168 595.9 420 70.5
AUR62004213 Chenopodium quinoa HOM05D005813 ORTHO05D007310 7.5e-168 594.3 415 69.6
PSO782G1692 Papaver somniferum HOM05D005813 ORTHO05D007310 9.9e-168 594.0 429 70.9
FAN03G1318 Fragaria x ananassa HOM05D005813 ORTHO05D007310 1.3e-167 593.6 398 74.1
EL10Ac1g00888 Beta vulgaris HOM05D005813 ORTHO05D007310 2.2e-167 592.8 412 69.7
Lsat_1_v5_gn_7_7160 Lactuca sativa HOM05D005813 ORTHO05D007310 4.1e-166 588.6 413 72.9
HanXRQChr04g0122421 Helianthus annuus HOM05D005813 ORTHO05D007310 7.1e-166 587.8 417 72.2
unitig_749.g14372 Utricularia gibba HOM05D005813 ORTHO05D007310 1.7e-164 583.2 415 69.6
Aa31LG5G9310 Aethionema arabicum HOM05D005813 ORTHO05D007310 6.6e-164 581.3 441 66.9
Sopen01g037050 Solanum pennellii HOM05D005813 ORTHO05D007310 2.5e-163 579.3 421 69.1
Aqoxy7G00631 Aquilegia oxysepala HOM05D005813 ORTHO05D007310 3.3e-163 578.9 406 71.9
Oeu055488.1 Olea europaea HOM05D005813 ORTHO05D007310 4.7e-162 575.1 440 66.1
ATR0810G089 Amborella trichopoda HOM05D005813 ORTHO05D007310 6.2e-162 574.7 407 70.0
SalBow5G4545 Salvia bowleyana HOM05D005813 ORTHO05D007310 6.2e-162 574.7 415 69.4
MD07G1121300 Malus domestica HOM05D005813 ORTHO05D007310 1.5e-160 570.1 420 70.7
unitig_76.g29089 Utricularia gibba HOM05D005813 ORTHO05D007310 1.3e-159 567.0 400 70.5
Peaxi162Scf00013g03441 Petunia axillaris HOM05D005813 ORTHO05D007310 7.8e-157 557.8 399 71.7
Rhsim01G0147300 Rhododendron simsii HOM05D005813 ORTHO05D007310 1.7e-156 556.6 433 65.8
CDE11G1084 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 9.6e-155 550.8 406 68.5
CDE09G1050 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 1.2e-154 550.4 405 68.4
vmacro21010 Vaccinium macrocarpon HOM05D005813 ORTHO05D007310 2.4e-153 546.2 426 66.9
Actinidia12685 Actinidia chinensis HOM05D005813 ORTHO05D007310 9.3e-150 534.3 418 68.7
Nitab4.5_0000457g0240 Nicotiana tabacum HOM05D005813 ORTHO05D007310 1.2e-149 533.9 361 73.4
AUR62013635 Chenopodium quinoa HOM05D005813 ORTHO05D007310 8.7e-148 527.7 426 62.9
Psat3g115920 Pisum sativum HOM05D005813 ORTHO05D007310 1.9e-147 526.6 416 65.6
SEGI_07293 Sequoiadendron giganteum HOM05D005813 ORTHO05D007310 1.6e-146 523.5 405 64.7
Zm00001eb065090 Zea mays HOM05D005813 ORTHO05D007310 9.9e-144 514.2 404 65.1
COL.COLO4_12543 Corchorus olitorius HOM05D005813 ORTHO05D007310 9.3e-142 507.7 411 64.7
HPP92_003519 Vanilla planifolia HOM05D005813 ORTHO05D007310 4.8e-138 495.4 340 69.4
Mapoly0037s0016 Marchantia polymorpha HOM05D005813 ORTHO05D007310 9.0e-129 464.5 411 56.9
Pp3c19_7620 Physcomitrium patens HOM05D005813 ORTHO05D007310 8.7e-124 448.0 422 55.9
AagrBONN_evm.TU.Sc2ySwM_117.33 Anthoceros agrestis HOM05D005813 ORTHO05D007310 5.7e-123 445.3 430 55.3
DCAR_015903 Daucus carota HOM05D005813 ORTHO05D007310 3.8e-119 432.6 330 65.8
SHI01708 Sapria himalayana HOM05D005813 ORTHO05D007310 3.0e-116 422.9 396 54.8
Psat3g202640 Pisum sativum HOM05D005813 ORTHO05D007310 1.4e-113 414.1 295 69.2
A09p00750 Brassica napus HOM05D005813 ORTHO05D007310 3.1e-113 412.9 253 75.9
PGSC0003DMG400012776 Solanum tuberosum HOM05D005813 ORTHO05D007310 7.7e-112 408.3 252 77.4
SMO367G0685 Selaginella moellendorffii HOM05D005813 ORTHO05D007310 1.3e-111 407.5 341 56.9
PSO170G3521 Papaver somniferum HOM05D005813 ORTHO05D007310 2.6e-107 393.3 349 57.9
CBR_g23070 Chara braunii HOM05D005813 ORTHO05D007310 4.8e-106 389.0 386 52.6
PSO782G5041 Papaver somniferum HOM05D005813 ORTHO05D007310 7.7e-104 381.7 306 62.1
CBR_g21297 Chara braunii HOM05D005813 ORTHO05D007310 1.8e-100 370.5 433 47.1
PSO675G1684 Papaver somniferum HOM05D005813 ORTHO05D007310 1.5e-78 297.7 221 63.8
Actinidia33466 Actinidia chinensis HOM05D005813 ORTHO05D007310 4.3e-70 269.6 153 84.3
PSO478G0826 Papaver somniferum HOM05D005813 ORTHO05D007310 4.9e-58 229.6 148 75.7
Cre02.g102450 Chlamydomonas reinhardtii HOM05D005813 ORTHO05D007310 3.5e-48 196.8 391 33.5
MCO05G082 Micromonas commoda HOM05D005813 ORTHO05D007310 2.1e-40 171.0 342 34.2
PSO478G4170 Papaver somniferum HOM05D005813 ORTHO05D007310 6.4e-26 122.9 112 56.2
MELO3C031411.2 Cucumis melo HOM05D000544 ORTHO05D169468 8.4e-10 69.3 38 81.6
ATR0705G066 Amborella trichopoda HOM05D004669 ORTHO05D005767 4.2e-09 67.0 202 24.8
MCO13G313 Micromonas commoda HOM05D004669 ORTHO05D005767 5.5e-09 66.6 194 25.8
CSS0030600 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 3.5e-08 63.9 72 56.9
MELO3C029166.2 Cucumis melo HOM05D005813 ORTHO05D009576 1.3e-07 62.0 57 52.6
Hund06583 Selenicereus undatus HOM05D004669 ORTHO05D005767 1.3e-07 62.0 202 25.2
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 2.3e-07 61.2 332 21.7
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 3.0e-07 60.8 332 21.1
Cre06.g254150 Chlamydomonas reinhardtii HOM05D004669 ORTHO05D005767 6.7e-07 59.7 193 23.8
ClCG04G009490 Citrullus lanatus HOM05D005316 ORTHO05D006495 1.1e-06 58.9 178 27.0
CDE04G1486 Ceratophyllum demersum HOM05D004669 ORTHO05D005767 1.5e-06 58.5 202 23.8
MELO3C024484.2 Cucumis melo HOM05D005316 ORTHO05D006495 1.5e-06 58.5 178 27.5
MELO3C030776.2 Cucumis melo HOM05D005813 ORTHO05D007310 1.5e-06 58.5 35 68.6
Zm00001eb293800 Zea mays HOM05D004669 ORTHO05D005767 1.9e-06 58.2 202 23.8
CBR_g19153 Chara braunii HOM05D005717 ORTHO05D007221 2.5e-06 57.8 265 24.2
Solyc03g120080.4 Solanum lycopersicum HOM05D004669 ORTHO05D005767 3.3e-06 57.4 210 22.4
Sopen03g038950 Solanum pennellii HOM05D004669 ORTHO05D005767 3.3e-06 57.4 210 22.4
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 4.3e-06 57.0 332 21.4
GSVIVG01008170001 Vitis vinifera HOM05D005717 ORTHO05D007221 4.3e-06 57.0 192 25.5
CSS0009653 Camellia sinensis var. sinensis HOM05D004669 ORTHO05D005767 5.7e-06 56.6 193 22.8
Cfa002013 Carpinus fangiana HOM05D004669 ORTHO05D005767 7.4e-06 56.2 202 23.3
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 7.4e-06 56.2 332 21.7
MD17G1203900 Malus domestica HOM05D004669 ORTHO05D005767 7.4e-06 56.2 202 23.3
Ah.08g209920 Amaranthus hybridus HOM05D004669 ORTHO05D005767 9.7e-06 55.8 210 22.9
QL05p027590 Quercus lobata HOM05D004669 ORTHO05D005767 9.7e-06 55.8 202 23.3
PGSC0003DMG400005691 Solanum tuberosum HOM05D004669 ORTHO05D005767 9.7e-06 55.8 210 21.9


User provided reference genes

Program Settings