Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 5.3e-133 477.6 230 100.0
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 4.6e-113 411.4 207 89.9
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 7.9e-113 410.6 210 89.0
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 1.0e-112 410.2 210 87.6
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 3.0e-112 408.7 210 88.1
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 8.7e-112 407.1 207 89.4
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 3.3e-111 405.2 206 89.3
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 4.3e-111 404.8 207 88.9
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 7.4e-111 404.1 214 86.4
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 9.7e-111 403.7 209 88.5
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 2.4e-109 399.1 210 86.2
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 6.9e-109 397.5 207 86.0
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 9.0e-109 397.1 210 84.8
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 5.9e-108 394.4 210 84.3
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 7.7e-108 394.0 212 84.0
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 1.7e-107 392.9 210 84.3
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 3.8e-107 391.7 214 84.6
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 5.0e-107 391.3 208 85.1
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 6.5e-107 391.0 225 80.4
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 1.9e-106 389.4 201 87.1
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 3.2e-106 388.7 212 85.8
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 9.4e-106 387.1 210 84.8
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 2.1e-105 386.0 208 85.6
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 2.7e-105 385.6 210 82.9
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 1.0e-104 383.6 208 82.7
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 2.3e-104 382.5 210 81.9
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 3.9e-104 381.7 213 81.7
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 3.9e-104 381.7 225 79.1
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 5.1e-104 381.3 210 84.8
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 4.3e-103 378.3 210 80.5
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 5.7e-103 377.9 208 85.1
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 1.3e-102 376.7 210 82.4
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 4.8e-102 374.8 201 86.1
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 4.8e-102 374.8 199 86.9
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.1e-101 373.6 200 86.5
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 1.1e-101 373.6 210 80.5
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 1.8e-101 372.9 206 82.5
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 3.1e-101 372.1 224 77.7
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 4.1e-101 371.7 210 81.9
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 5.3e-101 371.3 199 83.4
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 5.3e-101 371.3 210 81.0
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 2.6e-100 369.0 208 80.8
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 3.4e-100 368.6 210 79.5
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 5.9e-100 367.9 208 79.8
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 7.7e-100 367.5 221 76.5
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 1.0e-99 367.1 212 80.2
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 1.0e-99 367.1 206 83.0
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 1.3e-99 366.7 208 79.8
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 1.7e-99 366.3 186 90.3
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 2.2e-99 365.9 241 72.2
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 2.9e-99 365.5 228 74.1
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 2.9e-99 365.5 208 79.3
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 3.8e-99 365.2 208 79.3
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 3.8e-99 365.2 208 79.3
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 2.5e-98 362.5 200 84.0
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 2.5e-98 362.5 230 74.3
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 9.4e-98 360.5 200 79.5
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 3.0e-96 355.5 210 79.5
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 3.9e-96 355.1 206 79.1
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 3.9e-96 355.1 210 78.1
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 6.7e-96 354.4 206 75.7
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 1.5e-95 353.2 212 76.9
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 1.5e-95 353.2 210 76.7
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 2.6e-95 352.4 209 77.0
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 4.4e-95 351.7 207 73.4
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 9.7e-95 350.5 232 73.7
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 2.8e-94 349.0 206 78.2
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 3.7e-94 348.6 232 73.3
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 3.7e-94 348.6 212 76.9
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 3.7e-94 348.6 210 77.6
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 6.3e-94 347.8 191 82.7
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 8.2e-94 347.4 207 72.9
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 1.8e-93 346.3 210 75.2
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 2.4e-93 345.9 191 82.7
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 3.1e-93 345.5 210 76.7
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 5.3e-93 344.7 232 72.4
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 5.3e-93 344.7 210 74.8
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 2.2e-91 339.3 232 71.1
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 9.4e-90 334.0 191 83.2
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 4.7e-89 331.6 191 80.1
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 6.7e-88 327.8 197 80.2
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 3.7e-86 322.0 181 84.0
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 4.8e-86 321.6 181 81.8
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 1.8e-85 319.7 181 81.8
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 2.6e-79 299.3 218 66.1
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 5.7e-79 298.1 228 58.3
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 5.7e-79 298.1 228 58.3
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 7.5e-79 297.7 228 58.3
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 1.6e-76 290.0 162 82.1
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 7.7e-76 287.7 151 88.7
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 2.2e-75 286.2 209 62.7
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 6.1e-73 278.1 151 86.8
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 5.2e-72 275.0 201 64.2
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 1.2e-68 263.8 160 78.1
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 2.5e-66 256.1 187 67.4
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 5.5e-66 255.0 213 62.0
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 2.1e-65 253.1 136 83.8
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 5.9e-60 235.0 230 48.7
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 5.2e-56 221.9 122 84.4
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 3.2e-53 212.6 115 80.9
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 8.9e-48 194.5 117 79.5
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 8.3e-46 188.0 98 85.7
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 1.7e-43 180.3 195 46.2
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.7e-43 180.3 98 81.6
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 3.9e-43 179.1 97 86.6
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 2.5e-42 176.4 97 83.5
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.1e-40 171.0 90 82.2
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 2.4e-32 143.3 194 44.3
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 3.1e-32 142.9 85 77.6
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 1.7e-30 137.1 174 40.2
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 2.2e-30 136.7 98 65.3
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 4.6e-28 129.0 70 80.0
MCO12G281 Micromonas commoda HOM05D006173 ORTHO05D007685 2.1e-17 93.6 199 28.6
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 3.1e-16 89.7 57 75.4
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 9.0e-16 88.2 52 76.9
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 6.4e-14 82.0 60 61.7


User provided reference genes

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